TMCO6 (transmembrane and coiled-coil domains 6)

Gene: TMCO6 (transmembrane and coiled-coil domains 6) Sus scrofa

Analyze

Symbol:

TMCO6

Name:

transmembrane and coiled-coil domains 6

RGD ID:

14092136

Description:

ENCODES a protein that exhibits nuclear import signal receptor activity (inferred); INVOLVED IN protein import into nucleus (inferred); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transmembrane and coiled-coil domain-containing protein 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	142,352,030 - 142,359,036 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	142,352,006 - 142,359,040 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	148,295,948 - 148,302,984 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant intellectual developmental disorder 31 (ISO)

familial adenomatous polyposis 1 (ISO)

genetic disease (ISO)

Hereditary Neoplastic Syndromes (ISO)

Leigh disease (ISO)

mitochondrial complex I deficiency (ISO)

Neurodevelopmental Disorders (ISO)

nuclear type mitochondrial complex I deficiency 1 (ISO)

nuclear type mitochondrial complex I deficiency 13 (ISO)

RNASET2-deficient cystic leukoencephalopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein import into nucleus (IEA)

Molecular Function

nuclear import signal receptor activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TMCO6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	142,352,030 - 142,359,036 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	142,352,006 - 142,359,040 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	148,295,948 - 148,302,984 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMCO6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	140,596,530 - 140,647,732 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	140,639,435 - 140,645,408 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	140,019,036 - 140,024,989 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	139,999,196 - 140,005,173 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	136,095,757 - 136,101,734 (+)	NCBI		Celera
Cytogenetic Map	5	q31.3	NCBI
HuRef	5	135,164,249 - 135,170,226 (+)	NCBI		HuRef
CHM1_1	5	139,452,252 - 139,458,225 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	141,121,974 - 141,172,663 (+)	NCBI		T2T-CHM13v2.0

Tmco6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	36,868,072 - 36,875,453 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	36,868,092 - 36,875,450 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	36,735,019 - 36,742,400 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	36,735,039 - 36,742,397 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	36,894,724 - 36,902,045 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	36,861,042 - 36,868,371 (+)	NCBI		MGSCv36	mm8
Celera	18	37,187,143 - 37,194,456 (+)	NCBI		Celera
Cytogenetic Map	18	B2	NCBI
cM Map	18	19.46	NCBI

Tmco6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	28,623,269 - 28,629,864 (+)	NCBI		GRCr8
mRatBN7.2	18	28,349,248 - 28,355,843 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	28,349,248 - 28,355,843 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	28,476,398 - 28,482,993 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	29,238,478 - 29,245,067 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	28,573,700 - 28,580,295 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	29,579,145 - 29,585,740 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	29,579,145 - 29,585,740 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	29,282,952 - 29,289,547 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	29,435,248 - 29,441,843 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	29,462,029 - 29,466,164 (+)	NCBI
Celera	18	28,069,801 - 28,076,396 (+)	NCBI		Celera
Cytogenetic Map	18	p11	NCBI

Tmco6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	55,110 - 61,705 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	55,110 - 61,670 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMCO6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	135,897,098 - 135,903,122 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	134,036,691 - 134,042,673 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	136,003,993 - 136,009,960 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	142,120,756 - 142,126,727 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	142,120,756 - 142,126,727 (+)	Ensembl	panpan1.1		panPan2

TMCO6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	35,797,298 - 35,803,491 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	35,797,464 - 35,803,199 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	32,836,310 - 32,842,502 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	36,252,697 - 36,259,144 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	36,252,863 - 36,258,852 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	33,305,443 - 33,311,513 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	34,173,074 - 34,179,277 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	34,925,782 - 34,931,978 (+)	NCBI		UU_Cfam_GSD_1.0

Tmco6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	152,024,429 - 152,032,212 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	9,579,316 - 9,587,009 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	9,579,316 - 9,587,057 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMCO6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	43,272,568 - 43,278,525 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	43,272,662 - 43,278,223 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	34,605,998 - 34,611,962 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmco6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	33,382,973 - 33,401,509 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	33,383,047 - 33,398,774 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TMCO6
268 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	10	4	3	5	2	23	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003124040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021084892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU459055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01015305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000015700 ⟹ ENSSSCP00000015287

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	142,352,030 - 142,359,036 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000064786 ⟹ ENSSSCP00000055835

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	142,352,018 - 142,359,036 (+)	Ensembl

RefSeq Acc Id:

XM_003124040 ⟹ XP_003124088

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,008 - 142,359,040 (+)	NCBI

Sequence:

show sequence

CCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTGCG
GCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGTTG
CGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGCACTACGGAAGGCGC
GGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGA
GGCCTGTGTGGCCGTCATCCTCGGGGAAGCCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGG
GGGCCAGAGGAAAAGGAGAGAGAGCAGGCTCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTG
AGACACAACAGACCTTCATCAGGCTGGAGGGCAGCATTCGGACTCTGGTGGGGCTCCTGACCAG
CAACCAGGCCCTGCTGCAGCTCGGGGCGGCTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAG
TCTGCGGTGGCCGAGGCCTGCCTGCCAGCCACGTCCTACCTTCTCACCTACCTCTCCGGTCACA
GCGCAGACTTTATAGAGCTTTGTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGAGGCTGT
GAGAAGGCAGCTCCTGCCACAGGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAGTCTCCCCAC
CTGACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAG
AGAAGATCATCCCCTCTGTCCTGGGCTCCACTCTCCCCCAGCACATGCTGCAACTGTTGCAACC
TGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTACATCATCTGC
AGCCAGGTCAACAATGCCCTGCTCATCACCCATGGGGCTCTGTCCACTCTGGGGCTGCTGCTGT
TGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATGCAGGACTAGAGCTGCTGGCATGCCCTGT
GCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTGCACCCGCAG
CTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATCCTCCTGGACTTTTTCCTCCAGAAACAGC
CCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACAACCTCACGGCCAACAGCCCTAGTTTCTG
CACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTGTCTAACGTG
GTGAGCGGATTGGTGCTCACGGTTCTGTGCAACGTTGCAGAGAAAGGTCCTGCTTACTGTCAGC
GTCTCTGGCCAGGGCCCCTGCTCCCCTCCTTGCTGGACACGTTGGCCTTCTCTGACACTGTAGT
AGTAGGCCAGAGCTTGGAGCTGCTGCAGCTGCTGTTCCTCTACCAGCCGGGGGCCGCCCAGGCC
TTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATGAAGAGGTGGCCCAGCTCCAGGATC
GTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACCTGGCCCCTCATAGTCACGTTCTCC
ACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGCCCTTTTTGGGGGTCTGGCACCACA
ATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAGCCAAGACCTCTGAATCCCAGCTCC
TCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAAGGAACTCATTGTGGCCTACTTAAT
CTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAGCTGTGGCTTTTTTGATGGGACAGA
ATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_013995233 ⟹ XP_013850687

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,006 - 142,359,040 (+)	NCBI

Sequence:

show sequence

TTCCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTG
CGGCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGT
TGCGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGGTGCGATGGGCGA
AGGAGCCCGGGAGGTCGCGGCACTACGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGG
CTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGAGGCCTGTGTGGCCGTCATCCTCGGGGAAG
CCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGGGGGCCAGAGGAAAAGGAGAGAGAGCAGGC
TCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTGAGACACAACAGACCTTCATCAGGCTGGAG
GGCAGCATTCGGACTCTGGTGGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTCGGGGCGG
CTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAGTCTGCGGTGGCCGAGGCCTGCCTGCCAGC
CACGTCCTACCTTCTCACCTACCTCTCCGGTCACAGCGCAGACTTTATAACCCTCGAGGACGGG
GGTGCTCCGTCTTCCCCAGCCCGGCCCGAAACAGCGCTTTTGTTGTCCTGCTCTCAGGAGCTTT
GTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACA
GGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAGTCTCCCCACCTGACTGTGCTAGAAGCCCTT
GGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAGAGAAGATCATCCCCTCTGTCC
TGGGCTCCACTCTCCCCCAGCACATGCTGCAACTGTTGCAACCTGGCCCAAAGCTAAGCCTTGG
GGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTACATCATCTGCAGCCAGGTCAACAATGCCCTG
CTCATCACCCATGGGGCTCTGTCCACTCTGGGGCTGCTGCTGTTGGACCTGGCTGGAGCTGTCC
AGAGAACTGAGGATGCAGGACTAGAGCTGCTGGCATGCCCTGTGCTTCGGTGTCTAAGCAACTT
GCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTGCACCCGCAGCTGCGAGATGAGCGTGTCGTG
GCGGCCTTATTTATCCTCCTGGACTTTTTCCTCCAGAAACAGCCCAGCCTGCTTCCTGAGGGCC
TCTGGCTCCTTAACAACCTCACGGCCAACAGCCCTAGTTTCTGCACCTCCTTGCTCTCCCTGGA
TCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTGTCTAACGTGGTGAGCGGATTGGTGCTCACG
GTTCTGTGCAACGTTGCAGAGAAAGGTCCTGCTTACTGTCAGCGTCTCTGGCCAGGGCCCCTGC
TCCCCTCCTTGCTGGACACGTTGGCCTTCTCTGACACTGTAGTAGTAGGCCAGAGCTTGGAGCT
GCTGCAGCTGCTGTTCCTCTACCAGCCGGGGGCCGCCCAGGCCTTCTTACAGCGGTCAGGGCTA
CAGGCCCTCCAGAGGCATGAAGAGGTGGCCCAGCTCCAGGATCGTGTGCGTGCTCTCCAGCAGA
CAGCTCTTCGTGGGTGACCTGGCCCCTCATAGTCACGTTCTCCACTCCTCTCCCACCCCCCATC
TTCCCAGCCTGCACAGAGCCCTTTTTGGGGGTCTGGCACCACAATGACATGTCATGCCTTCTGC
TCCCACACGTAAGCCTAAGCCAAGACCTCTGAATCCCAGCTCCTCCTCTTTCACCCAGGATTGT
GCAGGCAGGAGGACCAGAAGGAACTCATTGTGGCCTACTTAATCTGAGTGTCTGGGATTGCTTT
TTTTCTTTTGCTTTAGCAGCTGTGGCTTTTTTGATGGGACAGAATAAAGTTTTATTTTTATATT
TAA

hide sequence

RefSeq Acc Id:

XM_013995235 ⟹ XP_013850689

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,007 - 142,359,040 (+)	NCBI

Sequence:

show sequence

TCCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTGC
GGCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGTT
GCGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGCACTACGGAAGGCG
CGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAG
AGGCCTGTGTGGCCGTCATCCTCGGGGAAGCCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCG
GGGGCCAGAGGAAAAGGAGAGAGAGCAGGCTCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCT
GAGACACAACAGACCTTCATCAGGCTGGAGGGCAGCATTCGGACTCTGGTGGGGCTCCTGACCA
GCAACCAGGCCCTGCTGCAGCTCGGGGCGGCTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCA
GTCTGCGGTGGCCGAGGCCTGCCTGCCAGCCACGTCCTACCTTCTCACCTACCTCTCCGGTCAC
AGCGCAGACTTTATAACCCTCGAGGACGGGGGTGCTCCGTCTTCCCCAGCCCGGCCCGAAACAG
CGCTTTTGTTGTCCTGCTCTCAGGAGCTTTGTCTGTATACACTGGGTAACCTGATCGTGGAGAG
TGAGGCTGTGAGAAGGCAGCTCCTGCCACAGGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAG
TCTCCCCACCTGACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGG
AAGCTCCAGAGAAGATCATCCCCTCTGTCCTGGGCTCCACTCTCCCCCAGCACATGCTGCAACT
GTTGCAACCTGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTAC
ATCATCTGCAGCCAGGTCAACAATGCCCTGCTCATCACCCATGGGGCTCTGTCCACTCTGGGGC
TGCTGCTGTTGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATGCAGGACTAGAGCTGCTGGC
ATGCCCTGTGCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTG
CACCCGCAGCTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATCCTCCTGGACTTTTTCCTCC
AGAAACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACAACCTCACGGCCAACAGCCC
TAGTTTCTGCACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTG
TCTAACGTGGTGAGCGGATTGGTGCTCACGGTTCTGTGCAACGTTGCAGAGAAAGGTCCTGCTT
ACTGTCAGCGTCTCTGGCCAGGGCCCCTGCTCCCCTCCTTGCTGGACACGTTGGCCTTCTCTGA
CACTGTAGTAGTAGGCCAGAGCTTGGAGCTGCTGCAGCTGCTGTTCCTCTACCAGCCGGGGGCC
GCCCAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATGAAGAGGTGGCCCAGC
TCCAGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACCTGGCCCCTCATAGTC
ACGTTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGCCCTTTTTGGGGGTCT
GGCACCACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAGCCAAGACCTCTGAAT
CCCAGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAAGGAACTCATTGTGGC
CTACTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAGCTGTGGCTTTTTTGA
TGGGACAGAATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_013995236 ⟹ XP_013850690

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,006 - 142,359,040 (+)	NCBI

Sequence:

show sequence

TTCCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTG
CGGCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGT
TGCGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGCACTACGGAAGGCGCGG
AGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGAGG
CCTGTGTGGCCGTCATCCTCGGGGAAGCCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGGGG
GCCAGAGGAAAAGGAGAGAGAGCAGGCTCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTGAG
ACACAACAGACCTTCATCAGGCTGGAGGGCAGCATTCGGACTCTGGTGGGGCTCCTGACCAGCA
ACCAGGCCCTGCTGCAGCTCGGGGCGGCTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAGTC
TGCGGTGGCCGAGGCCTGCCTGCCAGCCACGTCCTACCTTCTCACCTACCTCTCCGGTCACAGC
GCAGACTTTATAACCCTCGAGGACGGGGGTGCTCCGTCTTCCCCAGCCCGGCCCGAAACAGCGC
TTTTGTTGTCCTGCTCTCAGGAGCTTTGTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGA
GGCTGTGAGAAGGCAGCTCCTGCCACAGGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAGTCT
CCCCACCTGACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAG
CTCCAGAGAAGATCATCCCCTCTGTCCTGGGCTCCACTCTCCCCCAGCACATGCTGCAACTGTT
GCAACCTGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTACATC
ATCTGCAGCCAGGTCAACAATGCCCTGCTCATCACCCATGGGGCTCTGTCCACTCTGGGGCTGC
TGCTGTTGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATGCAGGACTAGAGCTGCTGGCATG
CCCTGTGCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTGCAC
CCGCAGCTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATCCTCCTGGACTTTTTCCTCCAGA
AACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACAACCTCACGGCCAACAGCCCTAG
TTTCTGCACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTGTCT
AACGTGGTGAGCGGATTGGTGCTCACGGTTCTGTGCAACGTTGCAGAGAAAGGTCCTGCTTACT
GTCAGCGTCTCTGGCCAGGGCCCCTGCTCCCCTCCTTGCTGGACACGTTGGCCTTCTCTGACAC
TGTAGTAGTAGGCCAGAGCTTGGAGCTGCTGCAGCTGCTGTTCCTCTACCAGCCGGGGGCCGCC
CAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATGAAGAGGTGGCCCAGCTCC
AGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACCTGGCCCCTCATAGTCACG
TTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGCCCTTTTTGGGGGTCTGGC
ACCACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAGCCAAGACCTCTGAATCCC
AGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAAGGAACTCATTGTGGCCTA
CTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAGCTGTGGCTTTTTTGATGG
GACAGAATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_013995237 ⟹ XP_013850691

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,007 - 142,359,040 (+)	NCBI

Sequence:

show sequence

TCCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTGC
GGCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGTT
GCGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGGTGCGATGGGCGAA
GGAGCCCGGGAGGTCGCGGCACTACGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGC
TGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGAGGCCTGTGTGGCCGTCATCCTCGGGGAAGC
CGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGGGGGCCAGAGGAAAAGGAGAGAGAGCAGGCT
CTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTGAGACACAACAGACCTTCATCAGGCTGGAGG
GCAGCATTCGGACTCTGGTGGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTCGGGGCGGC
TCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAGTCTGCGGTGGCCGAGGCCTGCCTGCCAGCC
ACGTCCTACCTTCTCACCTACCTCTCCGGTCACAGCGCAGACTTTATAGAGCTTTGTCTGTATA
CACTGGGTAACCTGATCGTGGAGAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACAGGGCATTGT
TCCAGCCTTGGCTGCCTGCATCCAGTCTCCCCACCTGACTGTGCTAGAAGCCCTTGGATACGCC
TTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAGAGAAGATCATCCCCTCTGTCCTGGGCTCCA
CTCTCCCCCAGCACATGCTGCAACTGTTGCAACCTGGCCCAAAGCTAAGCCTTGGGGTCGCTGT
GGAGTTTGCCTGGTGCCTTCACTACATCATCTGCAGCCAGGTCAACAATGCCCTGCTCATCACC
CATGGGGCTCTGTCCACTCTGGGGCTGCTGCTGTTGGACCTGGCTGGAGCTGTCCAGAGAACTG
AGGATGCAGGACTAGAGCTGCTGGCATGCCCTGTGCTTCGGTGTCTAAGCAACTTGCTAACAGA
GGCTGCAGTGGAGGCTGTGGGAGTGCACCCGCAGCTGCGAGATGAGCGTGTCGTGGCGGCCTTA
TTTATCCTCCTGGACTTTTTCCTCCAGAAACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCC
TTAACAACCTCACGGCCAACAGCCCTAGTTTCTGCACCTCCTTGCTCTCCCTGGATCTGACCGA
GCCCCTCTTGCAGTTGTTGTCAGTGTCTAACGTGGTGAGCGGATTGGTGCTCACGGTTCTGTGC
AACGTTGCAGAGAAAGGTCCTGCTTACTGTCAGCGTCTCTGGCCAGGGCCCCTGCTCCCCTCCT
TGCTGGACACGTTGGCCTTCTCTGACACTGTAGTAGTAGGCCAGAGCTTGGAGCTGCTGCAGCT
GCTGTTCCTCTACCAGCCGGGGGCCGCCCAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTC
CAGAGGCATGAAGAGGTGGCCCAGCTCCAGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTC
GTGGGTGACCTGGCCCCTCATAGTCACGTTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCC
TGCACAGAGCCCTTTTTGGGGGTCTGGCACCACAATGACATGTCATGCCTTCTGCTCCCACACG
TAAGCCTAAGCCAAGACCTCTGAATCCCAGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGG
AGGACCAGAAGGAACTCATTGTGGCCTACTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTT
GCTTTAGCAGCTGTGGCTTTTTTGATGGGACAGAATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_013995238 ⟹ XP_013850692

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,014 - 142,359,040 (+)	NCBI

Sequence:

show sequence

TGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTGCGGCAGCA
CTACGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAGACGAAACCTCGG
AGGAAGCCGAAGAGGCCTGTGTGGCCGTCATCCTCGGGGAAGCCGAGATCCAGCAGTTCCTGCG
GTTAGCTCAGCGGGGGCCAGAGGAAAAGGAGAGAGAGCAGGCTCTGGTCAGCCTTCGCCGAGGC
TTGCAGCATCCTGAGACACAACAGACCTTCATCAGGCTGGAGGGCAGCATTCGGACTCTGGTGG
GGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTCGGGGCGGCTCGGTGCCTTCATGAGCTCTC
TCACTCTGAGCAGTCTGCGGTGGCCGAGGCCTGCCTGCCAGCCACGTCCTACCTTCTCACCTAC
CTCTCCGGTCACAGCGCAGACTTTATAACCCTCGAGGACGGGGGTGCTCCGTCTTCCCCAGCCC
GGCCCGAAACAGCGCTTTTGTTGTCCTGCTCTCAGGAGCTTTGTCTGTATACACTGGGTAACCT
GATCGTGGAGAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACAGGGCATTGTTCCAGCCTTGGCT
GCCTGCATCCAGTCTCCCCACCTGACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTC
TGCAGGCTAAGGAAGCTCCAGAGAAGATCATCCCCTCTGTCCTGGGCTCCACTCTCCCCCAGCA
CATGCTGCAACTGTTGCAACCTGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTTTGCCTGG
TGCCTTCACTACATCATCTGCAGCCAGGTCAACAATGCCCTGCTCATCACCCATGGGGCTCTGT
CCACTCTGGGGCTGCTGCTGTTGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATGCAGGACT
AGAGCTGCTGGCATGCCCTGTGCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGCAGTGGAG
GCTGTGGGAGTGCACCCGCAGCTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATCCTCCTGG
ACTTTTTCCTCCAGAAACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACAACCTCAC
GGCCAACAGCCCTAGTTTCTGCACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCTCTTGCAG
TTGTTGTCAGTGTCTAACGTGGTGAGCGGATTGGTGCTCACGGTTCTGTGCAACGTTGCAGAGA
AAGGTCCTGCTTACTGTCAGCGTCTCTGGCCAGGGCCCCTGCTCCCCTCCTTGCTGGACACGTT
GGCCTTCTCTGACACTGTAGTAGTAGGCCAGAGCTTGGAGCTGCTGCAGCTGCTGTTCCTCTAC
CAGCCGGGGGCCGCCCAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATGAAG
AGGTGGCCCAGCTCCAGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACCTGG
CCCCTCATAGTCACGTTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGCCCT
TTTTGGGGGTCTGGCACCACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAGCCA
AGACCTCTGAATCCCAGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAAGGA
ACTCATTGTGGCCTACTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAGCTG
TGGCTTTTTTGATGGGACAGAATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_013995239 ⟹ XP_013850693

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,006 - 142,359,035 (+)	NCBI

Sequence:

show sequence

TTCCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTG
CGGCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGT
TGCGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGGTGCGATGGGCGA
AGGAGCCCGGGAGGTCGCGGCACTACGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGG
CTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGAGGCCTGTGTGGCCGTCATCCTCGGGGAAG
CCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGGGGGCCAGAGGAAAAGGAGAGAGAGCAGGC
TCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTGAGACACAACAGACCTTCATCAGGCTGGAG
GGCAGCATTCGGACTCTGGTGGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTCGGGGCGG
CTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAGTCTGCGGTGGCCGAGGCCTGCCTGCCAGC
CACGTCCTACCTTCTCACCTACCTCTCCGGTCACAGCGCAGACTTTATAACCCTCGAGGACGGG
GGTGCTCCGTCTTCCCCAGCCCGGCCCGAAACAGCGCTTTTGTTGTCCTGCTCTCAGGAGCTTT
GTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACA
GGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAGTCTCCCCACCTGACTGTGCTAGAAGCCCTT
GGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAGAGAAGATCATCCCCTCTGTCC
TGGGCTCCACTCTCCCCCAGCACATGCTGCAACTGTTGCAACCTGGCCCAAAGCTAAGCCTTGG
GGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTACATCATCTGCAGCCAGGTCAACAATGCCCTG
CTCATCACCCATGGGGCTCTGTCCACTCTGGGGCTGCTGCTGTTGGACCTGGCTGGAGCTGTCC
AGAGAACTGAGGATGCAGGACTAGAGCTGCTGGCATGCCCTGTGCTTCGGTGTCTAAGCAACTT
GCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTGCACCCGCAGCTGCGAGATGAGCGTGTCGTG
GCGGCCTTATTTATCCTCCTGGACTTTTTCCTCCAGAAACAGCCCAGCCTGCTTCCTGAGGGCC
TCTGGCTCCTTAACAACCTCACGGCCAACAGCCCTAGTTTCTGCACCTCCTTGCTCTCCCTGGA
TCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTGTCTAACGTGGTGAGCGGATTGGCCGCCCAG
GCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATGAAGAGGTGGCCCAGCTCCAGG
ATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACCTGGCCCCTCATAGTCACGTTC
TCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGCCCTTTTTGGGGGTCTGGCACC
ACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAGCCAAGACCTCTGAATCCCAGC
TCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAAGGAACTCATTGTGGCCTACTT
AATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAGCTGTGGCTTTTTTGATGGGAC
AGAATAAAGTTTTATTTTTATA

hide sequence

RefSeq Acc Id:

XM_013995240 ⟹ XP_013850694

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,356,488 - 142,359,040 (+)	NCBI

Sequence:

show sequence

AAACCTTACGGCCTGGGTTCCAGAGTCAGATCCCGACTCTGTCTGCTTCTAGTCTCCCCACCTG
ACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAGAGA
AGATCATCCCTTGCCATTCACAGCTCTGCTTCTACTGACAGCTCTGTCCTGGGCTCCACTCTCC
CCCAGCACATGCTGCAACTGTTGCAACCTGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTT
TGCCTGGTGCCTTCACTACATCATCTGCAGCCAGGTCAACAATGCCCTGCTCATCACCCATGGG
GCTCTGTCCACTCTGGGGCTGCTGCTGTTGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATG
CAGGACTAGAGCTGCTGGCATGCCCTGTGCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGC
AGTGGAGGCTGTGGGAGTGCACCCGCAGCTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATC
CTCCTGGACTTTTTCCTCCAGAAACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACA
ACCTCACGGCCAACAGCCCTAGTTTCTGCACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCT
CTTGCAGTTGTTGTCAGTGTCTAACGTGGTGAGCGGATTGGTGCTCACGGTTCTGTGCAACGTT
GCAGAGAAAGGTCCTGCTTACTGTCAGCGTCTCTGGCCAGGGCCCCTGCTCCCCTCCTTGCTGG
ACACGTTGGCCTTCTCTGACACTGTAGTAGTAGGCCAGAGCTTGGAGCTGCTGCAGCTGCTGTT
CCTCTACCAGCCGGGGGCCGCCCAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGG
CATGAAGAGGTGGCCCAGCTCCAGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGT
GACCTGGCCCCTCATAGTCACGTTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACA
GAGCCCTTTTTGGGGGTCTGGCACCACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCC
TAAGCCAAGACCTCTGAATCCCAGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACC
AGAAGGAACTCATTGTGGCCTACTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTA
GCAGCTGTGGCTTTTTTGATGGGACAGAATAAAGTTTTATTTTTATATTTAA

hide sequence

RefSeq Acc Id:

XM_021084892 ⟹ XP_020940551

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,352,008 - 142,359,035 (+)	NCBI

Sequence:

show sequence

CCGCCCTGCGCCGCGACTGCGCAGTCCGCACCGCCTTTTGGGCGCTGAGGCCGCCTTCCCTGCG
GCAGGTACAGGTTTCTTGCAGCTCCACCATGTGGAGCCAGCGGCAGGGCCGCCTCAGGCCGTTG
CGCTGTGGGGTGGAGGAGCTCCGGCGCCGCCGGCGGGAGCAAGAGGCAGCACTACGGAAGGCGC
GGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAGACGAAACCTCGGAGGAAGCCGAAGA
GGCCTGTGTGGCCGTCATCCTCGGGGAAGCCGAGATCCAGCAGTTCCTGCGGTTAGCTCAGCGG
GGGCCAGAGGAAAAGGAGAGAGAGCAGGCTCTGGTCAGCCTTCGCCGAGGCTTGCAGCATCCTG
AGACACAACAGACCTTCATCAGGCTGGAGGGCAGCATTCGGACTCTGGTGGGGCTCCTGACCAG
CAACCAGGCCCTGCTGCAGCTCGGGGCGGCTCGGTGCCTTCATGAGCTCTCTCACTCTGAGCAG
TCTGCGGTGGCCGAGGCCTGCCTGCCAGCCACGTCCTACCTTCTCACCTACCTCTCCGGTCACA
GCGCAGACTTTATAGAGCTTTGTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGAGGCTGT
GAGAAGGCAGCTCCTGCCACAGGGCATTGTTCCAGCCTTGGCTGCCTGCATCCAGTCTCCCCAC
CTGACTGTGCTAGAAGCCCTTGGATACGCCTTGGCCCAGCTTCTGCAGGCTAAGGAAGCTCCAG
AGAAGATCATCCCCTCTGTCCTGGGCTCCACTCTCCCCCAGCACATGCTGCAACTGTTGCAACC
TGGCCCAAAGCTAAGCCTTGGGGTCGCTGTGGAGTTTGCCTGGTGCCTTCACTACATCATCTGC
AGCCAGGTCAACAATGCCCTGCTCATCACCCATGGGGCTCTGTCCACTCTGGGGCTGCTGCTGT
TGGACCTGGCTGGAGCTGTCCAGAGAACTGAGGATGCAGGACTAGAGCTGCTGGCATGCCCTGT
GCTTCGGTGTCTAAGCAACTTGCTAACAGAGGCTGCAGTGGAGGCTGTGGGAGTGCACCCGCAG
CTGCGAGATGAGCGTGTCGTGGCGGCCTTATTTATCCTCCTGGACTTTTTCCTCCAGAAACAGC
CCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTTAACAACCTCACGGCCAACAGCCCTAGTTTCTG
CACCTCCTTGCTCTCCCTGGATCTGACCGAGCCCCTCTTGCAGTTGTTGTCAGTGTCTAACGTG
GTGAGCGGATTGGCCGCCCAGGCCTTCTTACAGCGGTCAGGGCTACAGGCCCTCCAGAGGCATG
AAGAGGTGGCCCAGCTCCAGGATCGTGTGCGTGCTCTCCAGCAGACAGCTCTTCGTGGGTGACC
TGGCCCCTCATAGTCACGTTCTCCACTCCTCTCCCACCCCCCATCTTCCCAGCCTGCACAGAGC
CCTTTTTGGGGGTCTGGCACCACAATGACATGTCATGCCTTCTGCTCCCACACGTAAGCCTAAG
CCAAGACCTCTGAATCCCAGCTCCTCCTCTTTCACCCAGGATTGTGCAGGCAGGAGGACCAGAA
GGAACTCATTGTGGCCTACTTAATCTGAGTGTCTGGGATTGCTTTTTTTCTTTTGCTTTAGCAG
CTGTGGCTTTTTTGATGGGACAGAATAAAGTTTTATTTTTATA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003124088	(Get FASTA)	NCBI Sequence Viewer
	XP_013850687	(Get FASTA)	NCBI Sequence Viewer
	XP_013850689	(Get FASTA)	NCBI Sequence Viewer
	XP_013850690	(Get FASTA)	NCBI Sequence Viewer
	XP_013850691	(Get FASTA)	NCBI Sequence Viewer
	XP_013850692	(Get FASTA)	NCBI Sequence Viewer
	XP_013850693	(Get FASTA)	NCBI Sequence Viewer
	XP_013850694	(Get FASTA)	NCBI Sequence Viewer
	XP_020940551	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000015287
	ENSSSCP00000015287.4
	ENSSSCP00015003035.1
	ENSSSCP00015003048.1
	ENSSSCP00015003057.1
	ENSSSCP00025030653.1
	ENSSSCP00025030722.1
	ENSSSCP00030019668.1
	ENSSSCP00035045516.1
	ENSSSCP00035045540.1
	ENSSSCP00040039821.1
	ENSSSCP00040039894.1
	ENSSSCP00045018972.1
	ENSSSCP00050047766.1
	ENSSSCP00055004591.1
	ENSSSCP00060023088.1
	ENSSSCP00060023094.1
	ENSSSCP00065028659.1
	ENSSSCP00065028673.1

RefSeq Acc Id:	XP_013850687 ⟸ XM_013995233
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1VDQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAGAMGEGAREVAALRKARREQQLVSKRLLRDETSEEA EEACVAVILGEAEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLL TSNQALLQLGAARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFITLEDGGAPSSPARPE TALLLSCSQELCLYTLGNLIVESEAVRRQLLPQGIVPALAACIQSPHLTVLEALGYALAQLLQA KEAPEKIIPSVLGSTLPQHMLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTL GLLLLDLAGAVQRTEDAGLELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFF LQKQPSLLPEGLWLLNNLTANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGP AYCQRLWPGPLLPSLLDTLAFSDTVVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVA QLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850690 ⟸ XM_013995236
- Peptide Label:	isoform X7
- UniProtKB:	A0A8D1Z8L0 (UniProtKB/TrEMBL), A0A8D0TUK2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGL ELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLT ANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPLLPSLLDTL AFSDTVVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850693 ⟸ XM_013995239
- Peptide Label:	isoform X5
- UniProtKB:	A0A8D1VDQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAGAMGEGAREVAALRKARREQQLVSKRLLRDETSEEA EEACVAVILGEAEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLL TSNQALLQLGAARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFITLEDGGAPSSPARPE TALLLSCSQELCLYTLGNLIVESEAVRRQLLPQGIVPALAACIQSPHLTVLEALGYALAQLLQA KEAPEKIIPSVLGSTLPQHMLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTL GLLLLDLAGAVQRTEDAGLELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFF LQKQPSLLPEGLWLLNNLTANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLAAQAFLQRSGLQA LQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850691 ⟸ XM_013995237
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D0MIF9 (UniProtKB/TrEMBL), A0A8D1Z1P8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAGAMGEGAREVAALRKARREQQLVSKRLLRDETSEEA EEACVAVILGEAEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLL TSNQALLQLGAARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFIELCLYTLGNLIVESE AVRRQLLPQGIVPALAACIQSPHLTVLEALGYALAQLLQAKEAPEKIIPSVLGSTLPQHMLQLL QPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGLELLAC PVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLTANSPS FCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPLLPSLLDTLAFSDT VVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850689 ⟸ XM_013995235
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1PK80 (UniProtKB/TrEMBL), F1RGE4 (UniProtKB/TrEMBL), A0A8D1VDQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAALRKARREQQLVSKRLLRDETSEEAEEACVAVILGE AEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLLTSNQALLQLGA ARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFITLEDGGAPSSPARPETALLLSCSQEL CLYTLGNLIVESEAVRRQLLPQGIVPALAACIQSPHLTVLEALGYALAQLLQAKEAPEKIIPSV LGSTLPQHMLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAV QRTEDAGLELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEG LWLLNNLTANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPL LPSLLDTLAFSDTVVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQ TALRG hide sequence

RefSeq Acc Id:	XP_003124088 ⟸ XM_003124040
- Peptide Label:	isoform X4
- UniProtKB:	A0A8D0MIF9 (UniProtKB/TrEMBL), A0A8D1Z1P8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAALRKARREQQLVSKRLLRDETSEEAEEACVAVILGE AEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLLTSNQALLQLGA ARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFIELCLYTLGNLIVESEAVRRQLLPQGI VPALAACIQSPHLTVLEALGYALAQLLQAKEAPEKIIPSVLGSTLPQHMLQLLQPGPKLSLGVA VEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGLELLACPVLRCLSNLLT EAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLTANSPSFCTSLLSLDLT EPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPLLPSLLDTLAFSDTVVVGQSLELLQ LLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_020940551 ⟸ XM_021084892
- Peptide Label:	isoform X6
- UniProtKB:	A0A480QJS8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWSQRQGRLRPLRCGVEELRRRRREQEAALRKARREQQLVSKRLLRDETSEEAEEACVAVILGE AEIQQFLRLAQRGPEEKEREQALVSLRRGLQHPETQQTFIRLEGSIRTLVGLLTSNQALLQLGA ARCLHELSHSEQSAVAEACLPATSYLLTYLSGHSADFIELCLYTLGNLIVESEAVRRQLLPQGI VPALAACIQSPHLTVLEALGYALAQLLQAKEAPEKIIPSVLGSTLPQHMLQLLQPGPKLSLGVA VEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGLELLACPVLRCLSNLLT EAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLTANSPSFCTSLLSLDLT EPLLQLLSVSNVVSGLAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850692 ⟸ XM_013995238
- Peptide Label:	isoform X7
- UniProtKB:	A0A8D1Z8L0 (UniProtKB/TrEMBL), A0A8D0TUK2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGL ELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLT ANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPLLPSLLDTL AFSDTVVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:	XP_013850694 ⟸ XM_013995240
- Peptide Label:	isoform X7
- UniProtKB:	A0A8D1Z8L0 (UniProtKB/TrEMBL), A0A8D0TUK2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQLLQPGPKLSLGVAVEFAWCLHYIICSQVNNALLITHGALSTLGLLLLDLAGAVQRTEDAGL ELLACPVLRCLSNLLTEAAVEAVGVHPQLRDERVVAALFILLDFFLQKQPSLLPEGLWLLNNLT ANSPSFCTSLLSLDLTEPLLQLLSVSNVVSGLVLTVLCNVAEKGPAYCQRLWPGPLLPSLLDTL AFSDTVVVGQSLELLQLLFLYQPGAAQAFLQRSGLQALQRHEEVAQLQDRVRALQQTALRG hide sequence

RefSeq Acc Id:

ENSSSCP00000015287 ⟸ ENSSSCT00000015700

RefSeq Acc Id:

ENSSSCP00000055835 ⟸ ENSSSCT00000064786

Protein Domains

IBB

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000014370	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015005670	UniProtKB/TrEMBL
	ENSSSCG00025051839	UniProtKB/TrEMBL
	ENSSSCG00030031367	UniProtKB/TrEMBL
	ENSSSCG00035077644	UniProtKB/TrEMBL
	ENSSSCG00040066307	UniProtKB/TrEMBL
	ENSSSCG00045016148	UniProtKB/TrEMBL
	ENSSSCG00050078258	UniProtKB/TrEMBL
	ENSSSCG00055003035	UniProtKB/TrEMBL
	ENSSSCG00060039970	UniProtKB/TrEMBL
	ENSSSCG00065048356	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000015700	ENTREZGENE
	ENSSSCT00000015700.5	UniProtKB/TrEMBL
	ENSSSCT00015007550.1	UniProtKB/TrEMBL
	ENSSSCT00015007577.1	UniProtKB/TrEMBL
	ENSSSCT00015007594.1	UniProtKB/TrEMBL
	ENSSSCT00025070887.1	UniProtKB/TrEMBL
	ENSSSCT00025071019.1	UniProtKB/TrEMBL
	ENSSSCT00030043474.1	UniProtKB/TrEMBL
	ENSSSCT00035105835.1	UniProtKB/TrEMBL
	ENSSSCT00035105887.1	UniProtKB/TrEMBL
	ENSSSCT00040090557.1	UniProtKB/TrEMBL
	ENSSSCT00040090695.1	UniProtKB/TrEMBL
	ENSSSCT00045027460.1	UniProtKB/TrEMBL
	ENSSSCT00050107863.1	UniProtKB/TrEMBL
	ENSSSCT00055005877.1	UniProtKB/TrEMBL
	ENSSSCT00060054132.1	UniProtKB/TrEMBL
	ENSSSCT00060054141.1	UniProtKB/TrEMBL
	ENSSSCT00065066156.1	UniProtKB/TrEMBL
	ENSSSCT00065066182.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Armadillo	UniProtKB/TrEMBL
	Importin-a_IBB	UniProtKB/TrEMBL
NCBI Gene	TMCO6	ENTREZGENE
PANTHER	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6	UniProtKB/TrEMBL
	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6	UniProtKB/TrEMBL
PROSITE	IBB	UniProtKB/TrEMBL
SMART	ARM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A480QJS8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0MIF9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0TUK2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1BCC2_PIG	UniProtKB/TrEMBL
	A0A8D1C5P1_PIG	UniProtKB/TrEMBL
	A0A8D1FT72_PIG	UniProtKB/TrEMBL
	A0A8D1PK80	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1VDQ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1Z1P8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1Z8L0	ENTREZGENE, UniProtKB/TrEMBL
	F1RGE4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:94052	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar