CLEC16A (C-type lectin domain containing 16A) - Rat Genome Database

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Gene: CLEC16A (C-type lectin domain containing 16A) Sus scrofa
Analyze
Symbol: CLEC16A
Name: C-type lectin domain containing 16A
RGD ID: 14060723
Description: INVOLVED IN negative regulation of mitophagy (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH Addison's disease (ortholog); Charcot-Marie-Tooth disease type 1C (ortholog); immunoglobulin alpha deficiency (ortholog); FOUND IN cytosol (inferred); endolysosome membrane (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein CLEC16A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl331,938,135 - 32,158,320 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1331,938,133 - 32,158,343 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2332,799,756 - 32,868,904 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
CLEC16A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl331,938,135 - 32,158,320 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1331,938,133 - 32,158,343 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2332,799,756 - 32,868,904 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CLEC16A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381610,944,564 - 11,182,186 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1610,944,539 - 11,182,186 (+)EnsemblGRCh38hg38GRCh38
GRCh371611,038,421 - 11,276,043 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361610,945,943 - 11,183,539 (+)NCBINCBI36Build 36hg18NCBI36
Celera1611,207,780 - 11,445,485 (+)NCBICelera
Cytogenetic Map16p13.13NCBI
HuRef1610,955,943 - 11,193,891 (+)NCBIHuRef
CHM1_11611,038,266 - 11,275,979 (+)NCBICHM1_1
T2T-CHM13v2.01610,980,535 - 11,218,466 (+)NCBIT2T-CHM13v2.0
Clec16a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391610,363,173 - 10,562,742 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1610,363,203 - 10,562,742 (+)EnsemblGRCm39 Ensembl
GRCm381610,545,309 - 10,744,878 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1610,545,339 - 10,744,878 (+)EnsemblGRCm38mm10GRCm38
MGSCv371610,545,480 - 10,744,964 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361610,458,965 - 10,658,449 (+)NCBIMGSCv36mm8
Celera1611,178,067 - 11,375,698 (+)NCBICelera
Cytogenetic Map16A1NCBI
cM Map165.68NCBI
Clec16a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8105,434,725 - 5,631,246 (-)NCBIGRCr8
mRatBN7.2104,927,799 - 5,123,749 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl104,928,030 - 5,123,578 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx109,624,383 - 9,820,126 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0109,145,490 - 9,341,240 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0104,783,769 - 4,979,511 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0105,002,196 - 5,196,914 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl105,009,826 - 5,196,892 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0103,827,156 - 4,020,226 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4104,870,719 - 5,069,691 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1104,873,502 - 5,072,213 (-)NCBI
Celera103,948,821 - 4,141,759 (-)NCBICelera
Cytogenetic Map10q11NCBI
Clec16a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554427,368,952 - 7,584,703 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554427,369,616 - 7,584,052 (-)NCBIChiLan1.0ChiLan1.0
CLEC16A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21811,495,055 - 11,731,694 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11615,270,314 - 15,506,950 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0169,887,877 - 10,124,500 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11611,109,639 - 11,346,971 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1611,109,869 - 11,343,512 (+)Ensemblpanpan1.1panPan2
CLEC16A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1631,560,940 - 31,757,100 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl631,562,834 - 31,757,678 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha632,943,444 - 33,139,557 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0631,743,163 - 31,939,531 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl631,743,173 - 31,939,523 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1631,556,477 - 31,752,772 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0631,430,738 - 31,627,044 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0631,855,194 - 32,051,540 (-)NCBIUU_Cfam_GSD_1.0
Clec16a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344111,244,073 - 111,419,122 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365309,089,476 - 9,264,592 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365309,089,478 - 9,264,563 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CLEC16A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1510,420,866 - 10,658,370 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl510,420,931 - 10,658,507 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606819,506,544 - 19,745,864 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Clec16a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248248,174,610 - 8,400,723 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248248,174,653 - 8,400,760 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CLEC16A
4219 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 4 3 5 2 23 2 3 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021086613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021086634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK347606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK352464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GACC01000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01035926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSSCT00000024144   ⟹   ENSSSCP00000027472
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl331,938,135 - 32,158,320 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000035852   ⟹   ENSSSCP00000030556
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl331,938,135 - 32,158,320 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000069170   ⟹   ENSSSCP00000068318
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl331,938,135 - 32,158,320 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000073728   ⟹   ENSSSCP00000060904
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl331,938,135 - 32,140,586 (-)Ensembl
RefSeq Acc Id: XM_021086613   ⟹   XP_020942272
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086614   ⟹   XP_020942273
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086615   ⟹   XP_020942274
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086616   ⟹   XP_020942275
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086617   ⟹   XP_020942276
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,343 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086618   ⟹   XP_020942277
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086619   ⟹   XP_020942278
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086621   ⟹   XP_020942280
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086622   ⟹   XP_020942281
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,138,864 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086623   ⟹   XP_020942282
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086624   ⟹   XP_020942283
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,942,328 - 32,158,343 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086625   ⟹   XP_020942284
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086626   ⟹   XP_020942285
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086627   ⟹   XP_020942286
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086628   ⟹   XP_020942287
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,987,396 - 32,158,343 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086629   ⟹   XP_020942288
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086630   ⟹   XP_020942289
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086631   ⟹   XP_020942290
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,959,151 - 32,158,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086632   ⟹   XP_020942291
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,140,249 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086633   ⟹   XP_020942292
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,341 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021086634   ⟹   XP_020942293
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1331,938,133 - 32,158,341 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020942272 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942273 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942274 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942275 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942276 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942277 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942278 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942280 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942281 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942282 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942283 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942284 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942285 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942286 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942287 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942288 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942289 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942290 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942291 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942292 (Get FASTA)   NCBI Sequence Viewer  
  XP_020942293 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000027472.3
  ENSSSCP00000030556
  ENSSSCP00000030556.4
  ENSSSCP00000068318
  ENSSSCP00000068318.2
  ENSSSCP00005023786.1
  ENSSSCP00005023849.1
  ENSSSCP00005023954.1
  ENSSSCP00005024032.1
  ENSSSCP00015028234.1
  ENSSSCP00015028262.1
  ENSSSCP00015028319.1
  ENSSSCP00015028407.1
  ENSSSCP00015028497.1
  ENSSSCP00015028556.1
  ENSSSCP00025026716.1
  ENSSSCP00025026869.1
  ENSSSCP00025027028.1
  ENSSSCP00030019915.1
  ENSSSCP00030019928.1
  ENSSSCP00030019944.1
  ENSSSCP00030019965.1
  ENSSSCP00035027280.1
  ENSSSCP00035027281.1
  ENSSSCP00035027284.1
  ENSSSCP00040006816.1
  ENSSSCP00040006838.1
  ENSSSCP00040006859.1
  ENSSSCP00040006905.1
  ENSSSCP00040006930.1
  ENSSSCP00050046393.1
  ENSSSCP00050046396.1
  ENSSSCP00055019870.1
  ENSSSCP00055020070.1
  ENSSSCP00055020144.1
  ENSSSCP00060044600.1
  ENSSSCP00060044631.1
  ENSSSCP00060044656.1
  ENSSSCP00060044679.1
  ENSSSCP00060044719.1
  ENSSSCP00065046309.1
  ENSSSCP00065046313.1
  ENSSSCP00065046315.1
  ENSSSCP00065046323.1
GenBank Protein JAA53719 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_020942276   ⟸   XM_021086617
- Peptide Label: isoform X5
- UniProtKB: A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942280   ⟸   XM_021086621
- Peptide Label: isoform X8
- UniProtKB: A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942289   ⟸   XM_021086630
- Peptide Label: isoform X16
- UniProtKB: A0A480H9V3 (UniProtKB/TrEMBL),   A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942277   ⟸   XM_021086618
- Peptide Label: isoform X6
- UniProtKB: A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942275   ⟸   XM_021086616
- Peptide Label: isoform X4
- UniProtKB: A0A8D1WX95 (UniProtKB/TrEMBL),   K7GRM8 (UniProtKB/TrEMBL),   A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942286   ⟸   XM_021086627
- Peptide Label: isoform X13
- UniProtKB: A0A480H7S2 (UniProtKB/TrEMBL),   A0A8D0P3I6 (UniProtKB/TrEMBL),   A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942273   ⟸   XM_021086614
- Peptide Label: isoform X2
- UniProtKB: A0A481AN58 (UniProtKB/TrEMBL),   A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942284   ⟸   XM_021086625
- Peptide Label: isoform X11
- UniProtKB: A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942278   ⟸   XM_021086619
- Peptide Label: isoform X7
- UniProtKB: A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942288   ⟸   XM_021086629
- Peptide Label: isoform X15
- UniProtKB: A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942274   ⟸   XM_021086615
- Peptide Label: isoform X3
- UniProtKB: A0A5G2QTZ4 (UniProtKB/TrEMBL),   A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942285   ⟸   XM_021086626
- Peptide Label: isoform X12
- UniProtKB: A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942272   ⟸   XM_021086613
- Peptide Label: isoform X1
- UniProtKB: A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942282   ⟸   XM_021086623
- Peptide Label: isoform X10
- UniProtKB: A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942293   ⟸   XM_021086634
- Peptide Label: isoform X20
- UniProtKB: A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942292   ⟸   XM_021086633
- Peptide Label: isoform X19
- UniProtKB: A0A8D0P926 (UniProtKB/TrEMBL),   A0A8D1P4H7 (UniProtKB/TrEMBL),   K9J6K7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942291   ⟸   XM_021086632
- Peptide Label: isoform X18
- UniProtKB: A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942281   ⟸   XM_021086622
- Peptide Label: isoform X9
- UniProtKB: A0A8D0WGT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942283   ⟸   XM_021086624
- Peptide Label: isoform X10
- UniProtKB: A0A8D1TR93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942290   ⟸   XM_021086631
- Peptide Label: isoform X17
- UniProtKB: A0A8D0WE83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020942287   ⟸   XM_021086628
- Peptide Label: isoform X14
- UniProtKB: A0A8D0WE83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000060904   ⟸   ENSSSCT00000073728
RefSeq Acc Id: ENSSSCP00000068318   ⟸   ENSSSCT00000069170
RefSeq Acc Id: ENSSSCP00000030556   ⟸   ENSSSCT00000035852
RefSeq Acc Id: ENSSSCP00000027472   ⟸   ENSSSCT00000024144
Protein Domains
CLEC16A/TT9 C-terminal   FPL


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000026569 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005024402 UniProtKB/TrEMBL
  ENSSSCG00015052990 UniProtKB/TrEMBL
  ENSSSCG00025046240 UniProtKB/TrEMBL
  ENSSSCG00030031943 UniProtKB/TrEMBL
  ENSSSCG00035050475 UniProtKB/TrEMBL
  ENSSSCG00040012740 UniProtKB/TrEMBL
  ENSSSCG00050076727 UniProtKB/TrEMBL
  ENSSSCG00055012714 UniProtKB/TrEMBL
  ENSSSCG00060074819 UniProtKB/TrEMBL
  ENSSSCG00065075673 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000024144.3 UniProtKB/TrEMBL
  ENSSSCT00000035852 ENTREZGENE
  ENSSSCT00000035852.4 UniProtKB/TrEMBL
  ENSSSCT00000069170 ENTREZGENE
  ENSSSCT00000069170.2 UniProtKB/TrEMBL
  ENSSSCT00005038723.1 UniProtKB/TrEMBL
  ENSSSCT00005038812.1 UniProtKB/TrEMBL
  ENSSSCT00005038996.1 UniProtKB/TrEMBL
  ENSSSCT00005039142.1 UniProtKB/TrEMBL
  ENSSSCT00015070537.1 UniProtKB/TrEMBL
  ENSSSCT00015070600.1 UniProtKB/TrEMBL
  ENSSSCT00015070710.1 UniProtKB/TrEMBL
  ENSSSCT00015070912.1 UniProtKB/TrEMBL
  ENSSSCT00015071100.1 UniProtKB/TrEMBL
  ENSSSCT00015071242.1 UniProtKB/TrEMBL
  ENSSSCT00025062802.1 UniProtKB/TrEMBL
  ENSSSCT00025063116.1 UniProtKB/TrEMBL
  ENSSSCT00025063441.1 UniProtKB/TrEMBL
  ENSSSCT00030044200.1 UniProtKB/TrEMBL
  ENSSSCT00030044237.1 UniProtKB/TrEMBL
  ENSSSCT00030044282.1 UniProtKB/TrEMBL
  ENSSSCT00030044335.1 UniProtKB/TrEMBL
  ENSSSCT00035067273.1 UniProtKB/TrEMBL
  ENSSSCT00035067275.1 UniProtKB/TrEMBL
  ENSSSCT00035067281.1 UniProtKB/TrEMBL
  ENSSSCT00040016879.1 UniProtKB/TrEMBL
  ENSSSCT00040016922.1 UniProtKB/TrEMBL
  ENSSSCT00040016953.1 UniProtKB/TrEMBL
  ENSSSCT00040017023.1 UniProtKB/TrEMBL
  ENSSSCT00040017066.1 UniProtKB/TrEMBL
  ENSSSCT00050105459.1 UniProtKB/TrEMBL
  ENSSSCT00050105463.1 UniProtKB/TrEMBL
  ENSSSCT00055025021.1 UniProtKB/TrEMBL
  ENSSSCT00055025263.1 UniProtKB/TrEMBL
  ENSSSCT00055025356.1 UniProtKB/TrEMBL
  ENSSSCT00060102386.1 UniProtKB/TrEMBL
  ENSSSCT00060102433.1 UniProtKB/TrEMBL
  ENSSSCT00060102470.1 UniProtKB/TrEMBL
  ENSSSCT00060102513.1 UniProtKB/TrEMBL
  ENSSSCT00060102577.1 UniProtKB/TrEMBL
  ENSSSCT00065104465.1 UniProtKB/TrEMBL
  ENSSSCT00065104471.1 UniProtKB/TrEMBL
  ENSSSCT00065104474.1 UniProtKB/TrEMBL
  ENSSSCT00065104487.1 UniProtKB/TrEMBL
InterPro CLEC16A/TT9 UniProtKB/TrEMBL
  CLEC16A/TT9_N UniProtKB/TrEMBL
  CLEC16A_C UniProtKB/TrEMBL
NCBI Gene CLEC16A ENTREZGENE
PANTHER PROTEIN CLEC16A UniProtKB/TrEMBL
  PTHR21481 UniProtKB/TrEMBL
Pfam CLEC16A_C UniProtKB/TrEMBL
  FPL UniProtKB/TrEMBL
UniProt A0A480H7S2 ENTREZGENE, UniProtKB/TrEMBL
  A0A480H9V3 ENTREZGENE, UniProtKB/TrEMBL
  A0A481AN58 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QTZ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JEJ4_PIG UniProtKB/TrEMBL
  A0A8D0JID8_PIG UniProtKB/TrEMBL
  A0A8D0LPI2_PIG UniProtKB/TrEMBL
  A0A8D0LPM8_PIG UniProtKB/TrEMBL
  A0A8D0P3I6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0P5I1_PIG UniProtKB/TrEMBL
  A0A8D0P926 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0WD13_PIG UniProtKB/TrEMBL
  A0A8D0WE83 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0WGT7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1A9Z0_PIG UniProtKB/TrEMBL
  A0A8D1DHF2_PIG UniProtKB/TrEMBL
  A0A8D1P4H7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1QF09_PIG UniProtKB/TrEMBL
  A0A8D1QIL5_PIG UniProtKB/TrEMBL
  A0A8D1TR93 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1WX95 ENTREZGENE, UniProtKB/TrEMBL
  I3LTM5_PIG UniProtKB/TrEMBL
  K7GRM8 ENTREZGENE, UniProtKB/TrEMBL
  K9J6K7 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:86748 ENTREZGENE