SMTN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 47,879,317 - 47,902,698 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 47,879,317 - 47,902,700 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 50,990,987 - 51,014,394 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SMTN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 22 | 31,064,118 - 31,104,624 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 22 | 31,064,105 - 31,104,757 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 22 | 31,460,104 - 31,500,610 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 22 | 29,807,305 - 29,830,609 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 22 | 29,801,858 - 29,825,163 | NCBI | | | | | Celera | 22 | 15,277,437 - 15,300,741 (+) | NCBI | | Celera | | | Cytogenetic Map | 22 | q12.2 | NCBI | | | | | HuRef | 22 | 14,439,094 - 14,462,417 (+) | NCBI | | HuRef | | | CHM1_1 | 22 | 31,437,118 - 31,460,447 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 22 | 31,527,653 - 31,568,123 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Smtn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 11 | 3,467,522 - 3,489,337 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 3,467,521 - 3,490,612 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 3,517,522 - 3,539,292 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 3,517,523 - 3,540,612 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 3,417,525 - 3,439,295 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 3,417,526 - 3,439,242 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 4,008,414 - 4,030,184 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | A1 | NCBI | | | | | cM Map | 11 | 2.47 | NCBI | | | | |
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Smtn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 82,622,223 - 82,644,525 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 78,398,595 - 78,420,908 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 78,397,778 - 78,420,886 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 82,839,785 - 82,862,070 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 84,079,891 - 84,102,176 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 80,525,655 - 80,547,941 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 83,755,141 - 83,776,871 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 83,755,142 - 83,776,863 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 84,443,088 - 84,464,813 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 14 | 80,301,566 - 80,303,230 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 84,160,580 - 84,182,869 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 84,179,725 - 84,202,043 (-) | NCBI | | | | | Celera | 14 | 77,311,041 - 77,333,331 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q21 | NCBI | | | | |
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Smtn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955455 | 5,273,602 - 5,297,604 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955455 | 5,271,615 - 5,294,151 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SMTN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 23 | 41,036,635 - 41,060,211 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 22 | 43,735,328 - 43,758,712 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 22 | 12,105,016 - 12,128,365 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 22 | 29,942,889 - 29,966,256 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 22 | 29,942,895 - 29,966,256 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SMTN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 26 | 24,085,356 - 24,108,005 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 24,085,382 - 24,108,540 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 23,955,752 - 23,978,245 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 26 | 24,468,412 - 24,490,906 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 26 | 24,468,434 - 24,490,906 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 26 | 24,171,777 - 24,194,301 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 26 | 24,433,828 - 24,456,302 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 26 | 24,495,094 - 24,517,587 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Smtn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SMTN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 19 | 13,972,812 - 13,996,124 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 19 | 13,974,686 - 13,999,061 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 112,123,501 - 112,146,815 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Smtn (Heterocephalus glaber - naked mole-rat) |
|