INSC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 43,843,568 - 44,015,191 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 43,843,539 - 44,015,266 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 47,050,716 - 47,221,492 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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INSC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 15,111,416 - 15,269,676 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 15,112,424 - 15,247,208 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 15,133,970 - 15,268,754 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 15,090,546 - 15,225,330 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 15,261,213 - 15,395,928 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.2 | NCBI | | | | | HuRef | 11 | 14,817,520 - 14,952,207 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 15,132,981 - 15,268,351 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 15,207,776 - 15,366,083 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Insc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 114,342,931 - 114,449,615 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 114,342,929 - 114,449,618 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 114,743,688 - 114,850,380 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 114,743,694 - 114,850,383 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 121,889,280 - 121,993,894 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 114,583,211 - 114,641,363 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 114,699,353 - 114,804,111 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | F1 | NCBI | | | | | cM Map | 7 | 60.23 | NCBI | | | | |
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Insc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 178,427,360 - 178,534,827 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 168,993,032 - 169,100,438 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 168,993,032 - 169,100,433 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 177,313,540 - 177,420,920 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 184,499,609 - 184,606,997 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 177,206,376 - 177,313,740 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 184,299,200 - 184,407,487 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 184,299,250 - 184,407,480 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 191,272,625 - 191,380,862 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 172,804,412 - 172,913,667 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 172,938,861 - 173,045,793 (+) | NCBI | | | | | Celera | 1 | 166,826,157 - 166,933,448 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q34 | NCBI | | | | |
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Insc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955414 | 30,156,327 - 30,283,146 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 30,181,402 - 30,282,279 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
INSC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 17,481,904 - 17,613,908 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 17,407,636 - 17,574,975 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 15,203,357 - 15,335,341 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 14,892,357 - 15,024,344 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 14,892,357 - 15,024,344 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
INSC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 21 | 37,942,334 - 38,063,690 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 37,942,294 - 38,063,146 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 37,447,110 - 37,565,970 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 39,072,642 - 39,160,340 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 39,039,305 - 39,160,039 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 38,058,728 - 38,177,862 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 38,263,829 - 38,382,671 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 38,551,635 - 38,670,419 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Insc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 47,528,402 - 47,647,823 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936528 | 3,562,854 - 3,681,669 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936528 | 3,562,426 - 3,681,733 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
INSC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 49,674,580 - 49,807,746 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 49,675,737 - 49,807,208 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 147,170,322 - 147,302,423 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Insc (Heterocephalus glaber - naked mole-rat) |
|