ECHDC1 (ethylmalonyl-CoA decarboxylase 1)

Gene: ECHDC1 (ethylmalonyl-CoA decarboxylase 1) Sus scrofa

Analyze

Symbol:

ECHDC1

Name:

ethylmalonyl-CoA decarboxylase 1

RGD ID:

14042349

Description:

ENCODES a protein that exhibits carboxy-lyase activity (inferred); catalytic activity (inferred); INVOLVED IN fatty acid beta-oxidation (inferred); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); short chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

enoyl CoA hydratase domain containing 1; ethylmalonyl-CoA decarboxylase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	35,853,125 - 35,909,956 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	35,852,939 - 35,909,314 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	39,547,637 - 39,593,564 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chemical and Drug Induced Liver Injury (ISO)

melanoma (ISO)

short chain acyl-CoA dehydrogenase deficiency (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fatty acid beta-oxidation (IBA,IEA)

Cellular Component

cytosol (IBA,IEA)

Molecular Function

carboxy-lyase activity (IEA)

catalytic activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ECHDC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	35,853,125 - 35,909,956 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	35,852,939 - 35,909,314 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	39,547,637 - 39,593,564 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ECHDC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	127,288,712 - 127,343,609 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	127,288,712 - 127,343,609 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	127,609,857 - 127,664,754 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	127,651,550 - 127,706,447 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	127,651,551 - 127,706,418	NCBI
Celera	6	128,352,141 - 128,407,019 (-)	NCBI		Celera
Cytogenetic Map	6	q22.33	NCBI
HuRef	6	125,186,499 - 125,241,392 (-)	NCBI		HuRef
CHM1_1	6	127,874,192 - 127,929,073 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	128,477,670 - 128,532,553 (-)	NCBI		T2T-CHM13v2.0

Echdc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	29,174,140 - 29,222,657 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	29,189,162 - 29,223,465 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	29,298,144 - 29,346,661 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	29,313,166 - 29,347,469 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	29,032,972 - 29,066,467 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	29,003,022 - 29,036,079 (+)	NCBI		MGSCv36	mm8
Celera	10	30,245,328 - 30,279,070 (+)	NCBI		Celera
Cytogenetic Map	10	A4	NCBI
cM Map	10	16.59	NCBI

Echdc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	30,304,968 - 30,355,957 (-)	NCBI		GRCr8
mRatBN7.2	1	28,476,354 - 28,507,173 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	28,476,200 - 28,507,319 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	28,271,698 - 28,302,041 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	34,271,549 - 34,301,894 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	28,472,314 - 28,502,659 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	30,874,410 - 30,921,117 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	30,874,418 - 30,917,882 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	32,308,385 - 32,350,666 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	29,266,332 - 29,296,530 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	29,269,279 - 29,299,475 (-)	NCBI
Celera	1	27,143,903 - 27,173,992 (-)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

Echdc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	8,332,066 - 8,365,200 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	8,332,066 - 8,365,200 (-)	NCBI	ChiLan1.0	ChiLan1.0

ECHDC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	147,285,146 - 147,339,869 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	145,193,942 - 145,248,628 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	125,079,246 - 125,134,053 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	129,192,752 - 129,247,667 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	129,192,752 - 129,247,667 (-)	Ensembl	panpan1.1		panPan2

ECHDC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	66,012,245 - 66,073,008 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	66,012,782 - 66,073,000 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	66,818,115 - 66,864,967 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	66,215,324 - 66,276,554 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	66,215,324 - 66,262,684 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	66,145,403 - 66,192,241 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	65,930,003 - 65,976,806 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	66,572,343 - 66,619,231 (-)	NCBI		UU_Cfam_GSD_1.0

Echdc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	116,025,205 - 116,067,417 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936639	2,351,372 - 2,397,027 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936639	2,351,777 - 2,394,539 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ECHDC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	46,386,543 - 46,440,730 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	46,398,058 - 46,439,533 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	18,663,074 - 18,718,637 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Echdc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	1,708,153 - 1,740,824 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	1,707,116 - 1,750,708 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ECHDC1
1487 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	10	4	3	5	2	23	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003121214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005652682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013988459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021088555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021088558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK398972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY610124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01057823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000004659 ⟹ ENSSSCP00000004552

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	35,863,381 - 35,908,872 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000057506 ⟹ ENSSSCP00000036988

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	35,853,125 - 35,909,956 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000067352 ⟹ ENSSSCP00000067468

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	35,852,934 - 35,907,987 (+)	Ensembl

RefSeq Acc Id:

XM_003121214 ⟹ XP_003121262

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	35,863,265 - 35,909,314 (+)	NCBI

Sequence:

show sequence

GAAATATGTTGACGCAGGAGCCTGGTGATAAAACAGCCAATCCTTTCTTGATACTTTATTGGTC
TGACCTGAAAGCTGAGCAGATATAAATGGGTTGGAGCACAGGCAGCTATCACCATTCCAAGAAG
AACGACCAGCTGGCAAAGACGAAAGGAATTGAGACAGAAAATGGCAAGTCTTTTAACGACTTCA
CCTGTTCCTATAAGGACAAAATTTCTACATCAAATAGGATTGTCACTTTATAATACCTCTCATG
GCTTCCATGAGGAAGAAGTGAAAAAAAAACTTCAGCAGTTTCCTGGTGGATCTGTTGACCTCCA
GAAAGAAGAAAATGGCCTTGGCATTCTTACTCTGAACAATCCAAGTAAAATGAATGCCTTCTCA
GGTGTTATGATGCTGCAGCTTCTGGAAAAAGTGATTGAGTTGGAAAATTGGACAGAGGGGAAAG
GTGTCATTGTCTGTGGGGCAAAAAATACTTTCTCCTCAGGATCTGATCTGAATGCTGTGAAAGC
ACTAGGAACTCCAGAGGATGGAATGGCTGTATGCATGTTCATGCAAAACACCTTAACAAGATTT
ATGAGACTTCCTTTAATAAGTGTTGCACTGGTTCAAGGTCGGGCACTGGGTGGAGGAGCAGAAT
TTACTACAGCATGTGATTTCAGATTAATGACTACCGAGAGTGAAATCAGATTTGTCCACAGGGA
GATGGGCATAATACCAAGCTGGGGCGGTGCTGCACGACTGGTTGAAATAATCGGCAGTAGACAA
GCTCTTAAAGTGTTAAGCGGGGCCCTCAGACTTGATTCAGAAAAAGCTTTACACATAGGAATTG
CTGACGAGGTCTTGCAATCTTCAGATGAAACTGAGTGTCTCAGAGAGGCACGAGAGTGGCTACA
GCAGTTTATCAAAGGGCCACCAGAAGTAATTAGAGCTCTGAAAAAATCCATTTCTTCAGGCAGA
GAGCTTTGTTTAGAGGAGGCATTGCAGATGGAAAGAGATCTTTTAGGTACAGTTTGGGGTGGAC
CTGCCAATTTAGAGGCTGTTGCTAGGAGAGGAAAGTTTAAGAAATAGTTTAAAAAAAAAATGTA
CTCTAAGTAAAACTCCAATGATTAATACGTATAGAAGTTAACATTAAATGTGAATGTCACAACT
ACTTTGAAGGCTACTATTAGTATTTGGGTTTGTTTTTAACAACTGTATTAATGTCTGAGCTCAC
TGGCCTAATTTTCAGTATATTTGGGCACTTACCAAGTAATGTGAAACATCTAGCTAAACTATAA
AACACTTTTGGCTTAAAAATGATCAATTCCCAAATTCCCGTAATAGTTCTTAAGCTATAACCAA
AGACCAGTTTTTAAAAGGAAAAACTACACAAAACTTATTCCTGGTGTTATTTTTAATAAAGTCT
TTGTCTTGTCTTACCTGGAAATACTTTACAAAAATAACTTCATGACACTTAGAAAACAAAAGTG
GAGATGGTTCAGGGGATAAGCAAGTATGCAAAGATCTGATCTTCTGCTCTAAGCAGCTGGAGTA
GAAAAGTCATGGGGGATTCTCTTGTGGCATGGCAGTGAAAGACCCAGTGTTGTCCCTGGAGTAG
CTTAGGCTGCTGCTGTGGTGGTTTGATCCTTGGCCTAGAGAACTTCCACATGCTGCAGCTGTGG
CCACACACACACACACACACACACAAAATTCATGGAGGATGGCCCTTCTTTTAAATAATTACTA
GATTTCTATTTAAAATTATCTACTAAACAATGAACTTTCCTCCATGTGGAAAGTCTCCAAAATT
AACCAGTCCATTTGTTTGCTCCATAATTTCCAAACTAGTAATGTACTATAATTCATGTAGTAAT
TCAGTTTAACTTTACATAAAAACTGCCTAAGACTTCAGAGATTCATGAAGCATCCTGTAACATA
CATTTGCATTTTACACCAAATTTCTATTTTTTTTTCTGAAGAGTAGCTAGCCTTCTTTTATAAC
TAGCTGTCTTTTAAAAGTAAATTTAATAAAAATGCACAGGAATTCCTGTTGTGGCGCAGTGGAA
ACAAATCTGACTAGGAACCATGAGGTTGCGGGTTCCATCCTTGGCCTCGCTCAGTGGGTTAAAG
TTCTGGCGTTGCCATGAGCTGTGGTGTAGGTTGCAGACAGGGCTCAGATCTGGTGTTGGTGTGG
CTCTGGCGTAGGCTGGGCAGCTATGGCTCCGACTGGACCCCTAGCCTGGGAATCTCCATATGCC
GTGGTAGCAGCCCTAAAGAGACAAAAATAAATAAATAAAAATGTACAACTCAAACTTTTATGGA
TCTCTATAATTCAGACTTTAAAAAGCATAAGTCAAAAAAGTAAGTTGTAATGCTAACCTATCAC
AAGAGGTAAAATATAACTTTTAAGTAGTGACAGTTTATATGTTGTTATAACAATTTGAAAATCA
TATTAAAAATAACCTGCATATGCTTCATCAA

hide sequence

RefSeq Acc Id:

XM_005652682 ⟹ XP_005652739

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	35,863,322 - 35,909,314 (+)	NCBI

Sequence:

show sequence

ATTGGTCTGACCTGAAAGCTGAGCAGATATAAATGGGTTGGAGCACAGGCAGCTATCACCATTC
CAAGAAGAACGACCAGCTGGCAAAGACGAAAGGAATTGAGACAGAAAATGGCAAGTCTTTTAAC
GACTTCACCTGTTCCTATAAGGACAAAATTTCTACATCAAATAGGATTGTCACTTTATAATACC
TCTCATGGCTTCCATGAGGAAGAAGTGAAAAAAAAACTTCAGCAGTTTCCTGGTGGATCTGTTG
ACCTCCAGAAAGAAGAAAATGGCCTTGGCATTCTTACTCTGAACAATCCAAGTAAAATGAATGC
CTTCTCAGGTGTTATGATGCTGCAGCTTCTGGAAAAAGTGATTGAGTTGGAAAATTGGACAGAG
GGGAAAGGTGTCATTGTCTGTGGGGCAAAAAATACTTTCTCCTCAGGATCTGATCTGAATGCTG
TGAAAGCACTAGGAACTCCAGAGACTTCCTTTAATAAGTGTTGCACTGGTTCAAGGTCGGGCAC
TGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTCAGATTAATGACTACCGAGAGTGAAAT
CAGATTTGTCCACAGGGAGATGGGCATAATACCAAGCTGGGGCGGTGCTGCACGACTGGTTGAA
ATAATCGGCAGTAGACAAGCTCTTAAAGTGTTAAGCGGGGCCCTCAGACTTGATTCAGAAAAAG
CTTTACACATAGGAATTGCTGACGAGGTCTTGCAATCTTCAGATGAAACTGAGTGTCTCAGAGA
GGCACGAGAGTGGCTACAGCAGTTTATCAAAGGGCCACCAGAAGTAATTAGAGCTCTGAAAAAA
TCCATTTCTTCAGGCAGAGAGCTTTGTTTAGAGGAGGCATTGCAGATGGAAAGAGATCTTTTAG
GTACAGTTTGGGGTGGACCTGCCAATTTAGAGGCTGTTGCTAGGAGAGGAAAGTTTAAGAAATA
GTTTAAAAAAAAAATGTACTCTAAGTAAAACTCCAATGATTAATACGTATAGAAGTTAACATTA
AATGTGAATGTCACAACTACTTTGAAGGCTACTATTAGTATTTGGGTTTGTTTTTAACAACTGT
ATTAATGTCTGAGCTCACTGGCCTAATTTTCAGTATATTTGGGCACTTACCAAGTAATGTGAAA
CATCTAGCTAAACTATAAAACACTTTTGGCTTAAAAATGATCAATTCCCAAATTCCCGTAATAG
TTCTTAAGCTATAACCAAAGACCAGTTTTTAAAAGGAAAAACTACACAAAACTTATTCCTGGTG
TTATTTTTAATAAAGTCTTTGTCTTGTCTTACCTGGAAATACTTTACAAAAATAACTTCATGAC
ACTTAGAAAACAAAAGTGGAGATGGTTCAGGGGATAAGCAAGTATGCAAAGATCTGATCTTCTG
CTCTAAGCAGCTGGAGTAGAAAAGTCATGGGGGATTCTCTTGTGGCATGGCAGTGAAAGACCCA
GTGTTGTCCCTGGAGTAGCTTAGGCTGCTGCTGTGGTGGTTTGATCCTTGGCCTAGAGAACTTC
CACATGCTGCAGCTGTGGCCACACACACACACACACACACACAAAATTCATGGAGGATGGCCCT
TCTTTTAAATAATTACTAGATTTCTATTTAAAATTATCTACTAAACAATGAACTTTCCTCCATG
TGGAAAGTCTCCAAAATTAACCAGTCCATTTGTTTGCTCCATAATTTCCAAACTAGTAATGTAC
TATAATTCATGTAGTAATTCAGTTTAACTTTACATAAAAACTGCCTAAGACTTCAGAGATTCAT
GAAGCATCCTGTAACATACATTTGCATTTTACACCAAATTTCTATTTTTTTTTCTGAAGAGTAG
CTAGCCTTCTTTTATAACTAGCTGTCTTTTAAAAGTAAATTTAATAAAAATGCACAGGAATTCC
TGTTGTGGCGCAGTGGAAACAAATCTGACTAGGAACCATGAGGTTGCGGGTTCCATCCTTGGCC
TCGCTCAGTGGGTTAAAGTTCTGGCGTTGCCATGAGCTGTGGTGTAGGTTGCAGACAGGGCTCA
GATCTGGTGTTGGTGTGGCTCTGGCGTAGGCTGGGCAGCTATGGCTCCGACTGGACCCCTAGCC
TGGGAATCTCCATATGCCGTGGTAGCAGCCCTAAAGAGACAAAAATAAATAAATAAAAATGTAC
AACTCAAACTTTTATGGATCTCTATAATTCAGACTTTAAAAAGCATAAGTCAAAAAAGTAAGTT
GTAATGCTAACCTATCACAAGAGGTAAAATATAACTTTTAAGTAGTGACAGTTTATATGTTGTT
ATAACAATTTGAAAATCATATTAAAAATAACCTGCATATGCTTCATCAA

hide sequence

RefSeq Acc Id:

XM_013988459 ⟹ XP_013843913

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	35,863,260 - 35,905,408 (+)	NCBI

Sequence:

show sequence

ATTGTGAAATATGTTGACGCAGGAGCCTGGTGATAAAACAGCCAATCCTTTCTTGATACTTTAT
TGGTCTGACCTGAAAGCTGAGCAGATATAAATGGGTTGGAGCACAGGCAGCTATCACCATTCCA
AGAAGAACGACCAGCTGGCAAAGACGAAAGGAATTGAGACAGAAAATGGCAAGTCTTTTAACGA
CTTCACCTGTTCCTATAAGGACAAAATTTCTACATCAAATAGGATTGTCACTTTATAATACCTC
TCATGGCTTCCATGAGGAAGAAGTGAAAAAAAAACTTCAGCAGTTTCCTGGTGGATCTGTTGAC
CTCCAGAAAGAAGAAAATGGCCTTGGCATTCTTACTCTGAACAATCCAAGTAAAATGAATGCCT
TCTCAGGTGTTATGATGCTGCAGCTTCTGGAAAAAGTGATTGAGTTGGAAAATTGGACAGAGGG
GAAAGGTGTCATTGTCTGTGGGGCAAAAAATACTTTCTCCTCAGGATCTGATCTGAATGCTGTG
AAAGCACTAGGAACTCCAGAGACTTCCTTTAATAAGTGTTGCACTGGTTCAAGGTCGGGCACTG
GGTGGAGGAGCAGAATTTACTACAGCATGTGATTTCAGGCCACACTTGCACATGAACGTTCCGG
AGCCTCGGATTGAATCTGAGCCACAGCTGCAGCAATGCCAGATCCTTAACCCACTGTGACAGGC
TGGGGATCAAACCCACACTGCCTCAGAGACAACCCCAGATCCTTAACCTGCTGCACCACAGCAG
GAACGCCAACATTTTGCTATTTTGTTTTTGTTTTTGGCTTGTCATGTGTGTGTTTGTTTGTGTG
TGTAATATATAATAATATTTTTTTCTGAGAAATTCGAGAGTAGGTTGCATATATCTTATTACCT
TTTTATTCCTTTAAATACACTCACAAATATATATATTCTTTTTTAATAACCAGAGTACTCTACA
CAACCACAGCACAGCTGTCAAATGCAGGAAATTTAACATTGATGTCATTCTTTTATCTGTATAT
TACCCATATTTTAATTGTGTCAGTTTGGCAATAATGTCCATTATAGTAGTGTTTTCCTCCACCG
CAGGATCATTGCACTTAGTTGTCAGAGCTCTTTACATTCAGAACTGAGATAATGTTTTTTAAGC
TATTAAGTTTGTATTATAACATCAATAGTAAATAATACAGGTGATGTTATTTTAAAAATATATA
TTGTGATTTCTGATTTTAAGAGGATATGTGCTCATTTGGGTGAATATGAATCACCTGGGGATTT
TATTAAATTGCAGTTCTTATTTTATAGGTCTGGGGTGAAGCCTGAGATGATGCTATATAGCTGG
TCCACAGACCACACATTGAAAAACAAGGTTCTAGATTATTTTGAAAATATTTATTTTAAAAAAT
ATTTTAAGTATTATAAAAATAAAGCATGCCTTACTATTATTAATCATTAAAAAATATACAGGTA
GGTATAGAGTAAAAATTAAAGTTGTTATCATCCAAACGTAATTAGCATTAGCATTATGGTGTGC
TTTCTTCACTTTTTAAAAATAGACACATAAGAGTTCTGGTGGTGGCTTAGCCGTTAACAAATCT
GACTAGCATGCATGAGGACACAGGTTCGATCCCTGGCCTCGCTCAGTGGGTTAAGGATCCAGTG
TTGCCGTGAGCTGTGGTGTAGGTTGCAAGATCTGACTCGAATCCTGCGTTGCTATGGCTGTGGT
GTAGGCTGGCAGCTAGCTACAGCTTGGATTCAACCCCTAGCCTGGGAAGTTCCATGTGCCACAG
ATGTGGCCCTAAAAAAAGGAAAAAAAAAAAAGAAAGAAAAGACGTATAATTTTCTATTTTTAAA
AAAGTAGGATCATGTGACATAGTTTATATTTAATGAGTGTTTTCATATTATTAAATGTACTTGG
AAAACATGAATTTTATAAGTTAAAATATTTCATCAGTATGGATATACTAAAATATCCTCCTTTG
GTTGTTTCTAATTTTTCTCTGATTAATGCTCTGATAACTGCTTTTTACATAAGGCTTTGTTTTT
TTTTGGATTTTTTCCTTAGAATAAATCCTACTACTTATTAAGTAGTCAAAGGATTTAGTCAAAG
ATGGTGAAAATGTTCAAGGTTTTTGATATATGGTACCAAGTTATCCTCCAGGAAAGATTCTGCC
AATTTATATTACCACCAGCAGTATATCAGTATCTTTTTGAGAGCATCCTTTCTTACTCTTTTAA
AAGATCTTTTCGAATTTTAATAATCAAAAATTGTTTAATTTGTATTTTTAAAAGTTTAGAAGTG
TATGGAGAGGCATATGTTTTTATATGTTCATTGAATGCGTGTGTATGTGTGAACTGTCTGTCCT
TTTTGTTTTTCTTTGGAGTATCAAGGATTTAGCTGTTTATACACTGGATGAAAAACACATTTTT
ATTCCTCTGTCTCCCTAGAGAAATAAAATTCTCAATTATGCAATTTAAAACCTGCCTACCTAAT
TTGTTTTCAGTCTCTAACATTGTTTTCATGAGTATAAATAACCCTCAGCCAAAGGTATTAGCAT
TTCCAGATGCTACCCATTCGTTCAAAGTGTATTACAAAGAAAGGGAGCTGTAAACATATTTGTC
CCAAGGGAGCTACTATAGGTTTCCCTTCTCTTAAAATACCAACTTAATAAATAAAATACAAAAT
ATACGTAATACACACTTGCACATAGACACAGGTACACATGCATGTGCACACACACACAAATCAA
CATATCTCAGAGTTACTAAAAAACAAATTCCATTTTTGCTGTGGCAGTGCCTGTACTCTGAATA
TGAGATATCCACCTCAGGAAGCATTCACATTGCCCATGCATGTTGCTTTTGTTTAGTAGTTATC
ACTGTGTGATGTGGAAATTCTTACTTTAGAGCCTGTGATATCAAGAAAATCCACCTCTGAGCAT
ACTAAGATTATTAACTGAATATTAAAATCAGACTTGATATTCTCAAAAGATTTTCCTGTCTGAC
TCTCCCTCACTGTACTACCATAGGAAATCAGAAAGGTGACCCATGGGTAGAAACTTTGGCTCTT
GCAATTTTTTATAATTTGTCTTGTGATGTGATGGCAGATAGAAATCTGGAGGAAGAAGGTACCA
GGAAAGTACATGTGCAAATAAATGTCTGTGTTCAAGGCATGATTTTATTATTTATTTATTTATT
TAGCTTTTTAGGGCCACGCCTGTGGCATATGTAGGTTCCCAGGCTAGGGGTTGAATCGGAGCTA
CTCCACAGCCACAGCAATGCGGGATCTGAGCCGCGTCTTCAACCTACACCACAGCTCAGGGCAA
CACCAGATCCTTAACCCACTGATCAAGGCCAGGGATCGAACCCACAATGTCATGGTTCCTAGTC
GGATTCATTTCCACTGCGCCACGACAGGAACTCCAAGGCATGATTTTAAAGTATTGTTTGTGGT
CAGAGATGCTGTTGCTATTATAGAATTTTATGTACCATATTTCCTCATGTCACCACAGTTTGCC
TTGTTACATTTGCTTTGTTCTTATACCATGTAAAGGAACCAGCAGTGCCTGATCCTGAAGTTTA
TTTAAATCAATGATTCTAGACTTTAAATTTACGTATCATGTTATTTAATTTTGTAACAGGAATG
CTTTAAAATTTTAAAATATTTATGCTTTTAGTTATATTGCACTATATTCCTTGAGTTAGTCTTA
GAGAAGTATGTGGGTTTTTTTAATCAACTTGGAATCTTCTGCTTCAGCCAGAACTATAACAGAA
CACAGTATTATTCCTACCTTTATTTGGAAATTAAAAATTGTGTATTATTTTGTAGTCTTCATTA
ACAGATATTAAGGAAGGATGGTATACCATTACTTGCTGGGCTTTCACTGAAAATATAGCTCTTT
ATACATTCAAACTTTAGGGACTGAGTGAGCTTATTAGTCCAGGAAATAACTTTATAATGTCTTT
CTAGCAGAAGCACTACTGTTGTTTGTAGTGAGTTACCTATTAATGCAGCCAACCTGATAATAAT
AAAATCTAGTACACATAAGAGTTTAATATGTCAGGTACTGTGAGACTACAAATACATACAATGT
ATATATTCCAAATTAAGGTATACATACTGTGTTCTATAGATGTGGCTGAAGTAGAAGATTTCAA
ACTATTTTATTAAAAACATACATAAACACGATTCCTCTAGGATTCTATTTAAAGGAACAGTGGT
GTGTATATATATGTTCTAAGAAAACTTTCATATATTAACTCATTTAATACTCATAATTCTATGG
CATAAGTACTATCATTACATCTGCTTTATAAACAAGCATACTGAGGCCCAGAGATGTTAAGTCA
TCTACTCTTCCTCTCCTCTTTATACCATGTATCTCTTTTTTTGTGTGTTTTACAAGGTGTAAAA
TGAAGCCAGTCTAGTGACCAAGCCAGACAGTCTAGTTTATATCCATGCATTTCACATCAAAGCT
GTACTCTCTTCCAATGTAATTATTTATGTTTCTAACTTCACCAGAGTTCACTAAAAGTATCCTT
TCTTTTATGATACACATTTTTAAAATCTTTTTGTAATCTTTTGCCAAAATGTTGCCTATTTTAG
TAAAATTTGTAATAATTTTAAAGTTATTTTTCTTGAATACATTTGTTCAAAGTCCTACAACTTA
TAGCTAAATCTGATGACTTAGCTAGTAGTCGCATCGTGAACCATCCCTTCAGGTATCAACATTG
ACTTTGCAACATCTCACAAAGGTGATACTCTCTCCTAAGTTATGAATTGTTTTTCCTATAACAC
TGATGCATCCATAACGGAACACTGCGTATATCCACATTTGATTAATTTCCTTTTCTTTGCTCTC
CTAAAGTGTCACAGGAAATTTTCAACCTTGCGAATAATGACACTTATTAATAGTCATAAGACCC
TTATAATTCTTTTACTTGTCAAAATAACAGTTTAATATGGCTGTATAAATGAGTCTGCCATAAG
GCTTCAGAGTCTTAAGATTTGGGTCTTCTAGTTTTCTACATAGACTAATAGATTATCCCTTGCA
ATAAACTACATTTCAGGTGGTGCCAGGTAAAGGCATCTAAATTCTAGCAGTAATTAGTGTATAA
TTCTAAAATGGGAGTTCCTGTCGTGGCACAGTGGAAACGAATCCGACTGGGAACCATGAGGTTG
TGGGTTCGATCCCTGGCCTTGCTCACTGGGTTAAGGATCCTGTGTTGCCCTGAGCTGTGTGGTA
GGTCACAGACATGACTCAGATCTGGTGTTGCTGTGGCTGTGACATAGGCCAGCAGCTGTAGCTC
CAACTGGACCCTTAACCTGGGAACTTTCATATGCCATGGGTACAGCCCTAAAAAGCAAAAATAA
ATAAATAAATAAAAATAAAAAGACAAAGGACAAAAAAATTATCTAAAAGGCCTATCAGGAAGCA
GTTTCTATTTTTGGATATATCTTGATACAACATTTTCTTCATACATTCTCGTTATCACCACTGA
AAATTTTACATTTAAACTTTAACTTTTAGATTAATAAAAAGTCTTGTGAAAGGTTACCACGTGA
ACAGTGCATAGTTCTCCCATTGTTAGACTAAACTGCCTTGTGTTTTTTGGTCACTTAATACATT
TTTTGGTTATATTAGTTTATGTGTATCAGTACACAGGTACACCCTAGGCATAACATATAAAGAA
TGAATGTCAGTTTGATCACAACAGGTATTTTTACAAAGATTACCTCAGGATTTGTTAGGGTTAT
AAAATATGATTCATAAAGTCATACCTCACCTTGTAAAATATGGCAAAAGGAAAAAAACACATAA
AAATGATAAGCATTCTTTAGAAGAAAATAATTGCAAATATAAAAAGGCTTATATATTCAACTTT
TGTCATAAGCTAATCTACATTATCCCACCATCAAGACTTTACCAAACGTATTCAGTTGACTTTA
AATGAATTTATCCTGACATAATCCTTTTCTATATTGTAGGCACAGCTCTGAGCGATCAGTGTCA
ATTCCAGGATATAAATAGGAACTGTGACATCTATTCTGTGTGAAGTTTTATAGGGTTGTGTTCA
GTACAACAATACTCATATTTCCAACTCTATTAAGACATTACTGTGATTTCTATTCTACTTATTT
TCGACCTTGTTTTTTGTTTATTATAACTCCTTTCACAATTTGGGGCTAGATTCAGATTCTTAAG
ACACTCATTCTTTCTCCCCTCCCATTTAAAAAGTATTTATTGAAAAATACTATTTCATGGTTAT
CTAAAAGCAAATGTCCATAATTAAGGCAGATTTTTCCTTATAGGAATTCACAGCTGTGAAGAGA
AAATTCTCTTTCCCAGTGGGTTAATAAATAGGCTTTTGTGAGAATTCTCTACTGGAATATTTCT
CTTGATTAAAGGGTCAAAGACTCAGAGTCTGCTGTTTTTGGTGATTAAAAAAAAAAAAAAAAAA
AAAAA

hide sequence

RefSeq Acc Id:

XM_021088555 ⟹ XP_020944214

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	35,852,939 - 35,909,314 (+)	NCBI

Sequence:

show sequence

TGGGTCTGGGGGGTGCCAGGCCGGGAGCGCAAGAGGGTCCCCAGGGAGAAAAAGCAGAAGCGAG
GAAGGAAAGAGGACGCGGAGAAGCTAAGGGACCTGGGGCGGCAGGGGCGGGGAAGCGAGAAGGA
TTTTAGCGGAAGTGGAAATGGGGGCAGCTGAGGGGATGGGGGGGTGCGACCGAGCGGAAGGGGA
AGTTGGCGCCACTGGGTCCTCCAGGACTCTGTGTCGGTGAAGACTGAGTAGCAGATATTTTCTA
GGAAAGAACCACTTTATAGCTCTTCTCCACACGAATTGCAAACAGCCGCCAGCGCAAAGCCGCC
ACGCAAGCTCACTGCCGTCAATACTTCCGGGCGCCAGGACGCGGTACTGAGGGACGCGAAGGCC
TTTGCCAGAAATGGCAAGTCTTTTAACGACTTCACCTGTTCCTATAAGGACAAAATTTCTACAT
CAAATAGGATTGTCACTTTATAATACCTCTCATGGCTTCCATGAGGAAGAAGTGAAAAAAAAAC
TTCAGCAGTTTCCTGGTGGATCTGTTGACCTCCAGAAAGAAGAAAATGGCCTTGGCATTCTTAC
TCTGAACAATCCAAGTAAAATGAATGCCTTCTCAGGTGTTATGATGCTGCAGCTTCTGGAAAAA
GTGATTGAGTTGGAAAATTGGACAGAGGGGAAAGGTGTCATTGTCTGTGGGGCAAAAAATACTT
TCTCCTCAGGATCTGATCTGAATGCTGTGAAAGCACTAGGAACTCCAGAGGATGGAATGGCTGT
ATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACTTCCTTTAATAAGTGTTGCACTG
GTTCAAGGTCGGGCACTGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTCAGATTAATGA
CTACCGAGAGTGAAATCAGATTTGTCCACAGGGAGATGGGCATAATACCAAGCTGGGGCGGTGC
TGCACGACTGGTTGAAATAATCGGCAGTAGACAAGCTCTTAAAGTGTTAAGCGGGGCCCTCAGA
CTTGATTCAGAAAAAGCTTTACACATAGGAATTGCTGACGAGGTCTTGCAATCTTCAGATGAAA
CTGAGTGTCTCAGAGAGGCACGAGAGTGGCTACAGCAGTTTATCAAAGGGCCACCAGAAGTAAT
TAGAGCTCTGAAAAAATCCATTTCTTCAGGCAGAGAGCTTTGTTTAGAGGAGGCATTGCAGATG
GAAAGAGATCTTTTAGGTACAGTTTGGGGTGGACCTGCCAATTTAGAGGCTGTTGCTAGGAGAG
GAAAGTTTAAGAAATAGTTTAAAAAAAAAATGTACTCTAAGTAAAACTCCAATGATTAATACGT
ATAGAAGTTAACATTAAATGTGAATGTCACAACTACTTTGAAGGCTACTATTAGTATTTGGGTT
TGTTTTTAACAACTGTATTAATGTCTGAGCTCACTGGCCTAATTTTCAGTATATTTGGGCACTT
ACCAAGTAATGTGAAACATCTAGCTAAACTATAAAACACTTTTGGCTTAAAAATGATCAATTCC
CAAATTCCCGTAATAGTTCTTAAGCTATAACCAAAGACCAGTTTTTAAAAGGAAAAACTACACA
AAACTTATTCCTGGTGTTATTTTTAATAAAGTCTTTGTCTTGTCTTACCTGGAAATACTTTACA
AAAATAACTTCATGACACTTAGAAAACAAAAGTGGAGATGGTTCAGGGGATAAGCAAGTATGCA
AAGATCTGATCTTCTGCTCTAAGCAGCTGGAGTAGAAAAGTCATGGGGGATTCTCTTGTGGCAT
GGCAGTGAAAGACCCAGTGTTGTCCCTGGAGTAGCTTAGGCTGCTGCTGTGGTGGTTTGATCCT
TGGCCTAGAGAACTTCCACATGCTGCAGCTGTGGCCACACACACACACACACACACACAAAATT
CATGGAGGATGGCCCTTCTTTTAAATAATTACTAGATTTCTATTTAAAATTATCTACTAAACAA
TGAACTTTCCTCCATGTGGAAAGTCTCCAAAATTAACCAGTCCATTTGTTTGCTCCATAATTTC
CAAACTAGTAATGTACTATAATTCATGTAGTAATTCAGTTTAACTTTACATAAAAACTGCCTAA
GACTTCAGAGATTCATGAAGCATCCTGTAACATACATTTGCATTTTACACCAAATTTCTATTTT
TTTTTCTGAAGAGTAGCTAGCCTTCTTTTATAACTAGCTGTCTTTTAAAAGTAAATTTAATAAA
AATGCACAGGAATTCCTGTTGTGGCGCAGTGGAAACAAATCTGACTAGGAACCATGAGGTTGCG
GGTTCCATCCTTGGCCTCGCTCAGTGGGTTAAAGTTCTGGCGTTGCCATGAGCTGTGGTGTAGG
TTGCAGACAGGGCTCAGATCTGGTGTTGGTGTGGCTCTGGCGTAGGCTGGGCAGCTATGGCTCC
GACTGGACCCCTAGCCTGGGAATCTCCATATGCCGTGGTAGCAGCCCTAAAGAGACAAAAATAA
ATAAATAAAAATGTACAACTCAAACTTTTATGGATCTCTATAATTCAGACTTTAAAAAGCATAA
GTCAAAAAAGTAAGTTGTAATGCTAACCTATCACAAGAGGTAAAATATAACTTTTAAGTAGTGA
CAGTTTATATGTTGTTATAACAATTTGAAAATCATATTAAAAATAACCTGCATATGCTTCATCA
A

hide sequence

RefSeq Acc Id:

XM_021088558 ⟹ XP_020944217

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	35,853,097 - 35,909,314 (+)	NCBI

Sequence:

show sequence

AGGGGATGGGGGGGTGCGACCGAGCGGAAGGGGAAGTTGGCGCCACTGGGTCCTCCAGGACTCT
GTGTCGGTGAAGACTGAGTAGCAGATATTTTCTAGGAAAGAACCACTTTATAGCTCTTCTCCAC
ACGAATTGCAAACAGCCGCCAGCGCAAAGCCGCCACGCAAGCTCACTGCCGTCAATACTTCCGG
GCGCCAGGACGCGGTACTGAGGGACGCGAAGGCCTTTGCCAGGTGAGGGAGAGTAATGGGAAAA
GATGAGTCCAACTTTCCCGGGAAAGTGGAGAAATAGAAATGGCAAGTCTTTTAACGACTTCACC
TGTTCCTATAAGGACAAAATTTCTACATCAAATAGGATTGTCACTTTATAATACCTCTCATGGC
TTCCATGAGGAAGAAGTGAAAAAAAAACTTCAGCAGTTTCCTGGTGGATCTGTTGACCTCCAGA
AAGAAGAAAATGGCCTTGGCATTCTTACTCTGAACAATCCAAGTAAAATGAATGCCTTCTCAGG
TGTTATGATGCTGCAGCTTCTGGAAAAAGTGATTGAGTTGGAAAATTGGACAGAGGGGAAAGGT
GTCATTGTCTGTGGGGCAAAAAATACTTTCTCCTCAGGATCTGATCTGAATGCTGTGAAAGCAC
TAGGAACTCCAGAGGATGGAATGGCTGTATGCATGTTCATGCAAAACACCTTAACAAGATTTAT
GAGACTTCCTTTAATAAGTGTTGCACTGGTTCAAGGTCGGGCACTGGGTGGAGGAGCAGAATTT
ACTACAGCATGTGATTTCAGATTAATGACTACCGAGAGTGAAATCAGATTTGTCCACAGGGAGA
TGGGCATAATACCAAGCTGGGGCGGTGCTGCACGACTGGTTGAAATAATCGGCAGTAGACAAGC
TCTTAAAGTGTTAAGCGGGGCCCTCAGACTTGATTCAGAAAAAGCTTTACACATAGGAATTGCT
GACGAGGTCTTGCAATCTTCAGATGAAACTGAGTGTCTCAGAGAGGCACGAGAGTGGCTACAGC
AGTTTATCAAAGGGCCACCAGAAGTAATTAGAGCTCTGAAAAAATCCATTTCTTCAGGCAGAGA
GCTTTGTTTAGAGGAGGCATTGCAGATGGAAAGAGATCTTTTAGGTACAGTTTGGGGTGGACCT
GCCAATTTAGAGGCTGTTGCTAGGAGAGGAAAGTTTAAGAAATAGTTTAAAAAAAAAATGTACT
CTAAGTAAAACTCCAATGATTAATACGTATAGAAGTTAACATTAAATGTGAATGTCACAACTAC
TTTGAAGGCTACTATTAGTATTTGGGTTTGTTTTTAACAACTGTATTAATGTCTGAGCTCACTG
GCCTAATTTTCAGTATATTTGGGCACTTACCAAGTAATGTGAAACATCTAGCTAAACTATAAAA
CACTTTTGGCTTAAAAATGATCAATTCCCAAATTCCCGTAATAGTTCTTAAGCTATAACCAAAG
ACCAGTTTTTAAAAGGAAAAACTACACAAAACTTATTCCTGGTGTTATTTTTAATAAAGTCTTT
GTCTTGTCTTACCTGGAAATACTTTACAAAAATAACTTCATGACACTTAGAAAACAAAAGTGGA
GATGGTTCAGGGGATAAGCAAGTATGCAAAGATCTGATCTTCTGCTCTAAGCAGCTGGAGTAGA
AAAGTCATGGGGGATTCTCTTGTGGCATGGCAGTGAAAGACCCAGTGTTGTCCCTGGAGTAGCT
TAGGCTGCTGCTGTGGTGGTTTGATCCTTGGCCTAGAGAACTTCCACATGCTGCAGCTGTGGCC
ACACACACACACACACACACACAAAATTCATGGAGGATGGCCCTTCTTTTAAATAATTACTAGA
TTTCTATTTAAAATTATCTACTAAACAATGAACTTTCCTCCATGTGGAAAGTCTCCAAAATTAA
CCAGTCCATTTGTTTGCTCCATAATTTCCAAACTAGTAATGTACTATAATTCATGTAGTAATTC
AGTTTAACTTTACATAAAAACTGCCTAAGACTTCAGAGATTCATGAAGCATCCTGTAACATACA
TTTGCATTTTACACCAAATTTCTATTTTTTTTTCTGAAGAGTAGCTAGCCTTCTTTTATAACTA
GCTGTCTTTTAAAAGTAAATTTAATAAAAATGCACAGGAATTCCTGTTGTGGCGCAGTGGAAAC
AAATCTGACTAGGAACCATGAGGTTGCGGGTTCCATCCTTGGCCTCGCTCAGTGGGTTAAAGTT
CTGGCGTTGCCATGAGCTGTGGTGTAGGTTGCAGACAGGGCTCAGATCTGGTGTTGGTGTGGCT
CTGGCGTAGGCTGGGCAGCTATGGCTCCGACTGGACCCCTAGCCTGGGAATCTCCATATGCCGT
GGTAGCAGCCCTAAAGAGACAAAAATAAATAAATAAAAATGTACAACTCAAACTTTTATGGATC
TCTATAATTCAGACTTTAAAAAGCATAAGTCAAAAAAGTAAGTTGTAATGCTAACCTATCACAA
GAGGTAAAATATAACTTTTAAGTAGTGACAGTTTATATGTTGTTATAACAATTTGAAAATCATA
TTAAAAATAACCTGCATATGCTTCATCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003121262	(Get FASTA)	NCBI Sequence Viewer
	XP_005652739	(Get FASTA)	NCBI Sequence Viewer
	XP_013843913	(Get FASTA)	NCBI Sequence Viewer
	XP_020944214	(Get FASTA)	NCBI Sequence Viewer
	XP_020944217	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000004552
	ENSSSCP00000004552.4
	ENSSSCP00000036988
	ENSSSCP00000036988.1
	ENSSSCP00005028041.1
	ENSSSCP00005028064.1
	ENSSSCP00015001267.1
	ENSSSCP00015001285.1
	ENSSSCP00025034685.1
	ENSSSCP00025034780.1
	ENSSSCP00025034854.1
	ENSSSCP00030033603.1
	ENSSSCP00030033632.1
	ENSSSCP00035000878.1
	ENSSSCP00035000880.1
	ENSSSCP00035000881.1
	ENSSSCP00040038919.1
	ENSSSCP00040038959.1
	ENSSSCP00045038989.1
	ENSSSCP00045039080.1
	ENSSSCP00050003182.1
	ENSSSCP00050003187.1
	ENSSSCP00050003203.1
	ENSSSCP00055036367.1
	ENSSSCP00055036487.1
	ENSSSCP00055036569.1
	ENSSSCP00060017137.1
	ENSSSCP00060017145.1
	ENSSSCP00060017153.1
	ENSSSCP00065011608.1
	ENSSSCP00065011612.1
	ENSSSCP00070026494.1
	ENSSSCP00070026557.1
	ENSSSCP00070026564.1

RefSeq Acc Id:	XP_020944214 ⟸ XM_021088555
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZZC3 (UniProtKB/TrEMBL), A0A4X1UF11 (UniProtKB/TrEMBL), A0A8D0XCB4 (UniProtKB/TrEMBL), A0A8D0UWI7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLTTSPVPIRTKFLHQIGLSLYNTSHGFHEEEVKKKLQQFPGGSVDLQKEENGLGILTLNN PSKMNAFSGVMMLQLLEKVIELENWTEGKGVIVCGAKNTFSSGSDLNAVKALGTPEDGMAVCMF MQNTLTRFMRLPLISVALVQGRALGGGAEFTTACDFRLMTTESEIRFVHREMGIIPSWGGAARL VEIIGSRQALKVLSGALRLDSEKALHIGIADEVLQSSDETECLREAREWLQQFIKGPPEVIRAL KKSISSGRELCLEEALQMERDLLGTVWGGPANLEAVARRGKFKK hide sequence

RefSeq Acc Id:	XP_020944217 ⟸ XM_021088558
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZZC3 (UniProtKB/TrEMBL), A0A4X1UF11 (UniProtKB/TrEMBL), A0A8D0XCB4 (UniProtKB/TrEMBL), A0A8D0UWI7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLTTSPVPIRTKFLHQIGLSLYNTSHGFHEEEVKKKLQQFPGGSVDLQKEENGLGILTLNN PSKMNAFSGVMMLQLLEKVIELENWTEGKGVIVCGAKNTFSSGSDLNAVKALGTPEDGMAVCMF MQNTLTRFMRLPLISVALVQGRALGGGAEFTTACDFRLMTTESEIRFVHREMGIIPSWGGAARL VEIIGSRQALKVLSGALRLDSEKALHIGIADEVLQSSDETECLREAREWLQQFIKGPPEVIRAL KKSISSGRELCLEEALQMERDLLGTVWGGPANLEAVARRGKFKK hide sequence

RefSeq Acc Id:	XP_013843913 ⟸ XM_013988459
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1U9R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLTTSPVPIRTKFLHQIGLSLYNTSHGFHEEEVKKKLQQFPGGSVDLQKEENGLGILTLNN PSKMNAFSGVMMLQLLEKVIELENWTEGKGVIVCGAKNTFSSGSDLNAVKALGTPETSFNKCCT GSRSGTGWRSRIYYSM hide sequence

RefSeq Acc Id:	XP_003121262 ⟸ XM_003121214
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZZC3 (UniProtKB/TrEMBL), A0A4X1UF11 (UniProtKB/TrEMBL), A0A8D0XCB4 (UniProtKB/TrEMBL), A0A8D0UWI7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLTTSPVPIRTKFLHQIGLSLYNTSHGFHEEEVKKKLQQFPGGSVDLQKEENGLGILTLNN PSKMNAFSGVMMLQLLEKVIELENWTEGKGVIVCGAKNTFSSGSDLNAVKALGTPEDGMAVCMF MQNTLTRFMRLPLISVALVQGRALGGGAEFTTACDFRLMTTESEIRFVHREMGIIPSWGGAARL VEIIGSRQALKVLSGALRLDSEKALHIGIADEVLQSSDETECLREAREWLQQFIKGPPEVIRAL KKSISSGRELCLEEALQMERDLLGTVWGGPANLEAVARRGKFKK hide sequence

RefSeq Acc Id:	XP_005652739 ⟸ XM_005652682
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1U9R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASLLTTSPVPIRTKFLHQIGLSLYNTSHGFHEEEVKKKLQQFPGGSVDLQKEENGLGILTLNN PSKMNAFSGVMMLQLLEKVIELENWTEGKGVIVCGAKNTFSSGSDLNAVKALGTPETSFNKCCT GSRSGTGWRSRIYYSM hide sequence

RefSeq Acc Id:

ENSSSCP00000004552 ⟸ ENSSSCT00000004659

RefSeq Acc Id:

ENSSSCP00000036988 ⟸ ENSSSCT00000057506

RefSeq Acc Id:

ENSSSCP00000067468 ⟸ ENSSSCT00000067352

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000004216	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005028636	UniProtKB/TrEMBL
	ENSSSCG00015002922	UniProtKB/TrEMBL
	ENSSSCG00025058301	UniProtKB/TrEMBL
	ENSSSCG00030052641	UniProtKB/TrEMBL
	ENSSSCG00035002108	UniProtKB/TrEMBL
	ENSSSCG00040064192	UniProtKB/TrEMBL
	ENSSSCG00045032669	UniProtKB/TrEMBL
	ENSSSCG00050005488	UniProtKB/TrEMBL
	ENSSSCG00055023173	UniProtKB/TrEMBL
	ENSSSCG00060029950	UniProtKB/TrEMBL
	ENSSSCG00065021252	UniProtKB/TrEMBL
	ENSSSCG00070016137	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000004659	ENTREZGENE
	ENSSSCT00000004659.5	UniProtKB/TrEMBL
	ENSSSCT00000057506	ENTREZGENE
	ENSSSCT00000057506.2	UniProtKB/TrEMBL
	ENSSSCT00005045687.1	UniProtKB/TrEMBL
	ENSSSCT00005045730.1	UniProtKB/TrEMBL
	ENSSSCT00015003697.1	UniProtKB/TrEMBL
	ENSSSCT00015003756.1	UniProtKB/TrEMBL
	ENSSSCT00025079877.1	UniProtKB/TrEMBL
	ENSSSCT00025080057.1	UniProtKB/TrEMBL
	ENSSSCT00025080196.1	UniProtKB/TrEMBL
	ENSSSCT00030073463.1	UniProtKB/TrEMBL
	ENSSSCT00030073515.1	UniProtKB/TrEMBL
	ENSSSCT00035002638.1	UniProtKB/TrEMBL
	ENSSSCT00035002642.1	UniProtKB/TrEMBL
	ENSSSCT00035002645.1	UniProtKB/TrEMBL
	ENSSSCT00040088547.1	UniProtKB/TrEMBL
	ENSSSCT00040088635.1	UniProtKB/TrEMBL
	ENSSSCT00045055923.1	UniProtKB/TrEMBL
	ENSSSCT00045056036.1	UniProtKB/TrEMBL
	ENSSSCT00050007486.1	UniProtKB/TrEMBL
	ENSSSCT00050007503.1	UniProtKB/TrEMBL
	ENSSSCT00050007551.1	UniProtKB/TrEMBL
	ENSSSCT00055045611.1	UniProtKB/TrEMBL
	ENSSSCT00055045758.1	UniProtKB/TrEMBL
	ENSSSCT00055045857.1	UniProtKB/TrEMBL
	ENSSSCT00060040468.1	UniProtKB/TrEMBL
	ENSSSCT00060040482.1	UniProtKB/TrEMBL
	ENSSSCT00060040498.1	UniProtKB/TrEMBL
	ENSSSCT00065028338.1	UniProtKB/TrEMBL
	ENSSSCT00065028345.1	UniProtKB/TrEMBL
	ENSSSCT00070031781.1	UniProtKB/TrEMBL
	ENSSSCT00070031856.1	UniProtKB/TrEMBL
	ENSSSCT00070031864.1	UniProtKB/TrEMBL
InterPro	ClpP/crotonase-like_dom_sf	UniProtKB/TrEMBL
	Enoyl-CoA_hyd/isom_CS	UniProtKB/TrEMBL
	Enoyl-CoA_hydra/iso	UniProtKB/TrEMBL
KEGG Report	ssc:100512509	UniProtKB/TrEMBL
NCBI Gene	ECHDC1	ENTREZGENE
PANTHER	ENOYL-COA HYDRATASE-RELATED	UniProtKB/TrEMBL
	ETHYLMALONYL-COA DECARBOXYLASE	UniProtKB/TrEMBL
Pfam	ECH_1	UniProtKB/TrEMBL
PROSITE	ENOYL_COA_HYDRATASE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52096	UniProtKB/TrEMBL
UniProt	A0A286ZZC3	ENTREZGENE
	A0A4X1U9R9	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UC77_PIG	UniProtKB/TrEMBL
	A0A4X1UF11	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0UWI7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0XCB4	ENTREZGENE, UniProtKB/TrEMBL
	F1S2X3_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A286ZZC3	UniProtKB/TrEMBL
VGNC ID	VGNC:97972	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD