ADAM3A (ADAM metallopeptidase domain 3A (cyritestin 1)) - Rat Genome Database

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Gene: ADAM3A (ADAM metallopeptidase domain 3A (cyritestin 1)) Sus scrofa
Analyze
Symbol: ADAM3A
Name: ADAM metallopeptidase domain 3A (cyritestin 1)
RGD ID: 14013454
Description: ENCODES a protein that exhibits metalloendopeptidase activity (inferred); INVOLVED IN binding of sperm to zona pellucida (inferred); cell adhesion (inferred); male gonad development (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl179,088,860 - 9,166,340 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1179,088,864 - 9,166,263 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21711,008,026 - 11,038,539 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in ADAM3A
1836 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system nervous system reproductive system respiratory system
High
Medium
Low 2 1 3 8 1 1
Below cutoff 4 2 2 11

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000007677   ⟹   ENSSSCP00000007470
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl179,088,860 - 9,166,340 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000085909   ⟹   ENSSSCP00000070686
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl179,085,199 - 9,166,340 (-)Ensembl
RefSeq Acc Id: NM_001097513   ⟹   NP_001090982
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1179,088,864 - 9,166,263 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001090982   ⟸   NM_001097513
- Peptide Label: precursor
- UniProtKB: A5A4F6 (UniProtKB/TrEMBL),   A0A8D2CHJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000070686   ⟸   ENSSSCT00000085909
RefSeq Acc Id: ENSSSCP00000007470   ⟸   ENSSSCT00000007677
Protein Domains
Disintegrin   EGF-like   Peptidase M12B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000007009 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005003106 UniProtKB/TrEMBL
  ENSSSCG00015032790 UniProtKB/TrEMBL
  ENSSSCG00025030624 UniProtKB/TrEMBL
  ENSSSCG00030069815 UniProtKB/TrEMBL
  ENSSSCG00035034815 UniProtKB/TrEMBL
  ENSSSCG00040073971 UniProtKB/TrEMBL
  ENSSSCG00045020384 UniProtKB/TrEMBL
  ENSSSCG00050021017 UniProtKB/TrEMBL
  ENSSSCG00055006089 UniProtKB/TrEMBL
  ENSSSCG00060035366 UniProtKB/TrEMBL
  ENSSSCG00065075131 UniProtKB/TrEMBL
  ENSSSCG00070014409 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000007677 ENTREZGENE
  ENSSSCT00000007677.5 UniProtKB/TrEMBL
  ENSSSCT00005004860.1 UniProtKB/TrEMBL
  ENSSSCT00015043516.1 UniProtKB/TrEMBL
  ENSSSCT00025041643.1 UniProtKB/TrEMBL
  ENSSSCT00030097682.1 UniProtKB/TrEMBL
  ENSSSCT00035046126.1 UniProtKB/TrEMBL
  ENSSSCT00040102194.1 UniProtKB/TrEMBL
  ENSSSCT00045034746.1 UniProtKB/TrEMBL
  ENSSSCT00050028343.1 UniProtKB/TrEMBL
  ENSSSCT00055011811.1 UniProtKB/TrEMBL
  ENSSSCT00060047940.1 UniProtKB/TrEMBL
  ENSSSCT00065103599.1 UniProtKB/TrEMBL
  ENSSSCT00070028288.1 UniProtKB/TrEMBL
  ENSSSCT00070028295.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Disintegrin_dom UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
KEGG Report ssc:100048948 UniProtKB/TrEMBL
NCBI Gene ADAM3A ENTREZGENE
PANTHER A DISINTEGRIN AND METALLOPEPTIDASE DOMAIN 3 UniProtKB/TrEMBL
  ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF57552 UniProtKB/TrEMBL
UniProt A0A4X1U663_PIG UniProtKB/TrEMBL
  A0A4X1U6T5_PIG UniProtKB/TrEMBL
  A0A8D0I1B1_PIG UniProtKB/TrEMBL
  A0A8D0RUY3_PIG UniProtKB/TrEMBL
  A0A8D0U1A1_PIG UniProtKB/TrEMBL
  A0A8D0Y612_PIG UniProtKB/TrEMBL
  A0A8D1G7K8_PIG UniProtKB/TrEMBL
  A0A8D1PP59_PIG UniProtKB/TrEMBL
  A0A8D1V8V9_PIG UniProtKB/TrEMBL
  A0A8D2CHJ0 ENTREZGENE, UniProtKB/TrEMBL
  A5A4F6 ENTREZGENE, UniProtKB/TrEMBL
  F1SE42_PIG UniProtKB/TrEMBL