IFITM1 (interferon-induced transmembrane protein 1) - Rat Genome Database

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Gene: IFITM1 (interferon-induced transmembrane protein 1) Sus scrofa
Analyze
No known orthologs.
Symbol: IFITM1
Name: interferon-induced transmembrane protein 1
RGD ID: 13993415
Description: INVOLVED IN defense response to virus (inferred); negative regulation of viral entry into host cell (inferred); negative regulation of viral genome replication (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interferon induced transmembrane protein 1 (9-27)
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.12124,095 - 125,495 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22162,099,157 - 162,100,559 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

References
Additional References at PubMed
PMID:20064371   PMID:24656980   PMID:25102331   PMID:30032202   PMID:32838949   PMID:38484578  


Genomics

Variants

.
Variants in IFITM1
23 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003124230   ⟹   XP_003124278
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12124,095 - 125,495 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003124278 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ABX75538 (Get FASTA)   NCBI Sequence Viewer  
  AFG25598 (Get FASTA)   NCBI Sequence Viewer  
  AMQ48561 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000030999
  ENSSSCP00000030999.3
  ENSSSCP00000064988.1
  ENSSSCP00070047039.1
Reference Protein Sequences
RefSeq Acc Id: XP_003124278   ⟸   XM_003124230
- UniProtKB: A9QW81 (UniProtKB/TrEMBL),   A0A142EGG5 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000060622 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070027629 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000035772 ENTREZGENE
  ENSSSCT00000035772.4 UniProtKB/TrEMBL
  ENSSSCT00000088127.2 UniProtKB/TrEMBL
  ENSSSCT00070055401.1 UniProtKB/TrEMBL
InterPro CD225/Dispanin_fam UniProtKB/TrEMBL
KEGG Report ssc:100127358 UniProtKB/TrEMBL
NCBI Gene IFITM1 ENTREZGENE
PANTHER INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN UniProtKB/TrEMBL
  INTERFERON-INDUCED TRANSMEMBRANE PROTEIN 3 UniProtKB/TrEMBL
Pfam CD225 UniProtKB/TrEMBL
UniProt A0A142EGG5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VY87_PIG UniProtKB/TrEMBL
  A0A5G2QKE0_PIG UniProtKB/TrEMBL
  A9QW81 ENTREZGENE, UniProtKB/TrEMBL
  K7GSV9_PIG UniProtKB/TrEMBL