LOC100737613 (olfactory receptor 2G2-like)

Gene: LOC100737613 (olfactory receptor 2G2-like) Sus scrofa

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Symbol:

LOC100737613 (Ensembl: OR2G2)

Name:

olfactory receptor 2G2-like (Ensembl:olfactory receptor family 2 subfamily G member 2)

RGD ID:

13907294

Description:

ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); ASSOCIATED WITH Cryopyrin-Associated Periodic Syndromes (ortholog); developmental and epileptic encephalopathy 54 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	56,631,761 - 56,632,714 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	56,631,761 - 56,632,714 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	57,535,080 - 57,536,033 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cryopyrin-Associated Periodic Syndromes (ISO)

developmental and epileptic encephalopathy 54 (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

detection of chemical stimulus involved in sensory perception of smell (IEA)

G protein-coupled receptor signaling pathway (IEA)

sensory perception of smell (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

olfactory receptor activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

LOC100737613
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	56,631,761 - 56,632,714 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	56,631,761 - 56,632,714 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	57,535,080 - 57,536,033 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OR2G2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	247,588,360 - 247,589,313 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	247,588,360 - 247,589,313 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	247,751,662 - 247,752,615 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	245,818,285 - 245,819,238 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	244,077,702 - 244,078,656	NCBI
Celera	1	221,050,459 - 221,051,412 (+)	NCBI		Celera
Cytogenetic Map	1	q44	NCBI
HuRef	1	218,145,823 - 218,146,776 (+)	NCBI		HuRef
CHM1_1	1	249,024,020 - 249,024,973 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	247,025,203 - 247,026,156 (+)	NCBI		T2T-CHM13v2.0

Or2y1h
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	34,110,628 - 34,111,563 (+)	NCBI		GRCr8
mRatBN7.2	10	33,609,511 - 33,610,446 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	33,604,013 - 33,612,206 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	38,295,041 - 38,295,976 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	6,833,451 - 6,834,386 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	33,288,678 - 33,289,613 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	34,564,009 - 34,564,944 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	34,564,009 - 34,564,944 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	34,340,398 - 34,341,333 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	34,751,127 - 34,752,062 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	34,752,175 - 34,753,111 (+)	NCBI
Celera	10	32,989,157 - 32,990,092 (+)	NCBI		Celera
Cytogenetic Map	10	q21	NCBI

LOC100981404
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	1,468,641 - 1,469,594 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	1,742,605 - 1,743,558 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	223,222,012 - 223,222,965 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	228,673,918 - 228,674,871 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

LOC103230935
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	84,629,044 - 84,631,540 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666055	87,044,902 - 87,045,971 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in LOC100737613
14 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003480746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000015231 ⟹ ENSSSCP00000014825

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	56,631,761 - 56,632,714 (-)	Ensembl

RefSeq Acc Id:

XM_003480746 ⟹ XP_003480794

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	56,631,761 - 56,632,714 (-)	NCBI

Sequence:

show sequence

ATGGGGATGGTGAGAAGTACCTATGAGGGTAATATAACAGGTTTTATCCTGTTAGGGTTTTCTG
ATTATCCTCAGTTACAGAAGGTTCTATTTGTGGTCATCTTGATCTCATATTTACTAACCATTCT
GGGGAACACCACTATCATTCTGATATCTCATCTGGAACCCAAGCTTCATACACCAATGTATTTC
TTCCTTTCTCATCTCTCCTTCCTGGACCTCTGCTTTACCAGCAGTGTTATTCCACAGCTCTTGG
TAAACTTGTGGGATCCCATGAAAACCATCACCTATGGTGGCTGTGTAGTTCAGCTATATGTCTC
TCATGCCCTTGGAGCTACTGAGTGTGTTCTCCTGGCTGTGATGTCCTATGATCGCTATGTGGCC
ATCTGCCGTCCCCTCCAATACACTCTTTTAATGCATCCCCATCTCTGCATGGCCCTGACATTTT
TGGCGTGGCTTAGTGGGGTGGCCACCACCCTGGTACAGTCCACTCTCACCCTACAGCTACCTTT
CTGTGGGCATAACCAAGTGGATCATTTTATCTGTGAGGTCCCTGTACTCATCAAGTTGGCTTGT
GTGGATACCACTTTCAATGAAGCTGAGCTCTTTGTGGCTAGTATCCTCTTCCTTATAGTGCCTG
TCTCCTTCATCTTGGTCTCCTATGGCTACATTGTCCAAGCAGTTTTGAAGATCAAGTCAGCTAC
TGGAAGAAAGAAAGTGTTTGGGACTTGCTCTTCCCATGTTACAGTTGTCATCATTTTCTATGGA
ACCATTATGTTCATGTATCTACAGTCAGCCAAGAGTACATACAAGGACCAGGGGAAGTTTGTCT
CTCTCTTTTATACTGTGGTGACCCCCATGCTGAATCCTCTTATCTATACTTTGAGGAACAAAGA
GGTTAAAGGGGCACTGTGGAAAGTTCTAAGGAAGATTCTAGTAGTAAGTATTACATGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003480794	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000014825
	ENSSSCP00000014825.2
	ENSSSCP00005041580.1
	ENSSSCP00015025671.1
	ENSSSCP00025021943.1
	ENSSSCP00030018484.1
	ENSSSCP00035031743.1
	ENSSSCP00040011953.1
	ENSSSCP00045000205.1
	ENSSSCP00050037162.1
	ENSSSCP00055037600.1
	ENSSSCP00060013011.1
	ENSSSCP00065020722.1
	ENSSSCP00070021754.1

RefSeq Acc Id:

XP_003480794 ⟸ XM_003480746

- UniProtKB:

F1S6N2 (UniProtKB/TrEMBL), A0A4X1TWI5 (UniProtKB/TrEMBL), A0A8D0KLC2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGMVRSTYEGNITGFILLGFSDYPQLQKVLFVVILISYLLTILGNTTIILISHLEPKLHTPMYF
FLSHLSFLDLCFTSSVIPQLLVNLWDPMKTITYGGCVVQLYVSHALGATECVLLAVMSYDRYVA
ICRPLQYTLLMHPHLCMALTFLAWLSGVATTLVQSTLTLQLPFCGHNQVDHFICEVPVLIKLAC
VDTTFNEAELFVASILFLIVPVSFILVSYGYIVQAVLKIKSATGRKKVFGTCSSHVTVVIIFYG
TIMFMYLQSAKSTYKDQGKFVSLFYTVVTPMLNPLIYTLRNKEVKGALWKVLRKILVVSIT

hide sequence

RefSeq Acc Id:

ENSSSCP00000014825 ⟸ ENSSSCT00000015231

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013945	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005041791	UniProtKB/TrEMBL
	ENSSSCG00015048195	UniProtKB/TrEMBL
	ENSSSCG00025037842	UniProtKB/TrEMBL
	ENSSSCG00030028895	UniProtKB/TrEMBL
	ENSSSCG00035057975	UniProtKB/TrEMBL
	ENSSSCG00040021143	UniProtKB/TrEMBL
	ENSSSCG00045000332	UniProtKB/TrEMBL
	ENSSSCG00050063619	UniProtKB/TrEMBL
	ENSSSCG00055023930	UniProtKB/TrEMBL
	ENSSSCG00060022340	UniProtKB/TrEMBL
	ENSSSCG00065035299	UniProtKB/TrEMBL
	ENSSSCG00070013438	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000015231	ENTREZGENE
	ENSSSCT00000015231.4	UniProtKB/TrEMBL
	ENSSSCT00005066984.1	UniProtKB/TrEMBL
	ENSSSCT00015064147.1	UniProtKB/TrEMBL
	ENSSSCT00025051442.1	UniProtKB/TrEMBL
	ENSSSCT00030040318.1	UniProtKB/TrEMBL
	ENSSSCT00035077560.1	UniProtKB/TrEMBL
	ENSSSCT00040028427.1	UniProtKB/TrEMBL
	ENSSSCT00045000413.1	UniProtKB/TrEMBL
	ENSSSCT00050086612.1	UniProtKB/TrEMBL
	ENSSSCT00055047127.1	UniProtKB/TrEMBL
	ENSSSCT00060030311.1	UniProtKB/TrEMBL
	ENSSSCT00065048068.1	UniProtKB/TrEMBL
	ENSSSCT00070026207.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Olfact_rcpt	UniProtKB/TrEMBL
KEGG Report	ssc:100737613	UniProtKB/TrEMBL
NCBI Gene	LOC100737613	ENTREZGENE
PANTHER	OLFACTORY RECEPTOR	UniProtKB/TrEMBL
	OLFACTORY RECEPTOR 2G2	UniProtKB/TrEMBL
Pfam	7tm_4	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	OLFACTORYR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A4X1TWI5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0KLC2	ENTREZGENE, UniProtKB/TrEMBL
	F1S6N2	ENTREZGENE
UniProt Secondary	F1S6N2	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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