WAP (whey acidic protein) - Rat Genome Database

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Gene: WAP (whey acidic protein) Sus scrofa
Analyze
Symbol: WAP
Name: whey acidic protein
RGD ID: 14104721
Description: ENCODES a protein that exhibits peptidase inhibitor activity (inferred); serine-type endopeptidase inhibitor activity (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11850,359,599 - 50,361,906 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21855,190,678 - 55,192,858 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:9513079   PMID:10680116   PMID:11311554   PMID:12759187   PMID:16321438   PMID:22301074  


Genomics

Variants

.
Variants in WAP
79 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system nervous system reproductive system respiratory system
High
Medium
Low 6 1 1 2 9 1 1
Below cutoff 4 2 2

Sequence


Reference Sequences
RefSeq Acc Id: NM_213841   ⟹   NP_999006
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11850,359,886 - 50,361,775 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013985798   ⟹   XP_013841252
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11850,359,599 - 50,361,906 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_013841252   ⟸   XM_013985798
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_999006   ⟸   NM_213841
- Peptide Label: precursor
- UniProtKB: O97559 (UniProtKB/Swiss-Prot),   O46655 (UniProtKB/Swiss-Prot),   A0A8D0JX00 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
WAP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000016731 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSSSCG00005031039 UniProtKB/TrEMBL
  ENSSSCG00015002600 UniProtKB/Swiss-Prot
  ENSSSCG00025007450 UniProtKB/Swiss-Prot
  ENSSSCG00030031546 UniProtKB/Swiss-Prot
  ENSSSCG00035064989 UniProtKB/Swiss-Prot
  ENSSSCG00040015722 UniProtKB/Swiss-Prot
  ENSSSCG00045031688 UniProtKB/Swiss-Prot
  ENSSSCG00050039885 UniProtKB/Swiss-Prot
  ENSSSCG00055023873 UniProtKB/Swiss-Prot
  ENSSSCG00060004478 UniProtKB/Swiss-Prot
  ENSSSCG00065018652 UniProtKB/Swiss-Prot
  ENSSSCG00070015373 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000018212 ENTREZGENE
  ENSSSCT00000018212.5 UniProtKB/Swiss-Prot
  ENSSSCT00005049493.1 UniProtKB/TrEMBL
  ENSSSCT00015003203.1 UniProtKB/Swiss-Prot
  ENSSSCT00025009917.1 UniProtKB/Swiss-Prot
  ENSSSCT00030043698.1 UniProtKB/Swiss-Prot
  ENSSSCT00035087512.1 UniProtKB/Swiss-Prot
  ENSSSCT00040021168.1 UniProtKB/Swiss-Prot
  ENSSSCT00045054069.1 UniProtKB/Swiss-Prot
  ENSSSCT00050053853.1 UniProtKB/Swiss-Prot
  ENSSSCT00055046999.1 UniProtKB/Swiss-Prot
  ENSSSCT00060005564.1 UniProtKB/Swiss-Prot
  ENSSSCT00065024780.1 UniProtKB/Swiss-Prot
  ENSSSCT00070030198.1 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.75.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Elafin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:396835 UniProtKB/Swiss-Prot
NCBI Gene WAP ENTREZGENE
PANTHER WHEY ACDIC PROTEIN WAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WHEY ACIDIC PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam WAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS 4DISULPHCORE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE WAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57256 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8D0JX00 ENTREZGENE, UniProtKB/TrEMBL
  O46655 ENTREZGENE
  O97559 ENTREZGENE
  WAP_PIG UniProtKB/Swiss-Prot
UniProt Secondary O97559 UniProtKB/Swiss-Prot