ZDHHC1 (zinc finger DHHC-type containing 1)

Gene: ZDHHC1 (zinc finger DHHC-type containing 1) Sus scrofa

Analyze

Symbol:

ZDHHC1

Name:

zinc finger DHHC-type containing 1

RGD ID:

13859017

Description:

ENCODES a protein that exhibits acyltransferase activity (inferred); palmitoyltransferase activity (inferred); protein-cysteine S-palmitoyltransferase activity (inferred); INVOLVED IN antiviral innate immune response (inferred); positive regulation of defense response to virus by host (inferred); positive regulation of protein localization to endosome (inferred); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

probable palmitoyltransferase ZDHHC1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	28,049,949 - 28,071,540 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	28,046,099 - 28,071,535 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,317,029 - 25,338,632 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antiviral innate immune response (IEA)

positive regulation of defense response to virus by host (IEA)

positive regulation of protein localization to endosome (IEA)

positive regulation of protein oligomerization (IEA)

protein targeting to membrane (IBA,IEA)

Cellular Component

endoplasmic reticulum (IBA,IEA)

endoplasmic reticulum membrane (ISO)

endosome membrane (IEA)

Golgi apparatus (IBA,IEA)

membrane (IEA)

Molecular Function

acyltransferase activity (IEA)

palmitoyltransferase activity (IEA)

protein binding (ISO)

protein-cysteine S-palmitoyltransferase activity (IBA,IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

ZDHHC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	28,049,949 - 28,071,540 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	28,046,099 - 28,071,535 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,317,029 - 25,338,632 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZDHHC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	67,394,152 - 67,416,477 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	67,394,152 - 67,416,833 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	67,428,055 - 67,450,380 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	65,985,829 - 66,007,878 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	65,985,828 - 66,007,878	NCBI
Celera	16	51,936,522 - 51,958,539 (-)	NCBI		Celera
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	53,301,558 - 53,323,519 (-)	NCBI		HuRef
CHM1_1	16	68,835,705 - 68,857,722 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	73,188,923 - 73,211,253 (-)	NCBI		T2T-CHM13v2.0

Zdhhc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,199,055 - 106,223,694 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	106,199,055 - 106,223,534 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	105,472,419 - 105,497,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	105,472,423 - 105,496,902 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	107,996,325 - 108,020,770 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	108,361,554 - 108,385,999 (-)	NCBI		MGSCv36	mm8
Celera	8	109,695,617 - 109,720,060 (-)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	53.04	NCBI

Zdhhc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	50,260,445 - 50,285,634 (-)	NCBI		GRCr8
mRatBN7.2	19	33,350,533 - 33,375,717 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	33,350,533 - 33,375,616 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	40,166,123 - 40,191,049 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	40,819,451 - 40,844,381 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	43,110,095 - 43,142,033 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	37,428,959 - 37,454,150 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	37,428,959 - 37,454,040 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	48,294,576 - 48,319,729 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,288,675 - 35,314,178 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	19	32,778,838 - 32,803,771 (-)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Zdhhc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,234,319 - 9,245,894 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,224,559 - 9,245,894 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZDHHC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	76,924,075 - 76,946,138 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	82,836,755 - 82,858,767 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	47,739,857 - 47,761,887 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	67,129,090 - 67,150,646 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	67,129,091 - 67,142,001 (-)	Ensembl	panpan1.1		panPan2

ZDHHC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	81,985,974 - 82,006,877 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	81,985,998 - 82,006,885 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	81,975,651 - 81,996,458 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	82,421,311 - 82,442,105 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	82,421,230 - 82,442,095 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	82,247,436 - 82,268,237 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	81,928,559 - 81,949,345 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	82,571,977 - 82,592,795 (+)	NCBI		UU_Cfam_GSD_1.0

Zdhhc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	41,719,938 - 41,739,343 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	17,849,802 - 17,861,465 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	17,849,772 - 17,869,140 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZDHHC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	60,040,264 - 60,062,531 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	60,040,266 - 60,062,548 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	22,789,567 - 22,811,886 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zdhhc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	18,901,589 - 18,922,066 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	18,901,622 - 18,921,798 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ZDHHC1
341 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	3	2	3	2	2	19	2	2	1
Below cutoff	5	2		3		4		1	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013998265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK240395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK350006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU929737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01017964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000003076 ⟹ ENSSSCP00000002997

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	28,049,949 - 28,071,540 (-)	Ensembl

RefSeq Acc Id:

XM_013998265 ⟹ XP_013853719

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	28,046,099 - 28,071,535 (-)	NCBI

Sequence:

show sequence

CAGGGGAACAGGCCCATCGCCGGACGAGGCCCAGCCCGCGGCGGCCTGGCCAGGCGGTACAGCC
CGCCCGCTGGAGCCCGACCCAGAAGACTTGAGAGGCCAAACTACGCCGGATGGGGCCCTGATCC
AGAGTGCACCATAGCCCAGTCCCGCGGACCTTCTCCACCTCGAGAGTCTGAAGCGCGGCCGCCC
TGGGGTGGGTGTACGTCCAGGCGGGGGCTGAACCCTCTGAGTGACCTTGGCAGGACCGTTCTAG
CTCGGCTGCCACCACGCGCAGATGTTTTCAAGTCAGCAAACATTTACTGAGCACCTACTGTGTA
CAAGATGAACATCTGCAACAAGCCCTCTAACAAGACAGCCCCTGAGAAGAGTGTGTGGACAGCG
CCTGCACAGGCCAGCGGACCCTCCCCGGAGCTGCAGGGCCAACGGTCCCGCCGGAATGGGTGGA
GCTGGCCCCCTCACCCACTCCAGATTGTGGCCTGGCTGCTGTACCTCTTCTTTGCTGTGATTGG
CTTTGGGGTCCTTGTTCCCCTTCTGCCTCACCACTGGGTGCCTGCTGGCTATGCTTGCATGGGC
GCCATCTTTGCTGGCCACCTCGTGGTGCACCTGACTGCTGTTTCCATCGATCCAGCAGATGCCA
ACGTGCGGGACAAGAGCTATGCAGGGCCCCTGCCCATCTTCAACCGCAGCCAACACGCACACGT
CATTGAAGACCTGCATTGCAACTTGTGTGACGTGGATGTGAGTGCTCGTTCCAAGCACTGCAGC
GCCTGCAACAAGTGCGTGTGCGGCTTCGACCACCACTGCAAGTGGCTCAACAACTGCGTGGGCG
AGAGGAACTACTGGCTCTTTCTACACAGTGTGGCATCTGCCTTACTGGGTGTCCTGCTCCTCGT
GCTGGTGGCCACTTATGTCTTTGTGGAGTTCTTTGTCAACCCCATGCGGCTGCGTACCAACCGC
CACTTCGAAGTCCTGAAGAATCACACAGATGTGTGGTTCATGTTCCTGCCTGCTGCCCCTGTGA
AGACCCAGGCTCCTGCCATCCTGGCTCTGGCTGCCCTACTCATCCTTCTGGGCCTGCTCTCCAC
AGCTTTGCTCGGCCACCTGCTCTGTTTCCACATTTATCTCATGTGGCACAAGCTCACCACCTAT
GAGTACATTGTGCAGCATCGTCCGCCACAGGAGGCAAAGGGGTCCCACAGGGAGCTCGAATCAT
GTCCCCCCAAGATGCGGCCCATTCAGGATACAGAGTTCTACATGCGGACCTTCGGTCATGTGCG
CCCAGAGCCCCCTGGCCAGGCCAGGCTTGCCGCAGTGAATGCCAACCCCTCCGGGTTTCTTGCC
ACCCACGGCCAAGTGGAGCCTCCACCACCCTCCTCCCCAGAGACCCTCGCTTTGCCCCCCCGGA
TCCAATCCCAGAAAAAGAGGAAGCGGCGCATGTATAAGGTGCCTACCTCTGGGACCTCGGACCG
GGAGCCTCCGTTGCCCAGGTTACCGGGGCCCCGGACCCCAGGCCGTCACTCCAGCTCGTCGTCG
GATTCCGCGGACGCCAGCCCTGTACACACCTCTGGGCCTGCGGCTGCCTACCACTCGGCGTCAG
CCGAGTCCATGGACGAGATTCCGGTGGCTCAGACGCGCCTAGGCAGCGCCGCTCTGGCCGCCGG
AGTGGTCAGGGACCGAGGGTCTGGACTGGCGCTGCAGGCGCTTGCGTCAGCCGCTTTCGTGAGC
CGGAGCAGCGGCAAGCCCGGGGCTCGGGGCAGCCCGGAGGCTTGTCTGGTGTAGCTGGGCAGAG
AATTAGGATGGCAGAGGAGCGGCGGCACCGACTCTCTATGCAACAACCCCACCCCGCCGCAACG
AGTGCACTTTAGGGATCCCTAGGGCCGGCAGGATCGGCCTCCTCCCCCACGACTCAGTAATACC
CGTCCCACCAGCGATGATGCTCCAATAAACTTTTTTTATGCTTTTGCTGCCTTAGTGCATACTC
CCTTAATGACAAGGGCCACGGGCCCTCCTGGAGCTGGACCACTGACAACCTAGGGGCAGTGAGT
GACCTCCCAGATTGTCATTTGGAGATACACAAAGACCTGAAATGCTCAAGTATGGGGCTCCTGA
TTGGGAAAAGTCCTGGAAGGATGCCTGGCGGTTATTTTTCGTGAAGGTTTGCACTTGAGAGAAG
GGGAAAAGCTGTCTTTGGGCTCTGGAGGCAGCAGCGAGAGCAGAGACTTTTAGGCTAATAACAG
GATGGGGTGGGGAATAAATGAAGGCTGCGGATCGAGAGGTCCAGGAGCTTTTCCCTGGAAGCAG
AATCAATGTCGGTGTACCAGGATTTTGAGGCCGGCACTCATGATTCGTTCATTGTCTCCTCCTG
CCCCCAGTGATCTGGAGTTGTGGCGTGGGATGTCACACGTTCATTGGAAAGCTGTGGTCTTGAG
TCAGCTCTAGACTCCACTATCACTAAGTCAAAGGACCTTTCCTGCTCTGCACCGACACCAACCC
CCTCCCTCCACCCCCGAAAAAAAAAAGTCTTCTATTGCAGCTCTGGGAAGCATGATATTCCCTG
GAGGTGGGGACCAGCTTTGAACTTTGGGCAGAGTCCAGAACTACAGAAATCTCGTCCCCCGGCT
GGGTTGCGAAGGCCACTGAGCTGCATCCAGAGCAGCGGGATGAGACTATCGCAGCAGCTCCGCC
CCCGCAGAGCGGAGAGGGCGGGGTCGGGTGGGTGGAGCCAGCCTGACCTTGGTCACACTCCTGC
CAGACAGCCCCGGGGGTGGGACTCACCGTCTCCATGGAGACCGAGAAACAAGGGATAATACGGC
GGAACCGCCCGGGCTGCAGTCCCGCCCCAGAGCCGGCAGGGAGCAGAGCTGCGGAGCCGCCCAG
TCCCTCTGTCCATTGTTGTGTCCTTCTGTCCATCGAACGCCCGCTGCAGGAGCAGCCACGAGGT
AGAAGCCGGGTGGCATGGCAGCAAGCACAGATGTGGCTGGGCTGGAGGAAAGCTTCCGCAAGTT
TGCCATCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCTG
TGCAAGGACTGCAAGGTGGCTGACGGAAAAGCTGTGACAGGGACCGATGTCGACATTGTCTTCT
CCAAAGTCAAGGGGAAGTCTGCTCGGGTCATCAACTATGAGGAGTTCAAGAAAGCCCTAGAAGA
GCTGGCACCCAAGCGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGATGCCATCTGTCAGCTG
GTGGCAGGCAAGGAACCAGCCAATGTGGGCGTCACT

hide sequence

RefSeq Acc Id:

XM_021094082 ⟹ XP_020949741

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	28,046,099 - 28,071,529 (-)	NCBI

Sequence:

show sequence

AACAGGCCCATCGCCGGACGAGGCCCAGCCCGCGGCGGCCTGGCCAGGCGGTACAGCCCGCCCG
CTGGAGCCCGACCCAGAAGACTTGAGAGGCCAAACTACGCCGGATGGGGCCCTGATCCAGAGTG
CACCATAGCCCAGTCCCGCGGACCTTCTCCACCTCGAGAGTCTGAAGCGCGGCCGCCCTGGGGT
GGGTGTACGTCCAGGCGGGGGCTGAACCCTCTGAGTGACCTTGGCAGGACCGTTCTAGCTCGGC
TGCCACCACGCGCAGATGTTTTCAAGTCAGCAAACATTTACTGAGCACCTACTGTGTACAAGAT
GAACATCTGCAACAAGCCCTCTAACAAGACAGCCCCTGAGAAGAGTGTGTGGACAGCGCCTGCA
CAGGCCAGCGGACCCTCCCCGGAGCTGCAGGGCCAACGGTCCCGCCGGAATGGGTGGAGCTGGC
CCCCTCACCCACTCCAGATTGTGGCCTGGCTGCTGTACCTCTTCTTTGCTGTGATTGGCTTTGG
GGTCCTTGTTCCCCTTCTGCCTCACCACTGGGTGCCTGCTGGCTATGCTTGCATGGGCGCCATC
TTTGCTGGCCACCTCGTGGTGCACCTGACTGCTGTTTCCATCGATCCAGCAGATGCCAACGTGC
GGGACAAGAGCTATGCAGGGCCCCTGCCCATCTTCAACCGCAGCCAACACGCACACGTCATTGA
AGACCTGCATTGCAACTTGTGTGACGTGGATGTGAGTGCTCGTTCCAAGCACTGCAGCGCCTGC
AACAAGTGCGTGTGCGGCTTCGACCACCACTGCAAGTGGCTCAACAACTGCGTGGGCGAGAGGA
ACTACTGGCTCTTTCTACACAGTGTGGCATCTGCCTTACTGGGTGTCCTGCTCCTCGTGCTGGT
GGCCACTTATGTCTTTGTGGAGTTCTTTGTCAACCCCATGCGGCTGCGTACCAACCGCCACTTC
GAAGTCCTGAAGAATCACACAGATGTGTGGTTCATGTTCCTGCCTGCTGCCCCTGTGAAGACCC
AGGCTCCTGCCATCCTGGCTCTGGCTGCCCTACTCATCCTTCTGGGCCTGCTCTCCACAGCTTT
GCTCGGCCACCTGCTCTGTTTCCACATTTATCTCATGTGGCACAAGCTCACCACCTATGAGTAC
ATTGTGCAGCATCGTCCGCCACAGGAGGCAAAGGGGTCCCACAGGGAGCTCGAATCATGTCCCC
CCAAGATGCGGCCCATTCAGGATACAGAGTTCTACATGCGGACCTTCGGTCATGTGCGCCCAGA
GCCCCCTGGCCAGGCCAGGCTTGCCGCAGTGAATGCCAACCCCTCCGGGTTTCTTGCCACCCAC
GGCCAAGTGGAGCCTCCACCACCCTCCTCCCCAGAGACCCTCGCTTTGCCCCCCCGGATCCAAT
CCCAGGTAGGGGGAACTGTGTTGGGCCCCTGTTCCGGTGGAAGGGGACGGGAAAGAAGCCTTTA
CCCCCATCCACTCCTCCACTTTTGGAGATGTGAAGTCTGGGGAAGGAGTACTCAGGCTCCCCCA
TCTCTGCAGAAAAAGAGGAAGCGGCGCATGTATAAGGTGCCTACCTCTGGGACCTCGGACCGGG
AGCCTCCGTTGCCCAGGTTACCGGGGCCCCGGACCCCAGGCCGTCACTCCAGCTCGTCGTCGGA
TTCCGCGGACGCCAGCCCTGTACACACCTCTGGGCCTGCGGCTGCCTACCACTCGGCGTCAGCC
GAGTCCATGGACGAGATTCCGGTGGCTCAGACGCGCCTAGGCAGCGCCGCTCTGGCCGCCGGAG
TGGTCAGGGACCGAGGGTCTGGACTGGCGCTGCAGGCGCTTGCGTCAGCCGCTTTCGTGAGCCG
GAGCAGCGGCAAGCCCGGGGCTCGGGGCAGCCCGGAGGCTTGTCTGGTGTAGCTGGGCAGAGAA
TTAGGATGGCAGAGGAGCGGCGGCACCGACTCTCTATGCAACAACCCCACCCCGCCGCAACGAG
TGCACTTTAGGGATCCCTAGGGCCGGCAGGATCGGCCTCCTCCCCCACGACTCAGTAATACCCG
TCCCACCAGCGATGATGCTCCAATAAACTTTTTTTATGCTTTTGCTGCCTTAGTGCATACTCCC
TTAATGACAAGGGCCACGGGCCCTCCTGGAGCTGGACCACTGACAACCTAGGGGCAGTGAGTGA
CCTCCCAGATTGTCATTTGGAGATACACAAAGACCTGAAATGCTCAAGTATGGGGCTCCTGATT
GGGAAAAGTCCTGGAAGGATGCCTGGCGGTTATTTTTCGTGAAGGTTTGCACTTGAGAGAAGGG
GAAAAGCTGTCTTTGGGCTCTGGAGGCAGCAGCGAGAGCAGAGACTTTTAGGCTAATAACAGGA
TGGGGTGGGGAATAAATGAAGGCTGCGGATCGAGAGGTCCAGGAGCTTTTCCCTGGAAGCAGAA
TCAATGTCGGTGTACCAGGATTTTGAGGCCGGCACTCATGATTCGTTCATTGTCTCCTCCTGCC
CCCAGTGATCTGGAGTTGTGGCGTGGGATGTCACACGTTCATTGGAAAGCTGTGGTCTTGAGTC
AGCTCTAGACTCCACTATCACTAAGTCAAAGGACCTTTCCTGCTCTGCACCGACACCAACCCCC
TCCCTCCACCCCCGAAAAAAAAAAGTCTTCTATTGCAGCTCTGGGAAGCATGATATTCCCTGGA
GGTGGGGACCAGCTTTGAACTTTGGGCAGAGTCCAGAACTACAGAAATCTCGTCCCCCGGCTGG
GTTGCGAAGGCCACTGAGCTGCATCCAGAGCAGCGGGATGAGACTATCGCAGCAGCTCCGCCCC
CGCAGAGCGGAGAGGGCGGGGTCGGGTGGGTGGAGCCAGCCTGACCTTGGTCACACTCCTGCCA
GACAGCCCCGGGGGTGGGACTCACCGTCTCCATGGAGACCGAGAAACAAGGGATAATACGGCGG
AACCGCCCGGGCTGCAGTCCCGCCCCAGAGCCGGCAGGGAGCAGAGCTGCGGAGCCGCCCAGTC
CCTCTGTCCATTGTTGTGTCCTTCTGTCCATCGAACGCCCGCTGCAGGAGCAGCCACGAGGTAG
AAGCCGGGTGGCATGGCAGCAAGCACAGATGTGGCTGGGCTGGAGGAAAGCTTCCGCAAGTTTG
CCATCCATGGTGACCCCAAGGCCAGTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCTGTG
CAAGGACTGCAAGGTGGCTGACGGAAAAGCTGTGACAGGGACCGATGTCGACATTGTCTTCTCC
AAAGTCAAGGGGAAGTCTGCTCGGGTCATCAACTATGAGGAGTTCAAGAAAGCCCTAGAAGAGC
TGGCACCCAAGCGATTCAAGGGGAAGAGCAAGGAGGAGGCCTTCGATGCCATCTGTCAGCTGGT
GGCAGGCAAGGAACCAGCCAATGTGGGCGTCACT

hide sequence

RefSeq Acc Id:

XM_021094083 ⟹ XP_020949742

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	28,046,099 - 28,064,758 (-)	NCBI

Sequence:

show sequence

CTGAGCAAGGGCAGGGACCGAACCCGCAACCTCATGGTTCCTAGTCAGATTCGTTAACCACTGC
GCCACGACGGGAACTCCCCTGCATCTGTCTTTGACTAACCTTGTCAGTTCTTGGACTAAAAGGG
ATGGTGGGATTGGGGTGGAGGAGTGCTGCCATCTGGTGGTTTGGCTCTGACCAAAACCTGTCTT
TCCCTGAGCTCCTTCAAGTGAGTCAAAGGCATCAGCTCACCTTTCTGTTCTCACTGCACCAGGC
TCAGAAAAACATGGTCATTTCTGTTGCTGGAAGGAACCAATGAGAAATTCTCCCCTCTCTCTTG
TGTGCTGGCCTCTTTCCAGCCAAGAATCCCAGGCAGCTCATCTGAGACACAGAGATGGTTCAGG
ATCCCCTAGTCCTTAAAGGGATTATGTGCTTGCAGAGAGACAGAAGATAGACCCCTCTTCTGAG
TACTCCCACTCCCTGTTTCCCTTAGCAAAGGGAAGGGGGGCCCTCTCTGACACTTGCATTTGGG
CCTCAGGACAGAGGTGACTAATCCTACCAGAATCAGCGTGTGTTCTCATCACTCTGTTCCCAGC
CCGATATTGTTACCAGATGAGAACATGTCTTATTGGGTTTAACTTTGATGGCTGTGGAGACAGA
GCATTTTGTTATTTATTTATTTATTTAGTCTTTTTAGGGCCACACCAGAGGCATATGGAGGTTC
CCAGGCTAGGGGTCCAATTGGAGCTGAAGCCACCGGCCTATGCCACAGCCACAGCAACACAAGA
TCCGAGCCACATCTGCAACCTATACCACAGCTCACTACAACACTGGATCCTTAACCCACTGAGT
GAGGCCATGGATCGAACCTTCATCCTCATGGATACTAGTCAGATTCGTTTCTGCTGGGCCACAA
CGGGAACTCCAGACAGAGCATTTAGAGTAACAGGCAGTCACCCCCTGTCCTGAATAAACCCTGG
ACCCTTCTAAGCTCTGGGGCTTAGAGAGCAGCACTCTCCTGCCGCCTTCCCCCACTGCCAGGGT
CCTCATGCCAGGGCCCTGGATTCTCCTGCAGAGTAGCTGGGAGATAGCTCCACATCCCAGCCTG
TTCCCCCTCTGCTGAGACCTGGCTGCCGACATGGGGTTCTGGGCTCCAGCTCCAGCCTCCTCAG
GCTAATGCTCTCTCTACTCTTTCTCCCTCTGGAGATGAACATCTGCAACAAGCCCTCTAACAAG
ACAGCCCCTGAGAAGAGTGTGTGGACAGCGCCTGCACAGGCCAGCGGACCCTCCCCGGAGCTGC
AGGGCCAACGGTCCCGCCGGAATGGGTGGAGCTGGCCCCCTCACCCACTCCAGATTGTGGCCTG
GCTGCTGTACCTCTTCTTTGCTGTGATTGGCTTTGGGGTCCTTGTTCCCCTTCTGCCTCACCAC
TGGGTGCCTGCTGGCTATGCTTGCATGGGCGCCATCTTTGCTGGCCACCTCGTGGTGCACCTGA
CTGCTGTTTCCATCGATCCAGCAGATGCCAACGTGCGGGACAAGAGCTATGCAGGGCCCCTGCC
CATCTTCAACCGCAGCCAACACGCACACGTCATTGAAGACCTGCATTGCAACTTGTGTGACGTG
GATGTGAGTGCTCGTTCCAAGCACTGCAGCGCCTGCAACAAGTGCGTGTGCGGCTTCGACCACC
ACTGCAAGTGGCTCAACAACTGCGTGGGCGAGAGGAACTACTGGCTCTTTCTACACAGTGTGGC
ATCTGCCTTACTGGGTGTCCTGCTCCTCGTGCTGGTGGCCACTTATGTCTTTGTGGAGTTCTTT
GTCAACCCCATGCGGCTGCGTACCAACCGCCACTTCGAAGTCCTGAAGAATCACACAGATGTGT
GGTTCATGTTCCTGCCTGCTGCCCCTGTGAAGACCCAGGCTCCTGCCATCCTGGCTCTGGCTGC
CCTACTCATCCTTCTGGGCCTGCTCTCCACAGCTTTGCTCGGCCACCTGCTCTGTTTCCACATT
TATCTCATGTGGCACAAGCTCACCACCTATGAGTACATTGTGCAGCATCGTCCGCCACAGGAGG
CAAAGGGGTCCCACAGGGAGCTCGAATCATGTCCCCCCAAGATGCGGCCCATTCAGGATACAGA
GTTCTACATGCGGACCTTCGGTCATGTGCGCCCAGAGCCCCCTGGCCAGGCCAGGCTTGCCGCA
GTGAATGCCAACCCCTCCGGGTTTCTTGCCACCCACGGCCAAGTGGAGCCTCCACCACCCTCCT
CCCCAGAGACCCTCGCTTTGCCCCCCCGGATCCAATCCCAGAAAAAGAGGAAGCGGCGCATGTA
TAAGGTGCCTACCTCTGGGACCTCGGACCGGGAGCCTCCGTTGCCCAGGTTACCGGGGCCCCGG
ACCCCAGGCCGTCACTCCAGCTCGTCGTCGGATTCCGCGGACGCCAGCCCTGTACACACCTCTG
GGCCTGCGGCTGCCTACCACTCGGCGTCAGCCGAGTCCATGGACGAGATTCCGGTGGCTCAGAC
GCGCCTAGGCAGCGCCGCTCTGGCCGCCGGAGTGGTCAGGGACCGAGGGTCTGGACTGGCGCTG
CAGGCGCTTGCGTCAGCCGCTTTCGTGAGCCGGAGCAGCGGCAAGCCCGGGGCTCGGGGCAGCC
CGGAGGCTTGTCTGGTGTAGCTGGGCAGAGAATTAGGATGGCAGAGGAGCGGCGGCACCGACTC
TCTATGCAACAACCCCACCCCGCCGCAACGAGTGCACTTTAGGGATCCCTAGGGCCGGCAGGAT
CGGCCTCCTCCCCCACGACTCAGTAATACCCGTCCCACCAGCGATGATGCTCCAATAAACTTTT
TTTATGCTTTTGCTGCCTTAGTGCATACTCCCTTAATGACAAGGGCCACGGGCCCTCCTGGAGC
TGGACCACTGACAACCTAGGGGCAGTGAGTGACCTCCCAGATTGTCATTTGGAGATACACAAAG
ACCTGAAATGCTCAAGTATGGGGCTCCTGATTGGGAAAAGTCCTGGAAGGATGCCTGGCGGTTA
TTTTTCGTGAAGGTTTGCACTTGAGAGAAGGGGAAAAGCTGTCTTTGGGCTCTGGAGGCAGCAG
CGAGAGCAGAGACTTTTAGGCTAATAACAGGATGGGGTGGGGAATAAATGAAGGCTGCGGATCG
AGAGGTCCAGGAGCTTTTCCCTGGAAGCAGAATCAATGTCGGTGTACCAGGATTTTGAGGCCGG
CACTCATGATTCGTTCATTGTCTCCTCCTGCCCCCAGTGATCTGGAGTTGTGGCGTGGGATGTC
ACACGTTCATTGGAAAGCTGTGGTCTTGAGTCAGCTCTAGACTCCACTATCACTAAGTCAAAGG
ACCTTTCCTGCTCTGCACCGACACCAACCCCCTCCCTCCACCCCCGAAAAAAAAAAGTCTTCTA
TTGCAGCTCTGGGAAGCATGATATTCCCTGGAGGTGGGGACCAGCTTTGAACTTTGGGCAGAGT
CCAGAACTACAGAAATCTCGTCCCCCGGCTGGGTTGCGAAGGCCACTGAGCTGCATCCAGAGCA
GCGGGATGAGACTATCGCAGCAGCTCCGCCCCCGCAGAGCGGAGAGGGCGGGGTCGGGTGGGTG
GAGCCAGCCTGACCTTGGTCACACTCCTGCCAGACAGCCCCGGGGGTGGGACTCACCGTCTCCA
TGGAGACCGAGAAACAAGGGATAATACGGCGGAACCGCCCGGGCTGCAGTCCCGCCCCAGAGCC
GGCAGGGAGCAGAGCTGCGGAGCCGCCCAGTCCCTCTGTCCATTGTTGTGTCCTTCTGTCCATC
GAACGCCCGCTGCAGGAGCAGCCACGAGGTAGAAGCCGGGTGGCATGGCAGCAAGCACAGATGT
GGCTGGGCTGGAGGAAAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCAAGGCCAGTGGGCAA
GAGATGAATGGCAAGAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGCTGACGGAAAAGCTG
TGACAGGGACCGATGTCGACATTGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCGGGTCATCAA
CTATGAGGAGTTCAAGAAAGCCCTAGAAGAGCTGGCACCCAAGCGATTCAAGGGGAAGAGCAAG
GAGGAGGCCTTCGATGCCATCTGTCAGCTGGTGGCAGGCAAGGAACCAGCCAATGTGGGCGTCA
CT

hide sequence

Protein Sequences


Protein RefSeqs	XP_013853719	(Get FASTA)	NCBI Sequence Viewer
	XP_020949741	(Get FASTA)	NCBI Sequence Viewer
	XP_020949742	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000002997
	ENSSSCP00000002997.3
	ENSSSCP00005003164.1
	ENSSSCP00005003174.1
	ENSSSCP00055008476.1
	ENSSSCP00055008514.1
	ENSSSCP00065012151.1
	ENSSSCP00065012154.1
	ENSSSCP00070029538.1

RefSeq Acc Id:	XP_013853719 ⟸ XM_013998265
- Peptide Label:	isoform X3
- UniProtKB:	A0A480K443 (UniProtKB/TrEMBL), A0A8D1PRT7 (UniProtKB/TrEMBL), A0A8D0I498 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNICNKPSNKTAPEKSVWTAPAQASGPSPELQGQRSRRNGWSWPPHPLQIVAWLLYLFFAVIGF GVLVPLLPHHWVPAGYACMGAIFAGHLVVHLTAVSIDPADANVRDKSYAGPLPIFNRSQHAHVI EDLHCNLCDVDVSARSKHCSACNKCVCGFDHHCKWLNNCVGERNYWLFLHSVASALLGVLLLVL VATYVFVEFFVNPMRLRTNRHFEVLKNHTDVWFMFLPAAPVKTQAPAILALAALLILLGLLSTA LLGHLLCFHIYLMWHKLTTYEYIVQHRPPQEAKGSHRELESCPPKMRPIQDTEFYMRTFGHVRP EPPGQARLAAVNANPSGFLATHGQVEPPPPSSPETLALPPRIQSQKKRKRRMYKVPTSGTSDRE PPLPRLPGPRTPGRHSSSSSDSADASPVHTSGPAAAYHSASAESMDEIPVAQTRLGSAALAAGV VRDRGSGLALQALASAAFVSRSSGKPGARGSPEACLV hide sequence

RefSeq Acc Id:	XP_020949741 ⟸ XM_021094082
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1XWM6 (UniProtKB/TrEMBL), A0A8D1PM47 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNICNKPSNKTAPEKSVWTAPAQASGPSPELQGQRSRRNGWSWPPHPLQIVAWLLYLFFAVIGF GVLVPLLPHHWVPAGYACMGAIFAGHLVVHLTAVSIDPADANVRDKSYAGPLPIFNRSQHAHVI EDLHCNLCDVDVSARSKHCSACNKCVCGFDHHCKWLNNCVGERNYWLFLHSVASALLGVLLLVL VATYVFVEFFVNPMRLRTNRHFEVLKNHTDVWFMFLPAAPVKTQAPAILALAALLILLGLLSTA LLGHLLCFHIYLMWHKLTTYEYIVQHRPPQEAKGSHRELESCPPKMRPIQDTEFYMRTFGHVRP EPPGQARLAAVNANPSGFLATHGQVEPPPPSSPETLALPPRIQSQVGGTVLGPCSGGRGRERSL YPHPLLHFWRCEVWGRSTQAPPSLQKKRKRRMYKVPTSGTSDREPPLPRLPGPRTPGRHSSSSS DSADASPVHTSGPAAAYHSASAESMDEIPVAQTRLGSAALAAGVVRDRGSGLALQALASAAFVS RSSGKPGARGSPEACLV hide sequence

RefSeq Acc Id:	XP_020949742 ⟸ XM_021094083
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1UHV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLSLLFLPLEMNICNKPSNKTAPEKSVWTAPAQASGPSPELQGQRSRRNGWSWPPHPLQIVAWL LYLFFAVIGFGVLVPLLPHHWVPAGYACMGAIFAGHLVVHLTAVSIDPADANVRDKSYAGPLPI FNRSQHAHVIEDLHCNLCDVDVSARSKHCSACNKCVCGFDHHCKWLNNCVGERNYWLFLHSVAS ALLGVLLLVLVATYVFVEFFVNPMRLRTNRHFEVLKNHTDVWFMFLPAAPVKTQAPAILALAAL LILLGLLSTALLGHLLCFHIYLMWHKLTTYEYIVQHRPPQEAKGSHRELESCPPKMRPIQDTEF YMRTFGHVRPEPPGQARLAAVNANPSGFLATHGQVEPPPPSSPETLALPPRIQSQKKRKRRMYK VPTSGTSDREPPLPRLPGPRTPGRHSSSSSDSADASPVHTSGPAAAYHSASAESMDEIPVAQTR LGSAALAAGVVRDRGSGLALQALASAAFVSRSSGKPGARGSPEACLV hide sequence

RefSeq Acc Id:

ENSSSCP00000002997 ⟸ ENSSSCT00000003076

Protein Domains

Palmitoyltransferase DHHC

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000002778	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005003744	UniProtKB/TrEMBL
	ENSSSCG00055005473	UniProtKB/TrEMBL
	ENSSSCG00065022353	UniProtKB/TrEMBL
	ENSSSCG00070017921	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000003076	ENTREZGENE
	ENSSSCT00000003076.5	UniProtKB/TrEMBL
	ENSSSCT00005005509.1	UniProtKB/TrEMBL
	ENSSSCT00005005523.1	UniProtKB/TrEMBL
	ENSSSCT00055010719.1	UniProtKB/TrEMBL
	ENSSSCT00055010764.1	UniProtKB/TrEMBL
	ENSSSCT00065029731.1	UniProtKB/TrEMBL
	ENSSSCT00065029737.1	UniProtKB/TrEMBL
	ENSSSCT00070035362.1	UniProtKB/TrEMBL
InterPro	Palmitoyltrfase_DHHC	UniProtKB/TrEMBL
NCBI Gene	ZDHHC1	ENTREZGENE
PANTHER	PALMITOYLTRANSFERASE ZDHHC1	UniProtKB/TrEMBL
	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	DHHC	UniProtKB/TrEMBL
PROSITE	DHHC	UniProtKB/TrEMBL
UniProt	A0A480K443	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UHV2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0I498	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1PM47	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1PRT7	ENTREZGENE
	A0A8D1XWM6	ENTREZGENE, UniProtKB/TrEMBL
	F1S2J0_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A8D1PRT7	UniProtKB/TrEMBL
VGNC ID	VGNC:95115	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar