ERO1A (endoplasmic reticulum oxidoreductase 1 alpha) - Rat Genome Database

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Gene: ERO1A (endoplasmic reticulum oxidoreductase 1 alpha) Sus scrofa
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Symbol: ERO1A
Name: endoplasmic reticulum oxidoreductase 1 alpha
RGD ID: 14041929
Description: ENCODES a protein that exhibits oxidoreductase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog); INTERACTS WITH cadmium atom; cadmium dichloride; deoxynivalenol
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Endoplasmic oxidoreductin-1-like protein; endoplasmic reticulum oxidoreductase alpha; endoplasmic reticulum oxidoreductin-1-like protein; ERO1-L; ERO1-L-alpha; ERO1-like protein alpha; ERO1L; Oxidoreductin-1-L-alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,265,261 - 182,318,195 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,268,651 - 182,318,147 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,436,374 - 202,588,694 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21664357   PMID:22301074   PMID:30032202   PMID:34287039  


Genomics

Comparative Map Data
ERO1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,265,261 - 182,318,195 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,268,651 - 182,318,147 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,436,374 - 202,588,694 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ERO1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,639,915 - 52,695,558 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,639,915 - 52,695,900 (-)EnsemblGRCh38hg38GRCh38
GRCh371453,106,633 - 53,162,276 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,178,355 - 52,232,169 (-)NCBINCBI36Build 36hg18NCBI36
Build 341452,178,356 - 52,232,169NCBI
Celera1432,976,214 - 33,030,020 (-)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1433,269,409 - 33,323,505 (-)NCBIHuRef
CHM1_11453,047,533 - 53,101,335 (-)NCBICHM1_1
T2T-CHM13v2.01446,847,757 - 46,903,365 (-)NCBIT2T-CHM13v2.0
Ero1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,520,544 - 45,556,029 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,520,544 - 45,556,228 (-)EnsemblGRCm39 Ensembl
GRCm381445,283,087 - 45,318,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,283,087 - 45,318,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,903,996 - 45,938,202 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,206,198 - 44,240,404 (-)NCBIMGSCv36mm8
Celera1441,464,909 - 41,498,352 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.86NCBI
Ero1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81520,974,771 - 21,010,170 (-)NCBIGRCr8
mRatBN7.21518,495,037 - 18,530,440 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,492,945 - 18,530,478 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,289,698 - 21,325,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,246,643 - 22,282,158 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,503,217 - 20,538,731 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,619,947 - 19,655,381 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,619,973 - 19,655,381 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,585,168 - 23,620,355 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,169,438 - 21,205,536 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11521,169,450 - 21,205,536NCBI
Celera1518,923,324 - 18,958,689 (-)NCBICelera
Cytogenetic Map15p14NCBI
Ero1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,502,554 - 10,530,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,495,892 - 10,533,383 (+)NCBIChiLan1.0ChiLan1.0
ERO1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,770,587 - 53,826,868 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11452,987,098 - 53,043,159 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01433,236,087 - 33,292,127 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,520,048 - 51,575,792 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,520,048 - 51,575,798 (-)Ensemblpanpan1.1panPan2
ERO1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,864,642 - 28,913,864 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,864,925 - 28,914,368 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,609,553 - 28,658,814 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0829,030,663 - 29,080,527 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl829,029,758 - 29,081,013 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1828,704,719 - 28,754,465 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0828,776,955 - 28,826,980 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0829,105,676 - 29,155,434 (-)NCBIUU_Cfam_GSD_1.0
Ero1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,380,350 - 76,425,758 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,154,065 - 2,199,926 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,154,517 - 2,199,913 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ERO1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,708,521 - 29,777,939 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,717,710 - 29,777,918 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605317,992,077 - 18,051,108 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ero1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,425,437 - 16,473,043 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,425,496 - 16,476,120 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ERO1A
803 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 8 2 3 5 22 3 3
Low 2 2 2 1 2
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000048184   ⟹   ENSSSCP00000051791
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1182,267,899 - 182,318,183 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000059363   ⟹   ENSSSCP00000054517
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1182,265,261 - 182,318,195 (-)Ensembl
RefSeq Acc Id: NM_001137627   ⟹   NP_001131099
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11182,268,651 - 182,318,147 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001131099   ⟸   NM_001137627
- Peptide Label: precursor
- UniProtKB: B6CVD7 (UniProtKB/Swiss-Prot),   A0A4X1WD67 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000054517   ⟸   ENSSSCT00000059363
RefSeq Acc Id: ENSSSCP00000051791   ⟸   ENSSSCT00000048184


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000005037 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015040725 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00025026083 UniProtKB/TrEMBL
  ENSSSCG00030038567 UniProtKB/TrEMBL
  ENSSSCG00035072270 UniProtKB/TrEMBL
  ENSSSCG00040019923 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00045009988 UniProtKB/TrEMBL
  ENSSSCG00050034313 UniProtKB/TrEMBL
  ENSSSCG00055008004 UniProtKB/TrEMBL
  ENSSSCG00060034808 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00065003339 UniProtKB/TrEMBL
  ENSSSCG00070030612 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000048184 ENTREZGENE
  ENSSSCT00000048184.3 UniProtKB/TrEMBL
  ENSSSCT00000059363.2 UniProtKB/TrEMBL
  ENSSSCT00015055167.1 UniProtKB/TrEMBL
  ENSSSCT00015055699.1 UniProtKB/Swiss-Prot
  ENSSSCT00015055954.1 UniProtKB/TrEMBL
  ENSSSCT00025035255.1 UniProtKB/TrEMBL
  ENSSSCT00025035404.1 UniProtKB/TrEMBL
  ENSSSCT00030053695.1 UniProtKB/TrEMBL
  ENSSSCT00030053738.1 UniProtKB/TrEMBL
  ENSSSCT00030053774.1 UniProtKB/TrEMBL
  ENSSSCT00035097792.1 UniProtKB/TrEMBL
  ENSSSCT00035097807.1 UniProtKB/TrEMBL
  ENSSSCT00035097838.1 UniProtKB/TrEMBL
  ENSSSCT00040027162.1 UniProtKB/Swiss-Prot
  ENSSSCT00040027173.1 UniProtKB/TrEMBL
  ENSSSCT00040027228.1 UniProtKB/TrEMBL
  ENSSSCT00045016928.1 UniProtKB/TrEMBL
  ENSSSCT00045016948.1 UniProtKB/TrEMBL
  ENSSSCT00050046006.1 UniProtKB/TrEMBL
  ENSSSCT00050046013.1 UniProtKB/TrEMBL
  ENSSSCT00055015608.1 UniProtKB/TrEMBL
  ENSSSCT00055015675.1 UniProtKB/TrEMBL
  ENSSSCT00060047182.1 UniProtKB/TrEMBL
  ENSSSCT00060047193.1 UniProtKB/TrEMBL
  ENSSSCT00060047201.1 UniProtKB/TrEMBL
  ENSSSCT00060047212.1 UniProtKB/Swiss-Prot
  ENSSSCT00065004527.1 UniProtKB/TrEMBL
  ENSSSCT00065004533.1 UniProtKB/TrEMBL
  ENSSSCT00065004542.1 UniProtKB/TrEMBL
  ENSSSCT00070061633.1 UniProtKB/Swiss-Prot
  ENSSSCT00070061634.1 UniProtKB/TrEMBL
  ENSSSCT00070061635.1 UniProtKB/TrEMBL
InterPro Ero1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERO1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:100192435 UniProtKB/Swiss-Prot
NCBI Gene ERO1A ENTREZGENE
PANTHER ERO1-LIKE PROTEIN ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12613 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ERO1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PIRSF ERO1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF110019 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A287BEL0_PIG UniProtKB/TrEMBL
  A0A4X1WD67 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1WDC7_PIG UniProtKB/TrEMBL
  A0A5S6I475_PIG UniProtKB/TrEMBL
  A0A8D0RHW9_PIG UniProtKB/TrEMBL
  A0A8D1BAT2_PIG UniProtKB/TrEMBL
  B6CVD7 ENTREZGENE, UniProtKB/Swiss-Prot
VGNC ID VGNC:87779 ENTREZGENE