GCAT (glycine C-acetyltransferase)

Gene: GCAT (glycine C-acetyltransferase) Sus scrofa

Analyze

Symbol:

GCAT

Name:

glycine C-acetyltransferase

RGD ID:

13936042

Description:

ENCODES a protein that exhibits acyltransferase activity (inferred); glycine C-acetyltransferase activity (inferred); ligase activity (inferred); INVOLVED IN biosynthetic process (inferred); threonine catabolic process (inferred); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (inferred); nuclear speck (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	10,027,044 - 10,038,433 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	10,027,133 - 10,038,494 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	7,426,530 - 7,437,953 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

myoclonic dystonia 26 (ISO)

neurodegeneration with brain iron accumulation 2A (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biosynthetic process (IEA)

threonine catabolic process (IEA)

Cellular Component

mitochondrion (IBA,IEA)

nuclear speck (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

acyltransferase activity (IEA)

glycine C-acetyltransferase activity (IEA)

ligase activity (IEA)

pyridoxal phosphate binding (IEA)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

dihydropyrimidine dehydrogenase deficiency pathway (ISO)

dimethylglycine dehydrogenase deficiency pathway (ISO)

nonketotic hyperglycinemia pathway (ISO)

sarcosinemia pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:22301074

Genomics

Comparative Map Data

GCAT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	10,027,044 - 10,038,433 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	10,027,133 - 10,038,494 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	7,426,530 - 7,437,953 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GCAT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	37,807,934 - 37,817,183 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	37,807,905 - 37,817,176 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	38,203,941 - 38,213,190 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	36,533,901 - 36,542,850 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	36,528,454 - 36,537,403	NCBI
Celera	22	22,005,704 - 22,014,976 (+)	NCBI		Celera
Cytogenetic Map	22	q13.1	NCBI
HuRef	22	21,170,909 - 21,180,178 (+)	NCBI		HuRef
CHM1_1	22	38,162,662 - 38,171,933 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	38,269,561 - 38,278,815 (+)	NCBI		T2T-CHM13v2.0

Gcat
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	78,915,074 - 78,926,731 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	78,915,074 - 78,922,553 (+)	Ensembl		GRCm39 Ensembl
GRCm39 Ensembl	15	78,915,101 - 78,926,731 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	79,030,874 - 79,042,531 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	79,030,874 - 79,038,353 (+)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	15	79,030,901 - 79,042,531 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	78,861,304 - 78,872,961 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	78,858,175 - 78,865,609 (+)	NCBI		MGSCv36	mm8
Celera	15	81,132,500 - 81,144,160 (+)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	37.7	NCBI

Gcat
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	112,475,572 - 112,481,920 (+)	NCBI		GRCr8
mRatBN7.2	7	110,595,126 - 110,601,474 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	110,595,091 - 110,601,473 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	112,344,758 - 112,350,975 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	114,568,289 - 114,574,506 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	114,536,921 - 114,543,140 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	120,263,068 - 120,269,365 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	120,263,054 - 120,269,451 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	120,254,453 - 120,290,686 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	117,003,626 - 117,010,396 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	117,037,855 - 117,044,625 (+)	NCBI
Celera	7	106,929,404 - 106,935,689 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Gcat
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	24,184,997 - 24,192,229 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	24,184,997 - 24,192,178 (+)	NCBI	ChiLan1.0	ChiLan1.0

GCAT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	47,666,252 - 47,675,318 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	50,354,605 - 50,363,681 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	18,722,886 - 18,731,963 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	36,554,050 - 36,563,429 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	36,554,067 - 36,563,429 (+)	Ensembl	panpan1.1		panPan2

GCAT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	26,821,121 - 26,827,496 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	26,821,027 - 26,827,707 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	26,775,846 - 26,782,054 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	27,612,460 - 27,618,671 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	27,605,669 - 27,619,049 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	27,335,676 - 27,341,859 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	27,644,101 - 27,650,310 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	27,821,320 - 27,827,528 (-)	NCBI		UU_Cfam_GSD_1.0

Gcat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	10,296,601 - 10,303,032 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	3,304,031 - 3,313,475 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	3,307,015 - 3,313,441 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GCAT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	20,508,082 - 20,516,911 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	20,508,506 - 20,516,732 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	105,275,789 - 105,285,784 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gcat
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	10,089,827 - 10,103,515 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	10,095,979 - 10,103,442 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GCAT
307 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium							2
Low	9	3	3	3	2	23		2
Below cutoff	1	1		2				1	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003126033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013997525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK235781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP326744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000000128 ⟹ ENSSSCP00000000126

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,031,293 - 10,038,433 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000069168 ⟹ ENSSSCP00000063354

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,027,044 - 10,038,427 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000079153 ⟹ ENSSSCP00000072377

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,030,396 - 10,038,428 (-)	Ensembl

RefSeq Acc Id:

XM_003126033 ⟹ XP_003126081

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,031,225 - 10,038,494 (-)	NCBI

Sequence:

show sequence

GGGGCCCAGCCCCCGCCACGTGATCAGGCGGGGGTCTCCGTGCGTACAGCCCGCAGCGGGCAGG
CGCGCTCCGGCGAGGTGGACGCGATGTGGGCCGGCCGCATCCTCTGCGCTGCCCTCTCCCGGGC
CCCCCGCGGCTGTCGCCCGCAGTCAGCGCTGGCTCAGCTGCGTGGCATTCTGGAGGAGGAGCTG
GAAGGCATCCGCGAGGCTGGCACCTGGAAAAGCGAGCGGGTCATCACGTCCCGTCAGGGGCCGC
GCATACACGTGGACGGCGTCTCGGGAGGAATCATTAACTTCTGTGCCAACAACTACCTGGGCCT
GAGCAGCCACCCCGAGGTGATCCAGGCAGGTCTGCAGGCCCTGGAGGAGTTTGGAGCCGGCCTT
AGCTCTGTCCGATTCATCTGTGGGACCCAGAGCATCCACAAGGATCTGGAGGCGAAGATCGCCC
GCTTCCACCAGCGGGAGGACGCCATCCTCTACCCCAGCTGTTTTGATGCCAATGCCGGCCTCTT
TGAGGCCCTGCTGACCCCAGAGGACGCGGTCCTGTCGGACGAGCTGAACCATGCCTCCATCATC
GACGGCATCCGTCTGTGCAAGGCCCACAAGTACCGCTACCGCCACTTGGACGTGGCCGATCTGG
AGGCCAAGCTGCAGGAGGCCCAGAAGCATCGACTGCGCCTAGTGGCCACTGATGGGACCTTTTC
CATGGACGGTGACATCGCGCCCCTGCAGGACATCTGCCGCCTTGCCTCTCAATATGGTGCCTTG
GTCTTTGTGGACGATTGCCATGCCACCGGCTTCCTGGGGGCCACTGGACGGGGCACCGATGAGC
TGCTGGGCGTGATGGACCAGGTCGCCATCATCAACTCCACTCTGGGGAAGGCGCTGGGCGGAGC
CTCAGGGGGCTACACGACGGGGCCTGGATCCCTGGTGTCCCTGCTGCGGCAGCGTGCCCGGCCC
TACCTCTTCTCCAACAGCCTGCCACCTGCTGTTGTCGGCTGTGCCTCCAAGGCCCTGGACCTGC
TCATGGAGAACAACGCCATCGTCCAGTCTATGGCAGCCAAGACCCAGCGATTCCGCAGGAAGAT
GGAGGCTGCCGGCTTCACCATCTCAGGAGCCAATCACCCCATCTGCCCTGTGATGCTGGGTGAT
GCTCGGCTGGCCTCTTGCATGGCAGATGACATGCAAAAGAGAGGCATCTTTGTCATCGGGTTCA
GCTACCCCGTGGTCCCCAAGGGCAAGGCCCGGATCCGGGTCCAGATCTCAGCCGTGCACAGCGA
GGAGGACATTGACCGCTGCGTGGAGGCCTTCGTGGAGGTGGGGCGGCTGCACGGGGCTCTGCCT
TGAGGCCCAGGGAGTGACAAGCCTCCCAGGGACAAAGGGGCCCTTTGAGCCAGCTCTGAGTTCT
GTCAAAGTCCTGGGGCCAGGCTGGGGCGAGGCCTGTGCTTGTGGCCACAAGTGAAGCAACAGTG
TGGAAATGGCCTGC

hide sequence

RefSeq Acc Id:

XM_013997525 ⟹ XP_013852979

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,027,133 - 10,038,479 (-)	NCBI

Sequence:

show sequence

CCACGTGATCAGGCGGGGGTCTCCGTGCGTACAGCCCGCAGCGGGCAGGCGCGCTCCGGCGAGG
TGGACGCGATGTGGGCCGGCCGCATCCTCTGCGCTGCCCTCTCCCGGGCCCCCCGCGGCTGTCG
CCCGCAGTCAGCGCTGGCTCAGCTGCGTGGCATTCTGGAGGAGGAGCTGGAAGGCATCCGCGAG
GCTGGCACCTGGAAAAGCGAGCGGGTCATCACGTCCCGTCAGGGGCCGCGCATACACGTGGACG
GCGTCTCGGGAGGAATCATTAACTTCTGTGCCAACAACTACCTGGGCCTGAGCAGCCACCCCGA
GGTGATCCAGGCAGGTCTGCAGGCCCTGGAGGAGTTTGGAGCCGGCCTTAGCTCTGTCCGATTC
ATCTGTGGGACCCAGAGCATCCACAAGGATCTGGAGGCGAAGATCGCCCGCTTCCACCAGCGGG
AGGACGCCATCCTCTACCCCAGCTGTTTTGATGCCAATGCCGGCCTCTTTGAGGCCCTGCTGAC
CCCAGAGGACGCGGTCCTGTCGGACGAGCTGAACCATGCCTCCATCATCGACGGCATCCGTCTG
TGCAAGGCCCACAAGTACCGCTACCGCCACTTGGACGTGGCCGATCTGGAGGCCAAGCTGCAGG
AGGCCCAGAAGCATCGACTGCGCCTAGTGGCCACTGATGGGACCTTTTCCATGGACGGTGACAT
CGCGCCCCTGCAGGACATCTGCCGCCTTGCCTCTCAATATGGTGCCTTGGTCTTTGTGGACGAT
TGCCATGCCACCGGCTTCCTGGGGGCCACTGGACGGGGCACCGATGAGCTGCTGGGCGTGATGG
ACCAGGTCGCCATCATCAACTCCACTCTGGGGAAGGCGCTGGGCGGAGCCTCAGGGGGCTACAC
GACGGGGCCTGGATCCCTGGTGTCCCTGCTGCGGCAGCGTGCCCGGCCCTACCTCTTCTCCAAC
AGCCTGCCACCTGCTGTTGTCGGCTGTGCCTCCAAGGCCCTGGACCTGCTCATGGAGAACAACG
CCATCGTCCAGTCTATGGCAGCCAAGACCCAGCGATTCCGCAGGAAGATGGAGGCTGCCGGCTT
CACCATCTCAGGAGCCAATCACCCCATCTGCCCTGTGATGCTGGGTGATGCTCGGCTGGCCTCT
TGCATGGCAGATGACATGCAAAAGAGAGAAAGAGGCAGAAGCAACGCAGAGAGGCAGCGAAGAG
CCAGGCAGAGGAGCATGTCACCTGGGGCAAATCAGGGACTGAGGAGGAGGTGGCTATTTCGGAG
GGAGTGCCCAAGTCTGGCAGAGGAGTGGCCTTAAAGGAGAAGAGGAACCAGTGGGAGGCCAGCC
TGTACCTTCGAGGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003126081	(Get FASTA)	NCBI Sequence Viewer
	XP_013852979	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000000126
	ENSSSCP00000000126.3
	ENSSSCP00000063354
	ENSSSCP00000063354.1
	ENSSSCP00000072377.1
	ENSSSCP00005001558.1
	ENSSSCP00050040219.1
	ENSSSCP00070037876.1
	ENSSSCP00070037960.1

RefSeq Acc Id:	XP_013852979 ⟸ XM_013997525
- Peptide Label:	isoform X2
- UniProtKB:	A0A5G2QGD8 (UniProtKB/TrEMBL), A0A8D1NPX7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWAGRILCAALSRAPRGCRPQSALAQLRGILEEELEGIREAGTWKSERVITSRQGPRIHVDGVS GGIINFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKDLEAKIARFHQREDA ILYPSCFDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDVADLEAKLQEAQ KHRLRLVATDGTFSMDGDIAPLQDICRLASQYGALVFVDDCHATGFLGATGRGTDELLGVMDQV AIINSTLGKALGGASGGYTTGPGSLVSLLRQRARPYLFSNSLPPAVVGCASKALDLLMENNAIV QSMAAKTQRFRRKMEAAGFTISGANHPICPVMLGDARLASCMADDMQKRERGRSNAERQRRARQ RSMSPGANQGLRRRWLFRRECPSLAEEWP hide sequence

RefSeq Acc Id:	XP_003126081 ⟸ XM_003126033
- Peptide Label:	isoform X1
- UniProtKB:	A0A480KFK8 (UniProtKB/TrEMBL), A0A4X1V8K7 (UniProtKB/TrEMBL), A0A8D0HZL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWAGRILCAALSRAPRGCRPQSALAQLRGILEEELEGIREAGTWKSERVITSRQGPRIHVDGVS GGIINFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKDLEAKIARFHQREDA ILYPSCFDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDVADLEAKLQEAQ KHRLRLVATDGTFSMDGDIAPLQDICRLASQYGALVFVDDCHATGFLGATGRGTDELLGVMDQV AIINSTLGKALGGASGGYTTGPGSLVSLLRQRARPYLFSNSLPPAVVGCASKALDLLMENNAIV QSMAAKTQRFRRKMEAAGFTISGANHPICPVMLGDARLASCMADDMQKRGIFVIGFSYPVVPKG KARIRVQISAVHSEEDIDRCVEAFVEVGRLHGALP hide sequence

RefSeq Acc Id:

ENSSSCP00000063354 ⟸ ENSSSCT00000069168

RefSeq Acc Id:

ENSSSCP00000072377 ⟸ ENSSSCT00000079153

RefSeq Acc Id:

ENSSSCP00000000126 ⟸ ENSSSCT00000000128

Protein Domains

Aminotransferase class I/classII

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000029945	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005001802	UniProtKB/TrEMBL
	ENSSSCG00050068316	UniProtKB/TrEMBL
	ENSSSCG00070022580	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000000128	ENTREZGENE
	ENSSSCT00000000128.4	UniProtKB/TrEMBL
	ENSSSCT00000069168	ENTREZGENE
	ENSSSCT00000069168.2	UniProtKB/TrEMBL
	ENSSSCT00000079153.1	UniProtKB/TrEMBL
	ENSSSCT00005002670.1	UniProtKB/TrEMBL
	ENSSSCT00050093218.1	UniProtKB/TrEMBL
	ENSSSCT00070044961.1	UniProtKB/TrEMBL
	ENSSSCT00070045059.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.640.10	UniProtKB/TrEMBL
	3.90.1150.10	UniProtKB/TrEMBL
InterPro	2am3keto_CoA_ligase	UniProtKB/TrEMBL
	Aminotrans_II_pyridoxalP_BS	UniProtKB/TrEMBL
	Aminotransferase_I/II	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_dom1	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major	UniProtKB/TrEMBL
KEGG Report	ssc:100525698	UniProtKB/TrEMBL
NCBI Gene	GCAT	ENTREZGENE
PANTHER	2-AMINO-3-KETOBUTYRATE COENZYME A LIGASE, MITOCHONDRIAL	UniProtKB/TrEMBL
	CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE	UniProtKB/TrEMBL
Pfam	Aminotran_1_2	UniProtKB/TrEMBL
PROSITE	AA_TRANSFER_CLASS_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53383	UniProtKB/TrEMBL
UniProt	A0A480KFK8	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1V8K7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VAX5_PIG	UniProtKB/TrEMBL
	A0A5G2QGD8	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2R5L3_PIG	UniProtKB/TrEMBL
	A0A8D0HZL5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1NPX7	ENTREZGENE, UniProtKB/TrEMBL
	F1SKL8_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:88378	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB