COL28A1 (collagen type XXVIII alpha 1 chain)

Gene: COL28A1 (collagen type XXVIII alpha 1 chain) Sus scrofa

Analyze

Symbol:

COL28A1

Name:

collagen type XXVIII alpha 1 chain

RGD ID:

14112392

Description:

ENCODES a protein that exhibits extracellular matrix structural constituent conferring tensile strength (inferred); serine-type endopeptidase inhibitor activity (inferred); INVOLVED IN cell adhesion (inferred); extracellular matrix organization (inferred); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN basement membrane (inferred); collagen trimer (inferred); collagen-containing extracellular matrix (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

collagen alpha-1(XXVIII) chain

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	77,666,282 - 77,833,806 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	77,670,890 - 77,841,939 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	85,201,979 - 85,497,584 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IBA,IEA)

collagen fibril organization (IBA)

extracellular matrix organization (IEA)

Cellular Component

basement membrane (IEA)

collagen trimer (IEA)

collagen type V trimer (IBA)

collagen-containing extracellular matrix (IBA,IEA)

extracellular space (IBA,IEA)

Molecular Function

extracellular matrix structural constituent conferring tensile strength (IBA,IEA)

heparin binding (IBA)

serine-type endopeptidase inhibitor activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

COL28A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	77,666,282 - 77,833,806 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	77,670,890 - 77,841,939 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	85,201,979 - 85,497,584 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COL28A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	7,338,194 - 7,543,870 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	7,356,203 - 7,535,873 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	7,397,506 - 7,575,504 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	7,364,769 - 7,541,985 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	7,367,965 - 7,545,230 (-)	NCBI		Celera
Cytogenetic Map	7	p21.3	NCBI
HuRef	7	7,246,816 - 7,425,461 (-)	NCBI		HuRef
CHM1_1	7	7,398,239 - 7,575,464 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	7,477,054 - 7,655,035 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	7,445,378 - 7,622,650 (-)	NCBI

Col28a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	7,997,100 - 8,193,709 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	7,997,808 - 8,192,617 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	7,997,100 - 8,193,709 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	7,997,808 - 8,192,617 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	7,947,808 - 8,142,617 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	7,947,808 - 8,142,617 (-)	NCBI		MGSCv36	mm8
Celera	6	8,140,497 - 8,334,541 (-)	NCBI		Celera
Cytogenetic Map	6	A1	NCBI
cM Map	6	3.44	NCBI

Col28a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	37,036,303 - 37,189,435 (-)	NCBI		GRCr8
mRatBN7.2	4	36,069,980 - 36,223,128 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	36,069,970 - 36,223,220 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	4	34,048,074 - 34,198,558 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	34,048,533 - 34,194,764 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	33,904,586 - 34,058,707 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	33,043,706 - 33,216,862 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	31,574,414 - 31,727,219 (-)	NCBI		Celera
Cytogenetic Map	4	q21	NCBI

Col28a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	14,462,226 - 14,633,236 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	14,462,226 - 14,634,396 (-)	NCBI	ChiLan1.0	ChiLan1.0

COL28A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	12,265,932 - 12,465,411 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	60,590,644 - 60,790,729 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	8,093,060 - 8,260,276 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	7,446,107 - 7,611,876 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	7,446,107 - 7,611,876 (-)	Ensembl	panpan1.1		panPan2

COL28A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	22,991,469 - 23,153,333 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	22,993,286 - 23,153,305 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	22,566,580 - 22,728,366 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	22,805,409 - 22,967,559 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	14	22,958,432 - 23,120,179 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	22,690,951 - 22,852,986 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	22,948,432 - 23,110,560 (-)	NCBI		UU_Cfam_GSD_1.0

Col28a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	36,314,965 - 36,475,876 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936585	2,390,414 - 2,546,366 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936585	2,390,383 - 2,547,859 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COL28A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	50,667,287 - 50,844,773 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	50,671,247 - 50,843,083 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	53,554,465 - 53,718,863 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Col28a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624813	4,947,301 - 5,152,632 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624813	4,945,733 - 5,180,098 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in COL28A1
3972 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	8	3	1	5	1	3	1	2	1
Below cutoff	2	1	2		1	12	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021063394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021063395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021063396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021063397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01132174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000016715 ⟹ ENSSSCP00000016269

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	77,670,897 - 77,833,806 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000047673 ⟹ ENSSSCP00000055541

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	77,666,282 - 77,832,584 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000070122 ⟹ ENSSSCP00000066187

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	77,666,282 - 77,832,584 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000071971 ⟹ ENSSSCP00000065806

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	77,666,282 - 77,832,584 (-)	Ensembl

RefSeq Acc Id:

XM_021063394 ⟹ XP_020919053

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	77,670,890 - 77,832,668 (-)	NCBI

Sequence:

show sequence

ATGCCTGACCACTCTTCCTTTAACTTAGTCTAAAAAACATGAGTAAAAGATTACAAAAGATACA
AAAGCAGACAATTTTTATTTCCTACAGAACAGAACAATATCATATAGCCAACTCCATCCCTAAC
AATGGTCTTTGCTGTTGGCATTTGCTTAACCAGTCTTTAGTTCCTGTTTGGCAAACTTTATAAG
GTGCTACACGGCAGATGATTTTTCACCATCTACCATAATGTGGATGAACAAACAATTTGTATTT
TATCTTCTGCTTTTGTCAGCTTTTATGAGCAAGACGATATATGGACAAAGAAAGAAAGGATCAA
AGTCCAATTTACTTGCAAGAAGAAATCATCTCCAGGATTCCACTTGCTTCATAGATCTTATTTT
CATCGTGGACAGCTCTGAAAGTTCTAAAATTTTTCTCTTTGACAAACAGAAAGATTTTGTGGAT
AGCTTGAGTGATAAGCTTTTCCAATTGACCCCAGTTGGCTCCTTGAAATATGACATCAAACTGG
CAGCCCTTCAGTTTAGCAGCTCTGTCCAAATTGATCCACCTTTCTCCTCGTGGAAGGATCTACA
CACTTTTAAACAGAGGGTGAAGTCTATGAATTTCATTGGGCAAGGTACTTTCTCTTACTATGCC
ATTGCCAATGCCACGAGGCTCCTTAAGAGAGAAGGGCGTAAAGACAGTGTGAAAGTGGCTTTGC
TGATGACTGATGGCATTGACCATCCGAAGAATCCAGATGTTCAGAGTATTTCTGAAGATGCCCG
AAATGCAGGAATAATATTTATCACCATTGGACTTTCTACTGTGGTCAATGAAACCAAGCTTCAT
TTGATATCTGGGAATTCACCTGGTGAACCTATTCTACTGTTGAATGATTCAACCCTGGTAGATA
AAATTCAGAATCGCCTGGATACCTTATTTGAAAAGAAGTGTGAACGCAAGATTTGTGAATGTGA
GAAGGGGGATCCAGGCGATCCAGGGCCTCCTGGTACACATGGAAACCCAGGTATCAAAGGTGAG
CGAGGACCAAAAGGAAACCCGGGTGATGCTCAAAAAGGGGAACCTGGAGAAAGAGGCCCAGGGG
GAATCCCTGGGTACAAGGGTGAGAAGGGTGAACTCGGAGAATGTGGCAAACCAGGAGTTAAAGG
TGACAAAGGATCTCCAGGGCCATATGGACCAAAGGGTCCCAGAGGACTTCAGGGCGTTACTGGA
CCTCCAGGGGATCCAGGCCCAAGGGGGTTTCAAGGCAACAAGGGGGAGCCTGGTCCTCCTGGTC
CTTATGGTCCTCCAGGAGCCCCTGGTATTGGTCAGCAAGGTATTAAGGGGGAAAGAGGCCAGGA
AGGAAGAACAGGGGCTCCAGGACCGATTGGTGTTGGTGAGCCAGGCCAGACAGGTCCCCGTGGT
CCTGAGGGAGCACCAGGAGAGAGGGGCTTACCAGGAGAAGGATTTCCAGGGCCAAAGGGTGAAA
AAGGTTCTGAAGGACCAGTTGGCCCACAAGGATTACAAGGCCCATCAATCAAAGGGGACAAGGG
GGATCTGGGACCTGTAGGACCCCAAGGACCAATGGGCATCCCTGGAATTGGCAGTCAAGGGGAA
CAGGGAATCCAAGGTCCTATTGGTCCACCTGGTCCACAAGGGCCCCCAGGACAAGGCTTACCTG
GTCCCAAGGGAGAAGTAGGCCAGATAGGACCTACAGGTCCTAGAGGACCAGTGGGAGTTGGAGT
ACAAGGTCCAAAGGGGGAGCCAGGCTCAACAGGACTCCCAGGACAGCCAGGAGTACCAGGAGAA
GATGGAGCAGCAGGCAAGAAGGGAGAAGCAGGGCTTCCAGGAGCAAGAGGCCCTGAAGGACCAC
CTGGAAAAGGACAACCTGGTCTCAAGGGGGATGAAGGAAAGAAAGGGAGCAAAGGAAATCAAGG
ACAGAGGGGATTTCCTGGGCCAGAAGGACCGAAGGGTGATCCAGGAATTATGGGCCCTTTTGGA
ATGCCTGGAGCATCAATTCCTGGACCACCTGGGCCAAAGGGAGATAGAGGAGGACCTGGGATGC
CTGGATTGAAAGGAGAACCTGGAATTGCTATCCGAGGACCAAAGGGTGCCCAAGGCCCTCAGGG
ACCAGTGGGTGCTCCAGGACTCAAAGGCGACGGCTATCCTGGTGTGGCTGGCCCACGAGGATTA
CCAGGACCTCCTGGACCAATGGGTTTACGTGGAGTTGGAGACACTGGAGCCAAGGGAGAGCCTG
GTGTCAGAGGCCTTCCAGGCCCTTCTGGGCCTCGGGGTATAGGAATTCAAGGGCCAAAGGGTGA
TACTGGGCAGAAAGGCTTGCCTGGCCCTCCTGGCCCCCCTGGCTATGGATTACAAGGAATCAAA
GGGGAGCAAGGACCTCGAGGCTTTCCAGGGTCAAAGGGCATGACAGGCCTTGGCCTCCCTGGCC
AGAAGGGAGAGCATGGAGAACGGGGCGATGTGGGAAAGAAAGGTGATAAAGGGGAAATTGGAGA
TCCCGGATCTCAAGGAAAACAGGGGTTGCAAGGACCAAAAGGAGACCAAGGGCTTACAAAAGAA
GAAATCATCAAACTTATTTTTGAAATATGTGGTTGTGGGCGTAAATGCAAAGAGACTCCGCTAG
AGCTACTCTTTGTGATTGACAGCTCAGAAAGCGTGGGGCTGGAGAATTTCCAGATCATCAAAAA
CTTCGTGAAGACTCTGACAGACGGGGTTGCTCTGGACCTTGCCACGGCCCGCATAGGCATCATC
AACTACAGCCATAAGGTGGAGGAGGTGGCTCATCTGACACAGTTCTCCAGCAAGGACGCCCTCA
AGCGGGCGGTGGACAACATGCAGTATCTGGGGGAAGGCACCTACACGGCCACAGCTCTCCACGC
CGCCAACCGCATGTTTGAAGCCTCCAGGCCGGAGGTGAAGAAGGTGGCCTTGGTCATCACAGAT
GGGCAGACAGATACCCGGGATGAAAAGAATCTGACAGATGTGGTGAAGAACGCCAGTGATATCA
ATGTGGAAATATTTGTGATTGGCGTGGTGAAGAAAAATGACCCCAACTTCGAGATGTTCCACAA
AGAAATGAATCTAATTGCTACCGACCCAGATAGTGAGCACGTTTATCAGTTTGATGACTTCATT
ACTCTTCAAGATACCCTGAAGCAAAAATTATTTAAAAAAAGTTGTGAGGATTTTGAATCCTACC
TCTTCCAAGTTTTGGGTTCACCACTGCTTGAACCTAGATTTGGGCTATCAGGGGAAGAACTCAG
TGAATCCACTCCAGAGCCCCGGAAAGAAATTTCTGAGTATGTCAGTGTTCCAGGAGCCCAGAAC
AGAGAGAATGAGCCTTCAGAGCCCACATGGACTGCCAGCCTGGCCACCACTCCCTTATCTGAGA
CCACCACCACCCCCACACCCCCTGAGGATCAGGCAGAGGTTCTGGAAACCAGAACTCCAAGGCC
CACTTTGAACTTTGAGCCAGAAAAATTGGTGCATAAAGATCCTAGGTGTTTGGAACCCCTAGAG
CCAGGAAACTGTGGTGAATATGTGGTTCGATGGTATTACGACAAGCAGGTCAACTCCTGTGCCC
GCTTTTGGTTCAGTGGCTGTAATGGCTCAGGAAATAGATTCAACAGTGAAAAGGAATGTCGAGA
AATCTGCATTCAAGAATGAGCAAGTAAATCACCCTGTACTGAGTCAAATCTGTGTCTTTATCAA
CAAGCCTAGGAAGAACCTCTGTAATTTCAATATTTACCCAATACAAATAAAACACCGTATTTTT
TGAGTGT

hide sequence

RefSeq Acc Id:

XM_021063395 ⟹ XP_020919054

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	77,670,890 - 77,833,861 (-)	NCBI

Sequence:

show sequence

GTTTCTTTTTTCTACTACCAAAGCCCTGAAAAACTTCCTCAGTTCCCCCAAAACTCCTATGTGG
TTAGGACCATTTCACATGGATACCTAATTTAATGATGTAATTGTTATAAGTGCTCTTTGGGGAA
CTAATGGACCTGAGCGAAGTTCCCATTCCGGCATTCTCTTGCATTCGTATGACAGTGGGTGCTA
CACGGCAGATGATTTTTCACCATCTACCATAATGTGGATGAACAAACAATTTGTATTTTATCTT
CTGCTTTTGTCAGCTTTTATGAGCAAGACGATATATGGACAAAGAAAGAAAGGATCAAAGTCCA
ATTTACTTGCAAGAAGAAATCATCTCCAGGATTCCACTTGCTTCATAGATCTTATTTTCATCGT
GGACAGCTCTGAAAGTTCTAAAATTTTTCTCTTTGACAAACAGAAAGATTTTGTGGATAGCTTG
AGTGATAAGCTTTTCCAATTGACCCCAGTTGGCTCCTTGAAATATGACATCAAACTGGCAGCCC
TTCAGTTTAGCAGCTCTGTCCAAATTGATCCACCTTTCTCCTCGTGGAAGGATCTACACACTTT
TAAACAGAGGGTGAAGTCTATGAATTTCATTGGGCAAGGTACTTTCTCTTACTATGCCATTGCC
AATGCCACGAGGCTCCTTAAGAGAGAAGGGCGTAAAGACAGTGTGAAAGTGGCTTTGCTGATGA
CTGATGGCATTGACCATCCGAAGAATCCAGATGTTCAGAGTATTTCTGAAGATGCCCGAAATGC
AGGAATAATATTTATCACCATTGGACTTTCTACTGTGGTCAATGAAACCAAGCTTCATTTGATA
TCTGGGAATTCACCTGGTGAACCTATTCTACTGTTGAATGATTCAACCCTGGTAGATAAAATTC
AGAATCGCCTGGATACCTTATTTGAAAAGAAGTGTGAACGCAAGATTTGTGAATGTGAGAAGGG
GGATCCAGGCGATCCAGGGCCTCCTGGTACACATGGAAACCCAGGTATCAAAGGTGAGCGAGGA
CCAAAAGGAAACCCGGGTGATGCTCAAAAAGGGGAACCTGGAGAAAGAGGCCCAGGGGGAATCC
CTGGGTACAAGGGTGAGAAGGGTGAACTCGGAGAATGTGGCAAACCAGGAGTTAAAGGTGACAA
AGGATCTCCAGGGCCATATGGACCAAAGGGTCCCAGAGGACTTCAGGGCGTTACTGGACCTCCA
GGGGATCCAGGCCCAAGGGGGTTTCAAGGCAACAAGGGGGAGCCTGGTCCTCCTGGTCCTTATG
GTCCTCCAGGAGCCCCTGGTATTGGTCAGCAAGGTATTAAGGGGGAAAGAGGCCAGGAAGGAAG
AACAGGGGCTCCAGGACCGATTGGTGTTGGTGAGCCAGGCCAGACAGGTCCCCGTGGTCCTGAG
GGAGCACCAGGAGAGAGGGGCTTACCAGGAGAAGGATTTCCAGGGCCAAAGGGTGAAAAAGGTT
CTGAAGGACCAGTTGGCCCACAAGGATTACAAGGCCCATCAATCAAAGGGGACAAGGGGGATCT
GGGACCTGTAGGACCCCAAGGACCAATGGGCATCCCTGGAATTGGCAGTCAAGGGGAACAGGGA
ATCCAAGGTCCTATTGGTCCACCTGGTCCACAAGGGCCCCCAGGACAAGGCTTACCTGGTCCCA
AGGGAGAAGTAGGCCAGATAGGACCTACAGGTCCTAGAGGACCAGTGGGAGTTGGAGTACAAGG
TCCAAAGGGGGAGCCAGGCTCAACAGGACTCCCAGGACAGCCAGGAGTACCAGGAGAAGATGGA
GCAGCAGGCAAGAAGGGAGAAGCAGGGCTTCCAGGAGCAAGAGGCCCTGAAGGACCACCTGGAA
AAGGACAACCTGGTCTCAAGGGGGATGAAGGAAAGAAAGGGAGCAAAGGAAATCAAGGACAGAG
GGGATTTCCTGGGCCAGAAGGACCGAAGGGTGATCCAGGAATTATGGGCCCTTTTGGAATGCCT
GGAGCATCAATTCCTGGACCACCTGGGCCAAAGGGAGATAGAGGAGGACCTGGGATGCCTGGAT
TGAAAGGAGAACCTGGAATTGCTATCCGAGGACCAAAGGGTGCCCAAGGCCCTCAGGGACCAGT
GGGTGCTCCAGGACTCAAAGGCGACGGCTATCCTGGTGTGGCTGGCCCACGAGGATTACCAGGA
CCTCCTGGACCAATGGGTTTACGTGGAGTTGGAGACACTGGAGCCAAGGGAGAGCCTGGTGTCA
GAGGCCTTCCAGGCCCTTCTGGGCCTCGGGGTATAGGAATTCAAGGGCCAAAGGGTGATACTGG
GCAGAAAGGCTTGCCTGGCCCTCCTGGCCCCCCTGGCTATGGATTACAAGGAATCAAAGGGGAG
CAAGGACCTCGAGGCTTTCCAGGGTCAAAGGGCATGACAGGCCTTGGCCTCCCTGGCCAGAAGG
GAGAGCATGGAGAACGGGGCGATGTGGGAAAGAAAGGTGATAAAGGGGAAATTGGAGATCCCGG
ATCTCAAGGAAAACAGGGGTTGCAAGGACCAAAAGGAGACCAAGGGCTTACAAAAGAAGAAATC
ATCAAACTTATTTTTGAAATATGTGGTTGTGGGCGTAAATGCAAAGAGACTCCGCTAGAGCTAC
TCTTTGTGATTGACAGCTCAGAAAGCGTGGGGCTGGAGAATTTCCAGATCATCAAAAACTTCGT
GAAGACTCTGACAGACGGGGTTGCTCTGGACCTTGCCACGGCCCGCATAGGCATCATCAACTAC
AGCCATAAGGTGGAGGAGGTGGCTCATCTGACACAGTTCTCCAGCAAGGACGCCCTCAAGCGGG
CGGTGGACAACATGCAGTATCTGGGGGAAGGCACCTACACGGCCACAGCTCTCCACGCCGCCAA
CCGCATGTTTGAAGCCTCCAGGCCGGAGGTGAAGAAGGTGGCCTTGGTCATCACAGATGGGCAG
ACAGATACCCGGGATGAAAAGAATCTGACAGATGTGGTGAAGAACGCCAGTGATATCAATGTGG
AAATATTTGTGATTGGCGTGGTGAAGAAAAATGACCCCAACTTCGAGATGTTCCACAAAGAAAT
GAATCTAATTGCTACCGACCCAGATAGTGAGCACGTTTATCAGTTTGATGACTTCATTACTCTT
CAAGATACCCTGAAGCAAAAATTATTTAAAAAAAGTTGTGAGGATTTTGAATCCTACCTCTTCC
AAGTTTTGGGTTCACCACTGCTTGAACCTAGATTTGGGCTATCAGGGGAAGAACTCAGTGAATC
CACTCCAGAGCCCCGGAAAGAAATTTCTGAGTATGTCAGTGTTCCAGGAGCCCAGAACAGAGAG
AATGAGCCTTCAGAGCCCACATGGACTGCCAGCCTGGCCACCACTCCCTTATCTGAGACCACCA
CCACCCCCACACCCCCTGAGGATCAGGCAGAGGTTCTGGAAACCAGAACTCCAAGGCCCACTTT
GAACTTTGAGCCAGAAAAATTGGTGCATAAAGATCCTAGGTGTTTGGAACCCCTAGAGCCAGGA
AACTGTGGTGAATATGTGGTTCGATGGTATTACGACAAGCAGGTCAACTCCTGTGCCCGCTTTT
GGTTCAGTGGCTGTAATGGCTCAGGAAATAGATTCAACAGTGAAAAGGAATGTCGAGAAATCTG
CATTCAAGAATGAGCAAGTAAATCACCCTGTACTGAGTCAAATCTGTGTCTTTATCAACAAGCC
TAGGAAGAACCTCTGTAATTTCAATATTTACCCAATACAAATAAAACACCGTATTTTTTGAGTG
T

hide sequence

RefSeq Acc Id:

XM_021063396 ⟹ XP_020919055

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	77,670,890 - 77,841,939 (-)	NCBI

Sequence:

show sequence

AGGCTTGGAACTGAAGAGTCTGAAAGAGATTTCTTTGGCAAAATTCATTGCCATGGTACCTCAC
TTCTAAGCTGGTGGGAGAGGTTTGAAGGTGCTCTTCTTCACAGAGAGCTTGATCTAGGCATGGG
AATGAAGGTGGGAGATGTGGAGGGCTGCTGTCTGAGCCAATTCCTGGAATCGTTCTGAAGGCGA
GAGGTGCTACACGGCAGATGATTTTTCACCATCTACCATAATGTGGATGAACAAACAATTTGTA
TTTTATCTTCTGCTTTTGTCAGCTTTTATGAGCAAGACGATATATGGACAAAGAAAGAAAGGAT
CAAAGTCCAATTTACTTGCAAGAAGAAATCATCTCCAGGATTCCACTTGCTTCATAGATCTTAT
TTTCATCGTGGACAGCTCTGAAAGTTCTAAAATTTTTCTCTTTGACAAACAGAAAGATTTTGTG
GATAGCTTGAGTGATAAGCTTTTCCAATTGACCCCAGTTGGCTCCTTGAAATATGACATCAAAC
TGGCAGCCCTTCAGTTTAGCAGCTCTGTCCAAATTGATCCACCTTTCTCCTCGTGGAAGGATCT
ACACACTTTTAAACAGAGGGTGAAGTCTATGAATTTCATTGGGCAAGGTACTTTCTCTTACTAT
GCCATTGCCAATGCCACGAGGCTCCTTAAGAGAGAAGGGCGTAAAGACAGTGTGAAAGTGGCTT
TGCTGATGACTGATGGCATTGACCATCCGAAGAATCCAGATGTTCAGAGTATTTCTGAAGATGC
CCGAAATGCAGGAATAATATTTATCACCATTGGACTTTCTACTGTGGTCAATGAAACCAAGCTT
CATTTGATATCTGGGAATTCACCTGGTGAACCTATTCTACTGTTGAATGATTCAACCCTGGTAG
ATAAAATTCAGAATCGCCTGGATACCTTATTTGAAAAGAAGTGTGAACGCAAGATTTGTGAATG
TGAGAAGGGGGATCCAGGCGATCCAGGGCCTCCTGGTACACATGGAAACCCAGGTATCAAAGGT
GAGCGAGGACCAAAAGGAAACCCGGGTGATGCTCAAAAAGGGGAACCTGGAGAAAGAGGCCCAG
GGGGAATCCCTGGGTACAAGGGTGAGAAGGGTGAACTCGGAGAATGTGGCAAACCAGGAGTTAA
AGGTGACAAAGGATCTCCAGGGCCATATGGACCAAAGGGTCCCAGAGGACTTCAGGGCGTTACT
GGACCTCCAGGGGATCCAGGCCCAAGGGGGTTTCAAGGCAACAAGGGGGAGCCTGGTCCTCCTG
GTCCTTATGGTCCTCCAGGAGCCCCTGGTATTGGTCAGCAAGGTATTAAGGGGGAAAGAGGCCA
GGAAGGAAGAACAGGGGCTCCAGGACCGATTGGTGTTGGTGAGCCAGGCCAGACAGGTCCCCGT
GGTCCTGAGGGAGCACCAGGAGAGAGGGGCTTACCAGGAGAAGGATTTCCAGGGCCAAAGGGTG
AAAAAGGTTCTGAAGGACCAGTTGGCCCACAAGGATTACAAGGCCCATCAATCAAAGGGGACAA
GGGGGATCTGGGACCTGTAGGACCCCAAGGACCAATGGGCATCCCTGGAATTGGCAGTCAAGGG
GAACAGGGAATCCAAGGTCCTATTGGTCCACCTGGTCCACAAGGGCCCCCAGGACAAGGCTTAC
CTGGTCCCAAGGGAGAAGTAGGCCAGATAGGACCTACAGGTCCTAGAGGACCAGTGGGAGTTGG
AGTACAAGGTCCAAAGGGGGAGCCAGGCTCAACAGGACTCCCAGGACAGCCAGGAGTACCAGGA
GAAGATGGAGCAGCAGGCAAGAAGGGAGAAGCAGGGCTTCCAGGAGCAAGAGGCCCTGAAGGAC
CACCTGGAAAAGGACAACCTGGTCTCAAGGGGGATGAAGGAAAGAAAGGGAGCAAAGGAAATCA
AGGACAGAGGGGATTTCCTGGGCCAGAAGGACCGAAGGGTGATCCAGGAATTATGGGCCCTTTT
GGAATGCCTGGAGCATCAATTCCTGGACCACCTGGGCCAAAGGGAGATAGAGGAGGACCTGGGA
TGCCTGGATTGAAAGGAGAACCTGGAATTGCTATCCGAGGACCAAAGGGTGCCCAAGGCCCTCA
GGGACCAGTGGGTGCTCCAGGACTCAAAGGCGACGGCTATCCTGGTGTGGCTGGCCCACGAGGA
TTACCAGGACCTCCTGGACCAATGGGTTTACGTGGAGTTGGAGACACTGGAGCCAAGGGAGAGC
CTGGTGTCAGAGGCCTTCCAGGCCCTTCTGGGCCTCGGGGTATAGGAATTCAAGGGCCAAAGGG
TGATACTGGGCAGAAAGGCTTGCCTGGCCCTCCTGGCCCCCCTGGCTATGGATTACAAGGAATC
AAAGGGGAGCAAGGACCTCGAGGCTTTCCAGGGTCAAAGGGCATGACAGGCCTTGGCCTCCCTG
GCCAGAAGGGAGAGCATGGAGAACGGGGCGATGTGGGAAAGAAAGGTGATAAAGGGGAAATTGG
AGATCCCGGATCTCAAGGAAAACAGGGGTTGCAAGGACCAAAAGGAGACCAAGGGCTTACAAAA
GAAGAAATCATCAAACTTATTTTTGAAATATGTGGTTGTGGGCGTAAATGCAAAGAGACTCCGC
TAGAGCTACTCTTTGTGATTGACAGCTCAGAAAGCGTGGGGCTGGAGAATTTCCAGATCATCAA
AAACTTCGTGAAGACTCTGACAGACGGGGTTGCTCTGGACCTTGCCACGGCCCGCATAGGCATC
ATCAACTACAGCCATAAGGTGGAGGAGGTGGCTCATCTGACACAGTTCTCCAGCAAGGACGCCC
TCAAGCGGGCGGTGGACAACATGCAGTATCTGGGGGAAGGCACCTACACGGCCACAGCTCTCCA
CGCCGCCAACCGCATGTTTGAAGCCTCCAGGCCGGAGGTGAAGAAGGTGGCCTTGGTCATCACA
GATGGGCAGACAGATACCCGGGATGAAAAGAATCTGACAGATGTGGTGAAGAACGCCAGTGATA
TCAATGTGGAAATATTTGTGATTGGCGTGGTGAAGAAAAATGACCCCAACTTCGAGATGTTCCA
CAAAGAAATGAATCTAATTGCTACCGACCCAGATAGTGAGCACGTTTATCAGTTTGATGACTTC
ATTACTCTTCAAGATACCCTGAAGCAAAAATTATTTAAAAAAAGTTGTGAGGATTTTGAATCCT
ACCTCTTCCAAGTTTTGGGTTCACCACTGCTTGAACCTAGATTTGGGCTATCAGGGGAAGAACT
CAGTGAATCCACTCCAGAGCCCCGGAAAGAAATTTCTGAGTATGTCAGTGTTCCAGGAGCCCAG
AACAGAGAGAATGAGCCTTCAGAGCCCACATGGACTGCCAGCCTGGCCACCACTCCCTTATCTG
AGACCACCACCACCCCCACACCCCCTGAGGATCAGGCAGAGGTTCTGGAAACCAGAACTCCAAG
GCCCACTTTGAACTTTGAGCCAGAAAAATTGGTGCATAAAGATCCTAGGTGTTTGGAACCCCTA
GAGCCAGGAAACTGTGGTGAATATGTGGTTCGATGGTATTACGACAAGCAGGTCAACTCCTGTG
CCCGCTTTTGGTTCAGTGGCTGTAATGGCTCAGGAAATAGATTCAACAGTGAAAAGGAATGTCG
AGAAATCTGCATTCAAGAATGAGCAAGTAAATCACCCTGTACTGAGTCAAATCTGTGTCTTTAT
CAACAAGCCTAGGAAGAACCTCTGTAATTTCAATATTTACCCAATACAAATAAAACACCGTATT
TTTTGAGTGT

hide sequence

RefSeq Acc Id:

XM_021063397 ⟹ XP_020919056

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	77,670,890 - 77,832,668 (-)	NCBI

Sequence:

show sequence

ATGCCTGACCACTCTTCCTTTAACTTAGTCTAAAAAACATGAGTAAAAGATTACAAAAGATACA
AAAGCAGACAATTTTTATTTCCTACAGAACAGAACAATATCATATAGCCAACTCCATCCCTAAC
AATGGTCTTTGCTGTTGGCATTTGCTTAACCAGTCTTTAGTTCCTGTTTGGCAAACTTTATAAG
GTGCTACACGGCAGATGATTTTTCACCATCTACCATAATGTGGATGAACAAACAATTTGTATTT
TATCTTCTGCTTTTGTCAGCTTTTATGAGCAAGACGATATATGGACAAAGAAAGAAAGGATCAA
AGTCCAATTTACTTGCAAGAAGAAATCATCTCCAGGATTCCACTTGCTTCATAGATCTTATTTT
CATCGTGGACAGCTCTGAAAGTTCTAAAATTTTTCTCTTTGACAAACAGAAAGATTTTGTGGAT
AGCTTGAGTGATAAGCTTTTCCAATTGACCCCAGTTGGCTCCTTGAAATATGACATCAAACTGG
CAGCCCTTCAGTTTAGCAGCTCTGTCCAAATTGATCCACCTTTCTCCTCGTGGAAGGATCTACA
CACTTTTAAACAGAGGGTGAAGTCTATGAATTTCATTGGGCAAGGTACTTTCTCTTACTATGCC
ATTGCCAATGCCACGAGGCTCCTTAAGAGAGAAGGGCGTAAAGACAGTGTGAAAGTGGCTTTGC
TGATGACTGATGGCATTGACCATCCGAAGAATCCAGATGTTCAGAGTATTTCTGAAGATGCCCG
AAATGCAGGAATAATATTTATCACCATTGGACTTTCTACTGTGGTCAATGAAACCAAGCTTCAT
TTGATATCTGGGAATTCACCTGGTGAACCTATTCTACTGTTGAATGATTCAACCCTGGTAGATA
AAATTCAGAATCGCCTGGATACCTTATTTGAAAAGAAGTGTGAACGCAAGATTTGTGAATGTGA
GAAGGGGGATCCAGGCGATCCAGGGCCTCCTGGTACACATGGAAACCCAGGTATCAAAGGTGAG
CGAGGACCAAAAGGAAACCCGGGTGATGCTCAAAAAGGGGAACCTGGAGAAAGAGGCCCAGGGG
GAATCCCTGGGTACAAGGGTGAGAAGGGTGAACTCGGAGAATGTGGCAAACCAGGAGTTAAAGG
TGACAAAGGATCTCCAGGGCCATATGGACCAAAGGGTCCCAGAGGACTTCAGGGCGTTACTGGA
CCTCCAGGGGATCCAGGCCCAAGGGGGTTTCAAGGCAACAAGGGGGAGCCTGGTCCTCCTGGTC
CTTATGGTCCTCCAGGAGCCCCTGGTATTGGTCAGCAAGGTATTAAGGGGGAAAGAGGCCAGGA
AGGAAGAACAGGGGCTCCAGGACCGATTGGTGTTGGTGAGCCAGGCCAGACAGGTCCCCGTGGT
CCTGAGGGAGCACCAGGAGAGAGGGGCTTACCAGGAGAAGGATTTCCAGGGCCAAAGGGTGAAA
AAGGTTCTGAAGGACCAGTTGGCCCACAAGGATTACAAGGCCCATCAATCAAAGGGGACAAGGG
GGATCTGGGACCTGTAGGACCCCAAGGACCAATGGGCATCCCTGGAATTGGCAGTCAAGGGGAA
CAGGGAATCCAAGGTCCTATTGGTCCACCTGGTCCACAAGGGCCCCCAGGACAAGGCTTACCTG
GTCCCAAGGGAGAAGTAGGCCAGATAGGACCTACAGGTCCTAGAGGACCAGTGGGAGTTGGAGT
ACAAGGTCCAAAGGGGGAGCCAGGCTCAACAGGACTCCCAGGACAGCCAGGAGTACCAGGAGAA
GATGGAGCAGCAGGCAAGAAGGGAGAAGCAGGGCTTCCAGGAGCAAGAGGCCCTGAAGGACCAC
CTGGAAAAGGACAACCTGGTCTCAAGGGGGATGAAGGAAAGAAAGGGAGCAAAGGAAATCAAGG
ACAGAGGGGATTTCCTGGGCCAGAAGGACCGAAGGGTGATCCAGGAATTATGGGCCCTTTTGGA
ATGCCTGGAGCATCAATTCCTGGACCACCTGGGCCAAAGGGAGATAGAGGAGGACCTGGGATGC
CTGGATTGAAAGGAGAACCTGGAATTGCTATCCGAGGACCAAAGGGTGCCCAAGGCCCTCAGGG
ACCAGTGGGTGCTCCAGGACTCAAAGGCGACGGCTATCCTGGTGTGGCTGGCCCACGAGGATTA
CCAGGACCTCCTGGACCAATGGGTTTACGTGGAGTTGGAGACACTGGAGCCAAGGGAGAGCCTG
GTGTCAGAGGCCTTCCAGGCCCTTCTGGGCCTCGGGGTATAGGAATTCAAGGGCCAAAGGGTGA
TACTGGGCAGAAAGGCTTGCCTGGCCCTCCTGGCCCCCCTGGCTATGGATTACAAGGAATCAAA
GGGGAGCAAGGACCTCGAGGCTTTCCAGGGTCAAAGGGCATGACAGGCCTTGGCCTCCCTGGCC
AGAAGGGGTTGCAAGGACCAAAAGGAGACCAAGGGCTTACAAAAGAAGAAATCATCAAACTTAT
TTTTGAAATATGTGGTTGTGGGCGTAAATGCAAAGAGACTCCGCTAGAGCTACTCTTTGTGATT
GACAGCTCAGAAAGCGTGGGGCTGGAGAATTTCCAGATCATCAAAAACTTCGTGAAGACTCTGA
CAGACGGGGTTGCTCTGGACCTTGCCACGGCCCGCATAGGCATCATCAACTACAGCCATAAGGT
GGAGGAGGTGGCTCATCTGACACAGTTCTCCAGCAAGGACGCCCTCAAGCGGGCGGTGGACAAC
ATGCAGTATCTGGGGGAAGGCACCTACACGGCCACAGCTCTCCACGCCGCCAACCGCATGTTTG
AAGCCTCCAGGCCGGAGGTGAAGAAGGTGGCCTTGGTCATCACAGATGGGCAGACAGATACCCG
GGATGAAAAGAATCTGACAGATGTGGTGAAGAACGCCAGTGATATCAATGTGGAAATATTTGTG
ATTGGCGTGGTGAAGAAAAATGACCCCAACTTCGAGATGTTCCACAAAGAAATGAATCTAATTG
CTACCGACCCAGATAGTGAGCACGTTTATCAGTTTGATGACTTCATTACTCTTCAAGATACCCT
GAAGCAAAAATTATTTAAAAAAAGTTGTGAGGATTTTGAATCCTACCTCTTCCAAGTTTTGGGT
TCACCACTGCTTGAACCTAGATTTGGGCTATCAGGGGAAGAACTCAGTGAATCCACTCCAGAGC
CCCGGAAAGAAATTTCTGAGTATGTCAGTGTTCCAGGAGCCCAGAACAGAGAGAATGAGCCTTC
AGAGCCCACATGGACTGCCAGCCTGGCCACCACTCCCTTATCTGAGACCACCACCACCCCCACA
CCCCCTGAGGATCAGGCAGAGGTTCTGGAAACCAGAACTCCAAGGCCCACTTTGAACTTTGAGC
CAGAAAAATTGGTGCATAAAGATCCTAGGTGTTTGGAACCCCTAGAGCCAGGAAACTGTGGTGA
ATATGTGGTTCGATGGTATTACGACAAGCAGGTCAACTCCTGTGCCCGCTTTTGGTTCAGTGGC
TGTAATGGCTCAGGAAATAGATTCAACAGTGAAAAGGAATGTCGAGAAATCTGCATTCAAGAAT
GAGCAAGTAAATCACCCTGTACTGAGTCAAATCTGTGTCTTTATCAACAAGCCTAGGAAGAACC
TCTGTAATTTCAATATTTACCCAATACAAATAAAACACCGTATTTTTTGAGTGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_020919053	(Get FASTA)	NCBI Sequence Viewer
	XP_020919054	(Get FASTA)	NCBI Sequence Viewer
	XP_020919055	(Get FASTA)	NCBI Sequence Viewer
	XP_020919056	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000016269
	ENSSSCP00000016269.4
	ENSSSCP00000055541.1
	ENSSSCP00000065806.1
	ENSSSCP00000066187
	ENSSSCP00000066187.1
	ENSSSCP00025017459.1
	ENSSSCP00045005529.1
	ENSSSCP00055031676.1
	ENSSSCP00070018002.1
	ENSSSCP00070018037.1

RefSeq Acc Id:	XP_020919055 ⟸ XM_021063396
- Peptide Label:	isoform X1
- UniProtKB:	A0A5G2QMS9 (UniProtKB/TrEMBL), A0A8D1R7P0 (UniProtKB/TrEMBL), A0A8D0RJQ9 (UniProtKB/TrEMBL), A0A8D1GQJ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWMNKQFVFYLLLLSAFMSKTIYGQRKKGSKSNLLARRNHLQDSTCFIDLIFIVDSSESSKIFL FDKQKDFVDSLSDKLFQLTPVGSLKYDIKLAALQFSSSVQIDPPFSSWKDLHTFKQRVKSMNFI GQGTFSYYAIANATRLLKREGRKDSVKVALLMTDGIDHPKNPDVQSISEDARNAGIIFITIGLS TVVNETKLHLISGNSPGEPILLLNDSTLVDKIQNRLDTLFEKKCERKICECEKGDPGDPGPPGT HGNPGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGKPGVKGDKGSPGPYGPKG PRGLQGVTGPPGDPGPRGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVG EPGQTGPRGPEGAPGERGLPGEGFPGPKGEKGSEGPVGPQGLQGPSIKGDKGDLGPVGPQGPMG IPGIGSQGEQGIQGPIGPPGPQGPPGQGLPGPKGEVGQIGPTGPRGPVGVGVQGPKGEPGSTGL PGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGLKGDEGKKGSKGNQGQRGFPGPEGPKG DPGIMGPFGMPGASIPGPPGPKGDRGGPGMPGLKGEPGIAIRGPKGAQGPQGPVGAPGLKGDGY PGVAGPRGLPGPPGPMGLRGVGDTGAKGEPGVRGLPGPSGPRGIGIQGPKGDTGQKGLPGPPGP PGYGLQGIKGEQGPRGFPGSKGMTGLGLPGQKGEHGERGDVGKKGDKGEIGDPGSQGKQGLQGP KGDQGLTKEEIIKLIFEICGCGRKCKETPLELLFVIDSSESVGLENFQIIKNFVKTLTDGVALD LATARIGIINYSHKVEEVAHLTQFSSKDALKRAVDNMQYLGEGTYTATALHAANRMFEASRPEV KKVALVITDGQTDTRDEKNLTDVVKNASDINVEIFVIGVVKKNDPNFEMFHKEMNLIATDPDSE HVYQFDDFITLQDTLKQKLFKKSCEDFESYLFQVLGSPLLEPRFGLSGEELSESTPEPRKEISE YVSVPGAQNRENEPSEPTWTASLATTPLSETTTTPTPPEDQAEVLETRTPRPTLNFEPEKLVHK DPRCLEPLEPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECREICIQE hide sequence

RefSeq Acc Id:	XP_020919054 ⟸ XM_021063395
- Peptide Label:	isoform X1
- UniProtKB:	A0A5G2QMS9 (UniProtKB/TrEMBL), A0A8D1R7P0 (UniProtKB/TrEMBL), A0A8D0RJQ9 (UniProtKB/TrEMBL), A0A8D1GQJ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWMNKQFVFYLLLLSAFMSKTIYGQRKKGSKSNLLARRNHLQDSTCFIDLIFIVDSSESSKIFL FDKQKDFVDSLSDKLFQLTPVGSLKYDIKLAALQFSSSVQIDPPFSSWKDLHTFKQRVKSMNFI GQGTFSYYAIANATRLLKREGRKDSVKVALLMTDGIDHPKNPDVQSISEDARNAGIIFITIGLS TVVNETKLHLISGNSPGEPILLLNDSTLVDKIQNRLDTLFEKKCERKICECEKGDPGDPGPPGT HGNPGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGKPGVKGDKGSPGPYGPKG PRGLQGVTGPPGDPGPRGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVG EPGQTGPRGPEGAPGERGLPGEGFPGPKGEKGSEGPVGPQGLQGPSIKGDKGDLGPVGPQGPMG IPGIGSQGEQGIQGPIGPPGPQGPPGQGLPGPKGEVGQIGPTGPRGPVGVGVQGPKGEPGSTGL PGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGLKGDEGKKGSKGNQGQRGFPGPEGPKG DPGIMGPFGMPGASIPGPPGPKGDRGGPGMPGLKGEPGIAIRGPKGAQGPQGPVGAPGLKGDGY PGVAGPRGLPGPPGPMGLRGVGDTGAKGEPGVRGLPGPSGPRGIGIQGPKGDTGQKGLPGPPGP PGYGLQGIKGEQGPRGFPGSKGMTGLGLPGQKGEHGERGDVGKKGDKGEIGDPGSQGKQGLQGP KGDQGLTKEEIIKLIFEICGCGRKCKETPLELLFVIDSSESVGLENFQIIKNFVKTLTDGVALD LATARIGIINYSHKVEEVAHLTQFSSKDALKRAVDNMQYLGEGTYTATALHAANRMFEASRPEV KKVALVITDGQTDTRDEKNLTDVVKNASDINVEIFVIGVVKKNDPNFEMFHKEMNLIATDPDSE HVYQFDDFITLQDTLKQKLFKKSCEDFESYLFQVLGSPLLEPRFGLSGEELSESTPEPRKEISE YVSVPGAQNRENEPSEPTWTASLATTPLSETTTTPTPPEDQAEVLETRTPRPTLNFEPEKLVHK DPRCLEPLEPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECREICIQE hide sequence

RefSeq Acc Id:	XP_020919056 ⟸ XM_021063397
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0RJQ9 (UniProtKB/TrEMBL), A0A8D1GQJ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWMNKQFVFYLLLLSAFMSKTIYGQRKKGSKSNLLARRNHLQDSTCFIDLIFIVDSSESSKIFL FDKQKDFVDSLSDKLFQLTPVGSLKYDIKLAALQFSSSVQIDPPFSSWKDLHTFKQRVKSMNFI GQGTFSYYAIANATRLLKREGRKDSVKVALLMTDGIDHPKNPDVQSISEDARNAGIIFITIGLS TVVNETKLHLISGNSPGEPILLLNDSTLVDKIQNRLDTLFEKKCERKICECEKGDPGDPGPPGT HGNPGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGKPGVKGDKGSPGPYGPKG PRGLQGVTGPPGDPGPRGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVG EPGQTGPRGPEGAPGERGLPGEGFPGPKGEKGSEGPVGPQGLQGPSIKGDKGDLGPVGPQGPMG IPGIGSQGEQGIQGPIGPPGPQGPPGQGLPGPKGEVGQIGPTGPRGPVGVGVQGPKGEPGSTGL PGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGLKGDEGKKGSKGNQGQRGFPGPEGPKG DPGIMGPFGMPGASIPGPPGPKGDRGGPGMPGLKGEPGIAIRGPKGAQGPQGPVGAPGLKGDGY PGVAGPRGLPGPPGPMGLRGVGDTGAKGEPGVRGLPGPSGPRGIGIQGPKGDTGQKGLPGPPGP PGYGLQGIKGEQGPRGFPGSKGMTGLGLPGQKGLQGPKGDQGLTKEEIIKLIFEICGCGRKCKE TPLELLFVIDSSESVGLENFQIIKNFVKTLTDGVALDLATARIGIINYSHKVEEVAHLTQFSSK DALKRAVDNMQYLGEGTYTATALHAANRMFEASRPEVKKVALVITDGQTDTRDEKNLTDVVKNA SDINVEIFVIGVVKKNDPNFEMFHKEMNLIATDPDSEHVYQFDDFITLQDTLKQKLFKKSCEDF ESYLFQVLGSPLLEPRFGLSGEELSESTPEPRKEISEYVSVPGAQNRENEPSEPTWTASLATTP LSETTTTPTPPEDQAEVLETRTPRPTLNFEPEKLVHKDPRCLEPLEPGNCGEYVVRWYYDKQVN SCARFWFSGCNGSGNRFNSEKECREICIQE hide sequence

RefSeq Acc Id:	XP_020919053 ⟸ XM_021063394
- Peptide Label:	isoform X1
- UniProtKB:	A0A5G2QMS9 (UniProtKB/TrEMBL), A0A8D1R7P0 (UniProtKB/TrEMBL), A0A8D0RJQ9 (UniProtKB/TrEMBL), A0A8D1GQJ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWMNKQFVFYLLLLSAFMSKTIYGQRKKGSKSNLLARRNHLQDSTCFIDLIFIVDSSESSKIFL FDKQKDFVDSLSDKLFQLTPVGSLKYDIKLAALQFSSSVQIDPPFSSWKDLHTFKQRVKSMNFI GQGTFSYYAIANATRLLKREGRKDSVKVALLMTDGIDHPKNPDVQSISEDARNAGIIFITIGLS TVVNETKLHLISGNSPGEPILLLNDSTLVDKIQNRLDTLFEKKCERKICECEKGDPGDPGPPGT HGNPGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGKPGVKGDKGSPGPYGPKG PRGLQGVTGPPGDPGPRGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVG EPGQTGPRGPEGAPGERGLPGEGFPGPKGEKGSEGPVGPQGLQGPSIKGDKGDLGPVGPQGPMG IPGIGSQGEQGIQGPIGPPGPQGPPGQGLPGPKGEVGQIGPTGPRGPVGVGVQGPKGEPGSTGL PGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGLKGDEGKKGSKGNQGQRGFPGPEGPKG DPGIMGPFGMPGASIPGPPGPKGDRGGPGMPGLKGEPGIAIRGPKGAQGPQGPVGAPGLKGDGY PGVAGPRGLPGPPGPMGLRGVGDTGAKGEPGVRGLPGPSGPRGIGIQGPKGDTGQKGLPGPPGP PGYGLQGIKGEQGPRGFPGSKGMTGLGLPGQKGEHGERGDVGKKGDKGEIGDPGSQGKQGLQGP KGDQGLTKEEIIKLIFEICGCGRKCKETPLELLFVIDSSESVGLENFQIIKNFVKTLTDGVALD LATARIGIINYSHKVEEVAHLTQFSSKDALKRAVDNMQYLGEGTYTATALHAANRMFEASRPEV KKVALVITDGQTDTRDEKNLTDVVKNASDINVEIFVIGVVKKNDPNFEMFHKEMNLIATDPDSE HVYQFDDFITLQDTLKQKLFKKSCEDFESYLFQVLGSPLLEPRFGLSGEELSESTPEPRKEISE YVSVPGAQNRENEPSEPTWTASLATTPLSETTTTPTPPEDQAEVLETRTPRPTLNFEPEKLVHK DPRCLEPLEPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECREICIQE hide sequence

RefSeq Acc Id:

ENSSSCP00000016269 ⟸ ENSSSCT00000016715

RefSeq Acc Id:

ENSSSCP00000066187 ⟸ ENSSSCT00000070122

RefSeq Acc Id:

ENSSSCP00000065806 ⟸ ENSSSCT00000071971

RefSeq Acc Id:

ENSSSCP00000055541 ⟸ ENSSSCT00000047673

Protein Domains

BPTI/Kunitz inhibitor VWFA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000015342	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025029393	UniProtKB/TrEMBL
	ENSSSCG00045004904	UniProtKB/TrEMBL
	ENSSSCG00055019927	UniProtKB/TrEMBL
	ENSSSCG00070011159	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000016715	ENTREZGENE
	ENSSSCT00000016715.4	UniProtKB/TrEMBL
	ENSSSCT00000047673.3	UniProtKB/TrEMBL
	ENSSSCT00000070122	ENTREZGENE
	ENSSSCT00000070122.2	UniProtKB/TrEMBL
	ENSSSCT00000071971.2	UniProtKB/TrEMBL
	ENSSSCT00025041030.1	UniProtKB/TrEMBL
	ENSSSCT00045008159.1	UniProtKB/TrEMBL
	ENSSSCT00055039832.1	UniProtKB/TrEMBL
	ENSSSCT00070021752.1	UniProtKB/TrEMBL
	ENSSSCT00070021788.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.410	UniProtKB/TrEMBL
	4.10.410.10	UniProtKB/TrEMBL
InterPro	Collagen	UniProtKB/TrEMBL
	Kunitz_BPTI	UniProtKB/TrEMBL
	Kunitz_BPTI_sf	UniProtKB/TrEMBL
	Prtase_inh_Kunz-CS	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
NCBI Gene	COL28A1	ENTREZGENE
PANTHER	COLLAGEN ALPHA	UniProtKB/TrEMBL
	COLLAGEN ALPHA-1(X) CHAIN	UniProtKB/TrEMBL
	COLLAGEN ALPHA-1(XXVIII) CHAIN	UniProtKB/TrEMBL
Pfam	Collagen	UniProtKB/TrEMBL
	Kunitz_BPTI	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
PRINTS	VWFADOMAIN	UniProtKB/TrEMBL
PROSITE	BPTI_KUNITZ_1	UniProtKB/TrEMBL
	BPTI_KUNITZ_2	UniProtKB/TrEMBL
	VWFA	UniProtKB/TrEMBL
SMART	SM00131	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53300	UniProtKB/TrEMBL
	SSF57362	UniProtKB/TrEMBL
UniProt	A0A287BG85_PIG	UniProtKB/TrEMBL
	A0A4X1TRU2_PIG	UniProtKB/TrEMBL
	A0A4X1TS20_PIG	UniProtKB/TrEMBL
	A0A5G2QLS7_PIG	UniProtKB/TrEMBL
	A0A5G2QMS9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0RJQ9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1GQJ3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1R7P0	ENTREZGENE, UniProtKB/TrEMBL
	F1SF83_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:86873	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD