LUM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 91,748,885 - 91,757,598 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 91,748,871 - 91,756,381 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 96,175,872 - 96,183,382 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LUM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 91,102,629 - 91,111,494 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 91,102,629 - 91,111,494 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 91,496,406 - 91,505,271 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 90,021,363 - 90,029,673 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 89,999,795 - 90,007,762 | NCBI | | | | | Celera | 12 | 91,168,384 - 91,176,693 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q21.33 | NCBI | | | | | HuRef | 12 | 88,565,018 - 88,573,311 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 91,462,214 - 91,470,560 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 91,080,108 - 91,088,974 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lum (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 97,401,363 - 97,408,565 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 97,400,990 - 97,408,565 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 97,565,501 - 97,572,703 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 97,565,128 - 97,572,703 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 97,028,135 - 97,035,337 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 96,995,518 - 97,002,392 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 99,536,481 - 99,543,683 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | C3 | NCBI | | | | | cM Map | 10 | 50.32 | NCBI | | | | |
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Lum (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 34,245,323 - 34,252,510 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 32,358,990 - 32,365,794 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 32,358,614 - 32,365,793 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 34,326,157 - 34,332,958 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 36,514,385 - 36,521,189 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 36,248,713 - 36,255,514 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 38,820,058 - 38,826,862 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 38,819,771 - 38,826,862 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 38,861,407 - 38,868,211 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 35,083,480 - 35,090,284 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 35,103,750 - 35,110,554 (+) | NCBI | | | | | Celera | 7 | 29,396,589 - 29,403,393 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q13 | NCBI | | | | |
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Lum (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955405 | 28,298,988 - 28,308,054 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 28,299,966 - 28,307,982 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LUM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 99,136,692 - 99,144,880 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 99,133,086 - 99,141,066 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 88,636,825 - 88,644,665 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 91,952,277 - 91,960,388 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 91,952,277 - 91,960,388 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LUM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 15 | 31,792,872 - 31,800,444 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 31,793,233 - 31,800,912 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 32,247,441 - 32,254,994 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 32,449,009 - 32,456,782 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 32,449,009 - 32,456,645 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 31,741,534 - 31,749,085 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 31,805,190 - 31,812,738 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 32,098,606 - 32,106,158 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lum (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 28,380,086 - 28,387,678 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936507 | 7,846,681 - 7,855,455 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936507 | 7,847,761 - 7,855,311 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LUM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 86,510,824 - 86,519,008 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 86,509,722 - 86,519,010 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 158,664,710 - 158,672,984 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lum (Heterocephalus glaber - naked mole-rat) |
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