QNG1 (Q-nucleotide N-glycosylase 1) - Rat Genome Database

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Gene: QNG1 (Q-nucleotide N-glycosylase 1) Sus scrofa
Analyze
Symbol: QNG1
Name: Q-nucleotide N-glycosylase 1
RGD ID: 13979957
Description: ENCODES a protein that exhibits hydrolase activity (inferred); INVOLVED IN nucleoside salvage (inferred); tRNA-guanine transglycosylation (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C10H9orf64; chromosome 10 C9orf64 homolog; UPF0553 protein C9orf64 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1031,001,005 - 31,016,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11031,000,959 - 31,011,431 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21035,066,634 - 35,077,300 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
QNG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1031,001,005 - 31,016,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11031,000,959 - 31,011,431 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21035,066,634 - 35,077,300 (-)NCBISscrofa10.2Sscrofa10.2susScr3
QNG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38983,938,311 - 83,956,986 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl983,938,311 - 83,956,986 (-)EnsemblGRCh38hg38GRCh38
GRCh37986,553,226 - 86,571,901 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36985,743,046 - 85,761,483 (-)NCBINCBI36Build 36hg18NCBI36
Build 34983,782,782 - 83,801,455NCBI
Celera957,124,248 - 57,142,674 (-)NCBICelera
Cytogenetic Map9q21.32NCBI
HuRef956,378,909 - 56,397,294 (-)NCBIHuRef
CHM1_1986,699,916 - 86,718,354 (-)NCBICHM1_1
T2T-CHM13v2.0996,088,591 - 96,107,266 (-)NCBIT2T-CHM13v2.0
Qng1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391358,527,860 - 58,533,039 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1358,527,631 - 58,533,039 (-)EnsemblGRCm39 Ensembl
GRCm381358,380,046 - 58,385,225 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1358,379,817 - 58,385,225 (-)EnsemblGRCm38mm10GRCm38
MGSCv371358,481,407 - 58,486,586 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1359,442,408 - 59,447,588 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1331.04NCBI
Qng1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8176,286,801 - 6,294,400 (+)NCBIGRCr8
mRatBN7.2176,281,377 - 6,288,976 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl176,281,400 - 6,288,975 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx176,304,129 - 6,311,726 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0177,837,472 - 7,844,364 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0176,300,502 - 6,308,103 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0176,683,152 - 6,690,724 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl176,683,152 - 6,690,723 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0178,887,525 - 8,895,097 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41712,212,222 - 12,219,878 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11712,212,215 - 12,218,802 (+)NCBI
Celera176,391,119 - 6,398,686 (+)NCBICelera
Cytogenetic Map17p14NCBI
Qng1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554323,273,161 - 3,288,035 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554323,273,161 - 3,284,261 (+)NCBIChiLan1.0ChiLan1.0
QNG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21183,097,251 - 83,115,894 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1983,103,194 - 83,121,833 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0940,921,349 - 40,940,380 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1983,294,908 - 83,313,024 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl983,294,908 - 83,312,792 (-)Ensemblpanpan1.1panPan2
QNG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1175,526,468 - 75,538,740 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl175,526,674 - 75,538,381 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,176,386 - 76,188,637 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0175,827,816 - 75,840,080 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl175,827,783 - 75,840,073 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1175,641,751 - 75,654,004 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0175,404,593 - 75,416,857 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,107,462 - 76,119,721 (+)NCBIUU_Cfam_GSD_1.0
Qng1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947122,205,562 - 122,213,890 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936828810,088 - 819,675 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936828810,332 - 820,018 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
QNG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11294,750,924 - 94,767,092 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1294,749,789 - 94,766,914 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603883,168,788 - 83,185,597 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Qng1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248097,506,605 - 7,525,788 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248097,508,683 - 7,525,983 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in QNG1
205 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 3 3 3 1 2 1
Low 8 4 2 2 20 1 1 2
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000065105   ⟹   ENSSSCP00000033790
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1031,001,011 - 31,016,753 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000077729   ⟹   ENSSSCP00000064886
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1031,001,005 - 31,011,442 (+)Ensembl
RefSeq Acc Id: XM_003357707   ⟹   XP_003357755
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11031,000,981 - 31,011,431 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064651   ⟹   XP_020920310
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11031,000,959 - 31,011,431 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064652   ⟹   XP_020920311
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11031,001,012 - 31,011,431 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020920310   ⟸   XM_021064651
- Peptide Label: isoform X1
- UniProtKB: A0A286ZQB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003357755   ⟸   XM_003357707
- Peptide Label: isoform X2
- UniProtKB: A0A480Y9B4 (UniProtKB/TrEMBL),   A0A8D1A278 (UniProtKB/TrEMBL),   A0A4X1UWH4 (UniProtKB/TrEMBL),   A0A8D0IPD9 (UniProtKB/TrEMBL),   A0A8D0RWJ2 (UniProtKB/TrEMBL),   A0A8D1DP78 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920311   ⟸   XM_021064652
- Peptide Label: isoform X1
- UniProtKB: A0A286ZQB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000033790   ⟸   ENSSSCT00000065105
RefSeq Acc Id: ENSSSCP00000064886   ⟸   ENSSSCT00000077729


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000034203 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005012364 UniProtKB/TrEMBL
  ENSSSCG00015014561 UniProtKB/TrEMBL
  ENSSSCG00025039317 UniProtKB/TrEMBL
  ENSSSCG00030069220 UniProtKB/TrEMBL
  ENSSSCG00035043105 UniProtKB/TrEMBL
  ENSSSCG00040016696 UniProtKB/TrEMBL
  ENSSSCG00045020675 UniProtKB/TrEMBL
  ENSSSCG00050033934 UniProtKB/TrEMBL
  ENSSSCG00055014127 UniProtKB/TrEMBL
  ENSSSCG00060022943 UniProtKB/TrEMBL
  ENSSSCG00065010297 UniProtKB/TrEMBL
  ENSSSCG00070019926 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000065105 ENTREZGENE
  ENSSSCT00000065105.3 UniProtKB/TrEMBL
  ENSSSCT00000077729 ENTREZGENE
  ENSSSCT00000077729.2 UniProtKB/TrEMBL
  ENSSSCT00005019272.1 UniProtKB/TrEMBL
  ENSSSCT00015019320.1 UniProtKB/TrEMBL
  ENSSSCT00025053447.1 UniProtKB/TrEMBL
  ENSSSCT00030096900.1 UniProtKB/TrEMBL
  ENSSSCT00035057279.1 UniProtKB/TrEMBL
  ENSSSCT00040022510.1 UniProtKB/TrEMBL
  ENSSSCT00045035354.1 UniProtKB/TrEMBL
  ENSSSCT00050045490.1 UniProtKB/TrEMBL
  ENSSSCT00055027942.1 UniProtKB/TrEMBL
  ENSSSCT00060031146.1 UniProtKB/TrEMBL
  ENSSSCT00065013687.1 UniProtKB/TrEMBL
  ENSSSCT00070039513.1 UniProtKB/TrEMBL
InterPro Q_salvage UniProtKB/TrEMBL
NCBI Gene C10H9orf64 ENTREZGENE
PANTHER PTHR21314 UniProtKB/TrEMBL
  QUEUOSINE SALVAGE PROTEIN UniProtKB/TrEMBL
Pfam Q_salvage UniProtKB/TrEMBL
UniProt A0A286ZQB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A480Y9B4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UWH4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0IPD9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0RWJ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1A278 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1DP78 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96167 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-01-16 QNG1  Q-nucleotide N-glycosylase 1  C10H9orf64  chromosome 10 C9orf64 homolog  Symbol and/or name change 19259463 PROVISIONAL