EHD2 (EH domain containing 2) - Rat Genome Database

Name: EHD2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: EHD2 (EH domain containing 2) Sus scrofa

Analyze

Symbol:

EHD2

Name:

EH domain containing 2

RGD ID:

14035752

Description:

ENCODES a protein that exhibits ATP binding (inferred); cadherin binding (inferred); calcium ion binding (inferred); INVOLVED IN cortical actin cytoskeleton organization (ortholog); endocytosis (ortholog); FOUND IN caveola (inferred); clathrin coat of coated pit (inferred); cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

EH domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EHD2 (EH domain containing 2)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ehd2 (EH-domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ehd2 (EH-domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ehd2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EHD2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EHD2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ehd2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EHD2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ehd2 (EH domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	53,423,563 - 53,443,224 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	53,423,489 - 53,442,007 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	48,953,673 - 48,972,126 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium assembly (IBA)

cortical actin cytoskeleton organization (IEA,ISO)

endocytic recycling (IBA,IEA)

endocytosis (IBA,IEA,ISO)

endosomal transport (IEA)

plasma membrane tubulation (IEA)

positive regulation of endocytic recycling (IEA)

positive regulation of myoblast fusion (IEA)

protein localization to plasma membrane (IBA,IEA)

Cellular Component

caveola (IEA)

clathrin coat of coated pit (IEA)

cytoplasm (IBA,IEA)

cytosol (IEA)

early endosome (IBA)

endocytic vesicle (IBA)

endosome (IEA)

endosome membrane (IEA)

intercellular bridge (IEA)

membrane (IEA)

microtubule cytoskeleton (IEA)

nucleus (IEA)

perinuclear region of cytoplasm (IBA,IEA)

plasma membrane (IBA,IEA)

recycling endosome membrane (IBA,IEA)

Molecular Function

ATP binding (IEA)

cadherin binding (IEA)

calcium ion binding (IEA)

GTP binding (IEA)

identical protein binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

protein domain specific binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

EHD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	53,423,563 - 53,443,224 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	53,423,489 - 53,442,007 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	48,953,673 - 48,972,126 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EHD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	47,713,422 - 47,743,134 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	47,713,422 - 47,743,134 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	48,216,679 - 48,246,391 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	52,908,502 - 52,938,203 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	52,908,501 - 52,938,202	NCBI
Celera	19	45,022,299 - 45,052,093 (+)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	44,643,202 - 44,673,032 (+)	NCBI		HuRef
CHM1_1	19	48,218,935 - 48,248,702 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	50,544,240 - 50,573,946 (+)	NCBI		T2T-CHM13v2.0

Ehd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	15,680,883 - 15,701,402 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	15,680,883 - 15,701,492 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	15,946,963 - 15,967,535 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	15,946,958 - 15,967,567 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	16,534,336 - 16,552,884 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	15,107,509 - 15,126,057 (-)	NCBI		MGSCv36	mm8
Celera	7	13,147,692 - 13,166,237 (-)	NCBI		Celera
Cytogenetic Map	7	A2	NCBI
cM Map	7	8.65	NCBI

Ehd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	85,767,757 - 85,786,974 (-)	NCBI		GRCr8
mRatBN7.2	1	76,639,568 - 76,658,747 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	76,637,482 - 76,658,783 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	82,015,477 - 82,032,689 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	90,579,536 - 90,596,748 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	83,770,617 - 83,787,829 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	77,847,599 - 77,865,870 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	77,847,600 - 77,865,870 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	79,112,279 - 79,130,529 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	76,292,179 - 76,310,584 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	71,130,719 - 71,149,079 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Ehd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955574	1,490,877 - 1,503,943 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955574	1,490,877 - 1,503,651 (+)	NCBI	ChiLan1.0	ChiLan1.0

EHD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	53,866,762 - 53,896,564 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	55,736,790 - 55,766,387 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	44,707,747 - 44,737,370 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	53,361,831 - 53,390,877 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	53,365,510 - 53,389,159 (+)	Ensembl	panpan1.1		panPan2

EHD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	108,317,471 - 108,336,032 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	108,318,680 - 108,345,885 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	107,799,663 - 107,818,190 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	108,843,517 - 108,862,065 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	108,843,515 - 108,862,033 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	108,511,223 - 108,529,700 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	108,155,771 - 108,174,509 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	109,023,931 - 109,042,491 (-)	NCBI		UU_Cfam_GSD_1.0

Ehd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	19,698,492 - 19,713,548 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936664	1,316,621 - 1,331,678 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EHD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	41,034,263 - 41,054,340 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	41,034,274 - 41,056,401 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	20,787,175 - 20,807,886 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ehd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	6,155,839 - 6,168,628 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	6,156,051 - 6,168,638 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in EHD2
265 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2
Low	8	4	1	5	2	20	2	3	1
Below cutoff			2			3			2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003355959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013998550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP565353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01042345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000025210 ⟹ ENSSSCP00000022001

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	53,423,563 - 53,443,224 (+)	Ensembl

RefSeq Acc Id:

XM_003355959 ⟹ XP_003356007

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	53,423,489 - 53,442,007 (+)	NCBI

Sequence:

show sequence

GGGGGGGGCGCCTCGTCCCGCCCGCACCCCGGCCCCTCCCGTCCCTCCTCCCGGTTCTGGGCCC
CACCCGGCTCAGACGGCTCCGGACGGGACTTCGAGCACAGGCCGCTCCGCGGGCGCCTCGGATC
CCCGCGGGACCCCCCCCCACCTTCCCGCCCAGCTCGGTCGCCGGGTGCAGCCGCCTGCGCTCCC
CACCGGTAGCTCTCCTCCCCCTGCTCGGGTGCATCTTCTTCAGGGAGCCGAGTGGGCCGGTGCA
CAGCCACCATGTTCAGCTGGCTGAAGCGGGGTGGGGCGCGGGGCCAGCAGCCCGAGGCCATCCG
CACGGTGACCTCGGCCCTCAAGGAGCTGTACCGCGAGAAGCTGCTGCCCCTCGAGGAGCACTAC
CGCTTCGGGGCCTTCCATTCGCCCGCCCTGGAGGATGCTGACTTCGACGGCAAACCCATGGTGC
TGGTGGCCGGACAGTACAGCACAGGCAAGACCAGTTTCATCCAGTACCTGCTGGAGCAGGAGGT
GCCCGGCTCCCGCGTGGGGCCCGAGCCCACTACCGACTGCTTCGTGGCCGTCATGCATGGTGAG
ACCGAGGGCACGGTGCCTGGCAACGCCCTCGTCGTGGACCCGGACAAGCCCTTCCGAAAACTCA
ACCCCTTTGGGAACACCTTCCTCAACAGGTTCATGTGCGCCCAGCTCCCCAACCAGGTCCTGGA
GAGCATCAGTATCATCGATACTCCAGGCATCCTGTCGGGGGCCAAACAGCGAGTGAGCCGAGGC
TACGACTTCCCGGCCGTGCTGCGCTGGTTCGCCGAGCGCGTGGACCTCATCATCCTGCTCTTCG
ATGCCCACAAGCTGGAGATCTCGGACGAGTTCTCCGAGGCCATCGGCGCCCTGCGTGGCCACGA
GGACAAGATCCGCGTGGTGCTCAACAAGGCTGACATGGTGGAGACGCAGCAGCTGATGCGCGTC
TACGGGGCGCTCATGTGGGCGCTGGGCAAGGTGGTGGGCACGCCTGAGGTGCTGCGCGTCTACA
TCGGTTCCTTCTGGTCCCAACCACTCCTGGTGCCCGACAACCGGCGCCTCTTCGAGCTGGAGGA
GCAAGACCTCTTCCGAGACATCCAGGGCCTGCCGCGCCACGCCGCGCTGCGCAAGCTCAATGAT
CTGGTGAAGAGAGCCCGGCTGGTGCGGGTTCACGCGTATATCATCAGCTACCTGAAGAAGGAGA
TGCCCTCCGTGTTTGGGAAGGAGAACAAGAAGAAGCAGCTGATCCTCAAGCTGCCTGTTATCTT
TGCCAAGATTCAGCTGGAGCATCACATCTCTCCCGGTGACTTCCCGGACTGCCAGAAGATGCAG
GAGCTGCTGATGGCTCACGACTTCACCAAGTTCCACTCGCTAAAGCCGAAACTGCTGGAGGCGC
TGGATGAGATGCTGACACACGACATCGCCAAGCTCATGCCCCTGCTCCGGCAGGAGGAGCTGGA
GAGCACGGAGGTGGGCGTGCAGGGGGGTGCCTTCGAGGGCACCCACATGGGCCCCTTCGTGGAG
CGGGGGCCCGATGAGGCCCTGGAGGACGGCGAGGAGGGCTCGGATGACGAGGCCGAGTGGGTGG
TGACCAAGGACAAGTCCAAATACGACGAGATCTTTTATAACCTGGCGCCGGCTGATGGCAAGCT
GAGTGGCACCAAGGCCAAGACCTGGATGGTGGGCACCAAGCTGCCCAACTCTGTGCTGGGCCGC
ATCTGGAAGCTGAGCGACGTCGACCGAGACGGCATGCTGGACGACGAGGAGTTCGCGCTGGCCA
GCCACCTCATCGAGGCCAAGCTCGAGGGCCACGGGCTGCCCACCAACCTGCCCCGCCGCCTGGT
GCCGCCCTCCAAGCGGCGCCACAAGGGCTCGGCCGAGTGAGCCGGCCGCCTGCCTGCCAGCCCT
CCCTCCCACTCGCCCTGCTGTGGCTCCCCACCCTGGCGCACGCGCACCCCGCCTGCCCACTCCC
CCAGCTGTAAGGAGGGGCGTCCCTCTGCCCTCCGCCGCCAGACAGGGGGCACCATGGGAGGGGC
TAGGTTTCTCTGCCCACCCTTCACACCTCTGTGCTCACATACACCTGGCACACTCGGACACGAA
CACACACGCACACACACACGCAGGCATCCGTCCATGCATCATTCATTCAAATATTTATTGAGCA
TCTACTCTGTTCATATGTTCAGGGCTCCTTCCTACACTGGGGATTACAGCAGAGAGCCCTCGTG
GAGCCCGCTTTCTCAGGAGAGAGCGCCTGCAGAGTCACTCAAAGACACACACACACACACCAGC
CCTAACCAGTCTGATCCCTGATTCTGATCCCCTCTCCCCACAAGTGAGCGGCCACTTGGTTGAA
ATGACTAAGAGACAGGCCTCCCCCCACCTCCCACCCCTGGCTCCTTCTTGCCCTGCCAGGCAAG
GACCCTCCACTCCATCCTGGCCTCGGGACCACTGGGGGCTCAGAGGGGAGACGCAACCTCCTAC
TTCCTCAGCTGCACCCCTCTTAGCCCCTTGCCCCAGTTCAGGTCGCACCCCTTTCTTTAATAAG
GGGAAAGCCCGGTCCTCCCACCCTTCCTGCTCCTCCCTGCCCCCCCGACTTCTGTCTCTGCTCA
CCTGCCCTGGATTGAAAGCCCAGCCTGCTCCCCCGACCCCTCAGGCTCCCCACAGCTGGTGGTC
CGAATTTTAGACTGCGAATTTTAGACAGCCTCCCGAGCCACCATCAGGCCATATTTAAGTGGAG
TCCCTGCCAGAAACTAAGGCCCCAGGACGTTATTTTTAGACTCCTTTTCAGGGACGTCGTGGGG
GGAGGGGCTCTTGGTGCTACAGCCCCCCCTCCCCTACAGGGCACCCTCACCCCCCTACACACGC
ATTTTCCTGCCTTCACCACATATTAGTGCTTGACCTTGGTGGGGGACCCCACGGAAAAGATGGA
GAAGAGCAACATAGATGGGGCCCATGCCCCTCCAGGGTGCTGGCTGGGATTCCCGCTCCCATCA
CCCCTCACCTCATGCCTGGGAAGGGCCTGTGAGCATAATAGGAACGGTTCCCACAGTGCAAATA
AAGCCAAGGCTTCTTTCCCTGA

hide sequence

RefSeq Acc Id:

XM_013998550 ⟹ XP_013854004

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	53,425,568 - 53,442,007 (+)	NCBI

Sequence:

show sequence

GCCGCCCACCATCGACACCCTCTCCTCCCGCAGGTAGCTCTCCTCCCCCTGCTCGGGTGCATCT
TCTTCAGGGAGCCGAGTGGGCCGGTGCACAGCCACCATGTTCAGCTGGCTGAAGCGGGGTGGGG
CGCGGGGCCAGCAGCCCGAGGCCATCCGCACGGTGACCTCGGCCCTCAAGGAGCTGTACCGCGA
GAAGCTGCTGCCCCTCGAGGAGCACTACCGCTTCGGGGCCTTCCATTCGCCCGCCCTGGAGGAT
GCTGACTTCGACGGCAAACCCATGGTGCTGGTGGCCGGACAGTACAGCACAGGCAAGACCAGTT
TCATCCAGTACCTGCTGGAGCAGGAGGTGCCCGGCTCCCGCGTGGGGCCCGAGCCCACTACCGA
CTGCTTCGTGGCCGTCATGCATGGTGAGACCGAGGGCACGGTGCCTGGCAACGCCCTCGTCGTG
GACCCGGACAAGCCCTTCCGAAAACTCAACCCCTTTGGGAACACCTTCCTCAACAGGTTCATGT
GCGCCCAGCTCCCCAACCAGGTCCTGGAGAGCATCAGTATCATCGATACTCCAGGCATCCTGTC
GGGGGCCAAACAGCGAGTGAGCCGAGGCTACGACTTCCCGGCCGTGCTGCGCTGGTTCGCCGAG
CGCGTGGACCTCATCATCCTGCTCTTCGATGCCCACAAGCTGGAGATCTCGGACGAGTTCTCCG
AGGCCATCGGCGCCCTGCGTGGCCACGAGGACAAGATCCGCGTGGTGCTCAACAAGGCTGACAT
GGTGGAGACGCAGCAGCTGATGCGCGTCTACGGGGCGCTCATGTGGGCGCTGGGCAAGGTGGTG
GGCACGCCTGAGGTGCTGCGCGTCTACATCGGTTCCTTCTGGTCCCAACCACTCCTGGTGCCCG
ACAACCGGCGCCTCTTCGAGCTGGAGGAGCAAGACCTCTTCCGAGACATCCAGGGCCTGCCGCG
CCACGCCGCGCTGCGCAAGCTCAATGATCTGGTGAAGAGAGCCCGGCTGGTGCGGGTTCACGCG
TATATCATCAGCTACCTGAAGAAGGAGATGCCCTCCGTGTTTGGGAAGGAGAACAAGAAGAAGC
AGCTGATCCTCAAGCTGCCTGTTATCTTTGCCAAGATTCAGCTGGAGCATCACATCTCTCCCGG
TGACTTCCCGGACTGCCAGAAGATGCAGGAGCTGCTGATGGCTCACGACTTCACCAAGTTCCAC
TCGCTAAAGCCGAAACTGCTGGAGGCGCTGGATGAGATGCTGACACACGACATCGCCAAGCTCA
TGCCCCTGCTCCGGCAGGAGGAGCTGGAGAGCACGGAGGTGGGCGTGCAGGGGGGTGCCTTCGA
GGGCACCCACATGGGCCCCTTCGTGGAGCGGGGGCCCGATGAGGCCCTGGAGGACGGCGAGGAG
GGCTCGGATGACGAGGCCGAGTGGGTGGTGACCAAGGACAAGTCCAAATACGACGAGATCTTTT
ATAACCTGGCGCCGGCTGATGGCAAGCTGAGTGGCACCAAGGCCAAGACCTGGATGGTGGGCAC
CAAGCTGCCCAACTCTGTGCTGGGCCGCATCTGGAAGCTGAGCGACGTCGACCGAGACGGCATG
CTGGACGACGAGGAGTTCGCGCTGGCCAGCCACCTCATCGAGGCCAAGCTCGAGGGCCACGGGC
TGCCCACCAACCTGCCCCGCCGCCTGGTGCCGCCCTCCAAGCGGCGCCACAAGGGCTCGGCCGA
GTGAGCCGGCCGCCTGCCTGCCAGCCCTCCCTCCCACTCGCCCTGCTGTGGCTCCCCACCCTGG
CGCACGCGCACCCCGCCTGCCCACTCCCCCAGCTGTAAGGAGGGGCGTCCCTCTGCCCTCCGCC
GCCAGACAGGGGGCACCATGGGAGGGGCTAGGTTTCTCTGCCCACCCTTCACACCTCTGTGCTC
ACATACACCTGGCACACTCGGACACGAACACACACGCACACACACACGCAGGCATCCGTCCATG
CATCATTCATTCAAATATTTATTGAGCATCTACTCTGTTCATATGTTCAGGGCTCCTTCCTACA
CTGGGGATTACAGCAGAGAGCCCTCGTGGAGCCCGCTTTCTCAGGAGAGAGCGCCTGCAGAGTC
ACTCAAAGACACACACACACACACCAGCCCTAACCAGTCTGATCCCTGATTCTGATCCCCTCTC
CCCACAAGTGAGCGGCCACTTGGTTGAAATGACTAAGAGACAGGCCTCCCCCCACCTCCCACCC
CTGGCTCCTTCTTGCCCTGCCAGGCAAGGACCCTCCACTCCATCCTGGCCTCGGGACCACTGGG
GGCTCAGAGGGGAGACGCAACCTCCTACTTCCTCAGCTGCACCCCTCTTAGCCCCTTGCCCCAG
TTCAGGTCGCACCCCTTTCTTTAATAAGGGGAAAGCCCGGTCCTCCCACCCTTCCTGCTCCTCC
CTGCCCCCCCGACTTCTGTCTCTGCTCACCTGCCCTGGATTGAAAGCCCAGCCTGCTCCCCCGA
CCCCTCAGGCTCCCCACAGCTGGTGGTCCGAATTTTAGACTGCGAATTTTAGACAGCCTCCCGA
GCCACCATCAGGCCATATTTAAGTGGAGTCCCTGCCAGAAACTAAGGCCCCAGGACGTTATTTT
TAGACTCCTTTTCAGGGACGTCGTGGGGGGAGGGGCTCTTGGTGCTACAGCCCCCCCTCCCCTA
CAGGGCACCCTCACCCCCCTACACACGCATTTTCCTGCCTTCACCACATATTAGTGCTTGACCT
TGGTGGGGGACCCCACGGAAAAGATGGAGAAGAGCAACATAGATGGGGCCCATGCCCCTCCAGG
GTGCTGGCTGGGATTCCCGCTCCCATCACCCCTCACCTCATGCCTGGGAAGGGCCTGTGAGCAT
AATAGGAACGGTTCCCACAGTGCAAATAAAGCCAAGGCTTCTTTCCCTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003356007	(Get FASTA)	NCBI Sequence Viewer
	XP_013854004	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000022001
	ENSSSCP00000022001.1
	ENSSSCP00025008222.1
	ENSSSCP00030035248.1
	ENSSSCP00035029303.1
	ENSSSCP00040002439.1
	ENSSSCP00045015629.1
	ENSSSCP00050027692.1
	ENSSSCP00055040190.1
	ENSSSCP00060037293.1
	ENSSSCP00065035628.1
	ENSSSCP00070047819.1

RefSeq Acc Id:

XP_003356007 ⟸ XM_003355959

- UniProtKB:

I3LD72 (UniProtKB/TrEMBL), A0A8D0QZ29 (UniProtKB/TrEMBL), A0A4X1W1K9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSWLKRGGARGQQPEAIRTVTSALKELYREKLLPLEEHYRFGAFHSPALEDADFDGKPMVLVA
GQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNALVVDPDKPFRKLNPF
GNTFLNRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAH
KLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGS
FWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKEMPS
VFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKMQELLMAHDFTKFHSLKPKLLEALDE
MLTHDIAKLMPLLRQEELESTEVGVQGGAFEGTHMGPFVERGPDEALEDGEEGSDDEAEWVVTK
DKSKYDEIFYNLAPADGKLSGTKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHL
IEAKLEGHGLPTNLPRRLVPPSKRRHKGSAE

hide sequence

RefSeq Acc Id:

XP_013854004 ⟸ XM_013998550

- UniProtKB:

I3LD72 (UniProtKB/TrEMBL), A0A8D0QZ29 (UniProtKB/TrEMBL), A0A4X1W1K9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSWLKRGGARGQQPEAIRTVTSALKELYREKLLPLEEHYRFGAFHSPALEDADFDGKPMVLVA
GQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNALVVDPDKPFRKLNPF
GNTFLNRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAH
KLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGS
FWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKEMPS
VFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKMQELLMAHDFTKFHSLKPKLLEALDE
MLTHDIAKLMPLLRQEELESTEVGVQGGAFEGTHMGPFVERGPDEALEDGEEGSDDEAEWVVTK
DKSKYDEIFYNLAPADGKLSGTKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHL
IEAKLEGHGLPTNLPRRLVPPSKRRHKGSAE

hide sequence

RefSeq Acc Id:

ENSSSCP00000022001 ⟸ ENSSSCT00000025210

Protein Domains

Dynamin-type G EF-hand EH

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000023371	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025015031	UniProtKB/TrEMBL
	ENSSSCG00030055389	UniProtKB/TrEMBL
	ENSSSCG00035054053	UniProtKB/TrEMBL
	ENSSSCG00040004621	UniProtKB/TrEMBL
	ENSSSCG00045013299	UniProtKB/TrEMBL
	ENSSSCG00050047204	UniProtKB/TrEMBL
	ENSSSCG00055025443	UniProtKB/TrEMBL
	ENSSSCG00060063238	UniProtKB/TrEMBL
	ENSSSCG00065059725	UniProtKB/TrEMBL
	ENSSSCG00070028055	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000025210	ENTREZGENE
	ENSSSCT00000025210.3	UniProtKB/TrEMBL
	ENSSSCT00025020112.1	UniProtKB/TrEMBL
	ENSSSCT00030077182.1	UniProtKB/TrEMBL
	ENSSSCT00035072157.1	UniProtKB/TrEMBL
	ENSSSCT00040006156.1	UniProtKB/TrEMBL
	ENSSSCT00045022667.1	UniProtKB/TrEMBL
	ENSSSCT00050064299.1	UniProtKB/TrEMBL
	ENSSSCT00055050292.1	UniProtKB/TrEMBL
	ENSSSCT00060086262.1	UniProtKB/TrEMBL
	ENSSSCT00065081803.1	UniProtKB/TrEMBL
	ENSSSCT00070056287.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.268.20	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	DUF5600	UniProtKB/TrEMBL
	Dynamin_N	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	EH_dom	UniProtKB/TrEMBL
	EHD_N	UniProtKB/TrEMBL
	G_DYNAMIN_dom	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	ssc:100624668	UniProtKB/TrEMBL
NCBI Gene	EHD2	ENTREZGENE
PANTHER	EH DOMAIN	UniProtKB/TrEMBL
	EPIDERMAL GROWTH FACTOR RECEPTOR PATHWAY SUBSTRATE CLONE 15, ISOFORM A	UniProtKB/TrEMBL
Pfam	DUF5600	UniProtKB/TrEMBL
	Dynamin_N	UniProtKB/TrEMBL
	EF-hand_4	UniProtKB/TrEMBL
	EHD_N	UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
	G_DYNAMIN_2	UniProtKB/TrEMBL
	PS50031	UniProtKB/TrEMBL
SMART	SM00027	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A4X1W1K9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0QZ29	ENTREZGENE, UniProtKB/TrEMBL
	I3LD72	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:87596	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message