MFN1 (mitofusin 1) - Rat Genome Database

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Gene: MFN1 (mitofusin 1) Sus scrofa
Analyze
Symbol: MFN1
Name: mitofusin 1
RGD ID: 13956781
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH Acute Heart Injury (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); INTERACTS WITH cadmium atom; cadmium dichloride; deoxynivalenol
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: mitochondrial mitofusin 1; mitofusin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13117,404,699 - 117,442,481 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113117,404,637 - 117,441,750 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MFN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13117,404,699 - 117,442,481 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113117,404,637 - 117,441,750 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MFN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383179,347,709 - 179,394,936 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3179,347,709 - 179,394,936 (+)EnsemblGRCh38hg38GRCh38
GRCh373179,065,497 - 179,112,724 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363180,548,174 - 180,593,708 (+)NCBINCBI36Build 36hg18NCBI36
Build 343180,548,181 - 180,593,708NCBI
Celera3177,496,491 - 177,542,028 (+)NCBICelera
Cytogenetic Map3q26.33NCBI
HuRef3176,468,758 - 176,514,186 (+)NCBIHuRef
CHM1_13179,028,464 - 179,074,130 (+)NCBICHM1_1
T2T-CHM13v2.03182,151,549 - 182,198,775 (+)NCBIT2T-CHM13v2.0
Mfn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39332,583,594 - 32,633,384 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl332,583,614 - 32,633,388 (+)EnsemblGRCm39 Ensembl
GRCm38332,529,443 - 32,579,225 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,529,465 - 32,579,239 (+)EnsemblGRCm38mm10GRCm38
MGSCv37332,428,404 - 32,478,147 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36332,721,035 - 32,769,225 (+)NCBIMGSCv36mm8
Celera332,439,720 - 32,489,477 (+)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.75NCBI
Mfn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82117,240,525 - 117,288,017 (+)NCBIGRCr8
mRatBN7.22115,313,380 - 115,359,651 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2115,313,401 - 115,359,640 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2121,929,637 - 121,971,371 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02120,042,271 - 120,083,997 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02114,743,136 - 114,785,102 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02118,929,738 - 118,971,689 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2118,929,738 - 118,973,698 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02138,586,943 - 138,627,280 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42118,739,155 - 118,783,037 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12118,684,116 - 118,727,999 (+)NCBI
Celera2110,426,431 - 110,467,687 (+)NCBICelera
Cytogenetic Map2q24NCBI
Mfn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554208,541,936 - 8,594,437 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554208,541,547 - 8,596,494 (+)NCBIChiLan1.0ChiLan1.0
MFN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22177,214,053 - 177,261,639 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13177,218,770 - 177,266,371 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03176,378,175 - 176,423,943 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13184,552,108 - 184,596,763 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3184,552,108 - 184,596,763 (+)Ensemblpanpan1.1panPan2
MFN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13412,785,799 - 12,816,881 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3412,785,856 - 12,815,994 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3416,928,972 - 16,960,993 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03412,682,636 - 12,715,445 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3412,682,734 - 12,758,148 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13412,735,233 - 12,767,211 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03412,717,513 - 12,749,787 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03412,956,997 - 12,989,281 (+)NCBIUU_Cfam_GSD_1.0
Mfn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602109,444,823 - 109,485,343 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365663,737,315 - 3,775,693 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365663,737,315 - 3,775,894 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MFN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11510,050,616 - 10,093,118 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1510,047,599 - 10,093,126 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606318,929,780 - 18,974,669 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mfn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473057,110,807 - 57,153,989 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473057,110,669 - 57,154,924 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MFN1
301 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 4 3 5 2 23 2 3 3
Low
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000039446   ⟹   ENSSSCP00000038468
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13117,404,699 - 117,442,481 (+)Ensembl
RefSeq Acc Id: NM_001315732   ⟹   NP_001302661
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113117,406,037 - 117,439,730 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021068493   ⟹   XP_020924152
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113117,404,637 - 117,441,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021068494   ⟹   XP_020924153
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113117,404,820 - 117,441,743 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020924152   ⟸   XM_021068493
- Peptide Label: isoform X1
- UniProtKB: A0A4X1V3E6 (UniProtKB/TrEMBL),   M3VH65 (UniProtKB/TrEMBL),   A0A8D0W9C7 (UniProtKB/TrEMBL),   A0A8D1Z4U4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924153   ⟸   XM_021068494
- Peptide Label: isoform X1
- UniProtKB: A0A4X1V3E6 (UniProtKB/TrEMBL),   M3VH65 (UniProtKB/TrEMBL),   A0A8D0W9C7 (UniProtKB/TrEMBL),   A0A8D1Z4U4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001302661   ⟸   NM_001315732
- UniProtKB: M3VH65 (UniProtKB/TrEMBL),   A0A4X1V3E6 (UniProtKB/TrEMBL),   A0A8D0W9C7 (UniProtKB/TrEMBL),   A0A8D1Z4U4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000038468   ⟸   ENSSSCT00000039446
Protein Domains
Dynamin-type G


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000039285 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005011130 UniProtKB/TrEMBL
  ENSSSCG00015054827 UniProtKB/TrEMBL
  ENSSSCG00025067353 UniProtKB/TrEMBL
  ENSSSCG00030027311 UniProtKB/TrEMBL
  ENSSSCG00035017101 UniProtKB/TrEMBL
  ENSSSCG00040006358 UniProtKB/TrEMBL
  ENSSSCG00045012347 UniProtKB/TrEMBL
  ENSSSCG00050022646 UniProtKB/TrEMBL
  ENSSSCG00055013160 UniProtKB/TrEMBL
  ENSSSCG00060062820 UniProtKB/TrEMBL
  ENSSSCG00065053415 UniProtKB/TrEMBL
  ENSSSCG00070021601 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000039446 ENTREZGENE
  ENSSSCT00000039446.2 UniProtKB/TrEMBL
  ENSSSCT00005017499.1 UniProtKB/TrEMBL
  ENSSSCT00005017541.1 UniProtKB/TrEMBL
  ENSSSCT00015073139.1 UniProtKB/TrEMBL
  ENSSSCT00025092545.1 UniProtKB/TrEMBL
  ENSSSCT00030038221.1 UniProtKB/TrEMBL
  ENSSSCT00035021940.1 UniProtKB/TrEMBL
  ENSSSCT00040008378.1 UniProtKB/TrEMBL
  ENSSSCT00045021017.1 UniProtKB/TrEMBL
  ENSSSCT00050030571.1 UniProtKB/TrEMBL
  ENSSSCT00055025942.1 UniProtKB/TrEMBL
  ENSSSCT00060085714.1 UniProtKB/TrEMBL
  ENSSSCT00065073155.1 UniProtKB/TrEMBL
  ENSSSCT00070042943.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.110 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro Dynamin_N UniProtKB/TrEMBL
  Fzo/mitofusin_HR2 UniProtKB/TrEMBL
  G_DYNAMIN_dom UniProtKB/TrEMBL
  Mitofusin_fam UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report ssc:100627612 UniProtKB/TrEMBL
NCBI Gene MFN1 ENTREZGENE
PANTHER PTHR10465 UniProtKB/TrEMBL
  PTHR10465:SF2 UniProtKB/TrEMBL
Pfam Dynamin_N UniProtKB/TrEMBL
  Fzo_mitofusin UniProtKB/TrEMBL
PROSITE G_DYNAMIN_2 UniProtKB/TrEMBL
Superfamily-SCOP Fzo-like conserved region UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A4X1V3E6 ENTREZGENE
  A0A8D0W9C7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1Z4U4 ENTREZGENE, UniProtKB/TrEMBL
  M3VH65 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A4X1V3E6 UniProtKB/TrEMBL
VGNC ID VGNC:90178 ENTREZGENE