EMC4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 80,265,446 - 80,270,691 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 80,266,001 - 80,270,691 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 86,263,162 - 86,267,852 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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EMC4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 34,225,016 - 34,230,156 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 34,225,013 - 34,230,156 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 34,517,217 - 34,522,357 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 32,304,537 - 32,309,649 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 15 | 11,319,812 - 11,324,924 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q14 | NCBI | | | | | HuRef | 15 | 11,380,729 - 11,385,840 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 34,635,273 - 34,640,385 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 32,023,277 - 32,028,416 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Emc4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 112,193,349 - 112,209,532 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 112,193,356 - 112,198,372 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 112,363,019 - 112,379,476 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 112,363,011 - 112,368,027 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 112,203,176 - 112,208,184 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 112,163,858 - 112,168,866 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 113,513,993 - 113,519,001 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E3 | NCBI | | | | | cM Map | 2 | 57.02 | NCBI | | | | |
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Emc4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 119,624,100 - 119,633,170 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 99,169,711 - 99,174,730 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 99,169,711 - 99,174,729 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 102,798,035 - 102,803,051 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 111,397,034 - 111,402,050 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 109,092,158 - 109,097,176 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 103,852,139 - 103,857,172 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 103,852,139 - 103,857,158 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 110,445,980 - 110,451,002 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 98,211,695 - 98,216,715 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 98,108,857 - 98,113,032 (-) | NCBI | | | | | Celera | 3 | 98,155,188 - 98,160,206 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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Emc4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955416 | 375,736 - 380,846 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 375,736 - 380,825 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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EMC4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 22,992,823 - 23,012,396 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 27,714,590 - 27,734,013 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 12,734,031 - 12,739,345 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 31,568,617 - 31,573,556 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 31,568,622 - 31,573,547 (+) | Ensembl | panpan1.1 | | panPan2 | |
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EMC4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 860,769 - 865,211 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 861,022 - 865,196 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 905,197 - 909,647 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 956,905 - 961,355 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 957,158 - 961,332 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 905,156 - 909,605 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 1,004,166 - 1,008,616 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 1,131,781 - 1,136,231 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Emc4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 79,401,600 - 79,428,268 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936673 | 2,723,322 - 2,732,305 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936673 | 2,723,563 - 2,732,164 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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EMC4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 26 | 48,673,792 - 48,678,869 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 48,674,134 - 48,678,862 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 92,223,931 - 92,229,873 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Emc4 (Heterocephalus glaber - naked mole-rat) |
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