ZSCAN20 (zinc finger and SCAN domain containing 20) - Rat Genome Database

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Gene: ZSCAN20 (zinc finger and SCAN domain containing 20) Homo sapiens
Analyze
Symbol: ZSCAN20
Name: zinc finger and SCAN domain containing 20
RGD ID: 1353276
HGNC Page HGNC:13093
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KOX29; ZFP-31; zinc finger and SCAN domain-containing protein 20; zinc finger protein 31; zinc finger protein 31 (kox 29); zinc finger protein 360; zinc finger protein KOX29; ZNF31; ZNF360
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38133,472,645 - 33,501,643 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl133,472,645 - 33,501,643 (+)EnsemblGRCh38hg38GRCh38
GRCh37133,938,246 - 33,967,243 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36133,710,819 - 33,734,582 (+)NCBINCBI36Build 36hg18NCBI36
Build 34133,607,351 - 33,631,086NCBI
Celera132,210,051 - 32,233,817 (+)NCBICelera
Cytogenetic Map1p35.1NCBI
HuRef132,054,445 - 32,078,199 (+)NCBIHuRef
CHM1_1134,053,603 - 34,077,368 (+)NCBICHM1_1
T2T-CHM13v2.0133,334,198 - 33,363,244 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2288909   PMID:12477932   PMID:15489334   PMID:16189514   PMID:16429158   PMID:18029348   PMID:19274049   PMID:20379614   PMID:21873635   PMID:23824909   PMID:24453475   PMID:26186194  
PMID:26871637   PMID:28514442   PMID:29507755   PMID:29883609   PMID:33961781   PMID:36168627  


Genomics

Comparative Map Data
ZSCAN20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38133,472,645 - 33,501,643 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl133,472,645 - 33,501,643 (+)EnsemblGRCh38hg38GRCh38
GRCh37133,938,246 - 33,967,243 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36133,710,819 - 33,734,582 (+)NCBINCBI36Build 36hg18NCBI36
Build 34133,607,351 - 33,631,086NCBI
Celera132,210,051 - 32,233,817 (+)NCBICelera
Cytogenetic Map1p35.1NCBI
HuRef132,054,445 - 32,078,199 (+)NCBIHuRef
CHM1_1134,053,603 - 34,077,368 (+)NCBICHM1_1
T2T-CHM13v2.0133,334,198 - 33,363,244 (+)NCBIT2T-CHM13v2.0
Zscan20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394128,472,142 - 128,503,933 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4128,477,332 - 128,503,891 (-)EnsemblGRCm39 Ensembl
GRCm384128,578,670 - 128,610,153 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4128,583,539 - 128,610,098 (-)EnsemblGRCm38mm10GRCm38
MGSCv374128,260,783 - 128,287,342 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364128,085,843 - 128,092,266 (-)NCBIMGSCv36mm8
Celera4126,915,182 - 126,941,927 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map462.04NCBI
Zscan20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85146,214,023 - 146,240,678 (-)NCBIGRCr8
mRatBN7.25140,926,596 - 140,956,285 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5140,930,689 - 140,956,336 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.05146,760,822 - 146,788,945 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5146,762,683 - 146,787,676 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05150,499,839 - 150,527,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45147,812,430 - 147,831,362 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5139,413,972 - 139,442,095 (-)NCBICelera
Cytogenetic Map5q36NCBI
Zscan20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545211,648,123 - 11,662,027 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545211,641,089 - 11,662,453 (+)NCBIChiLan1.0ChiLan1.0
ZSCAN20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21193,322,477 - 193,354,169 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11192,444,619 - 192,476,311 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0132,758,663 - 32,787,745 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1133,943,212 - 33,967,139 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl133,943,212 - 33,967,134 (+)Ensemblpanpan1.1panPan2
ZSCAN20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1267,939,840 - 67,959,524 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl267,939,744 - 67,953,209 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha264,518,018 - 64,537,695 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0268,500,582 - 68,520,249 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl268,500,503 - 68,520,254 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1265,313,370 - 65,333,044 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0266,336,577 - 66,356,245 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0267,327,928 - 67,347,850 (-)NCBIUU_Cfam_GSD_1.0
Zscan20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505850,463,362 - 50,483,339 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647416,295,643 - 16,308,125 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647416,288,205 - 16,308,121 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZSCAN20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl689,732,654 - 89,754,719 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1689,732,566 - 89,760,828 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2683,826,342 - 83,848,474 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZSCAN20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12099,380,756 - 99,405,191 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2099,381,677 - 99,404,730 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603317,289,981 - 17,319,204 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zscan20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476416,558,679 - 16,574,789 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476416,552,133 - 16,575,672 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZSCAN20
35 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_145238.3(ZSCAN20):c.731C>T (p.Pro244Leu) single nucleotide variant Malignant melanoma [RCV000064727] Chr1:33489567 [GRCh38]
Chr1:33955167 [GRCh37]
Chr1:33727754 [NCBI36]
Chr1:1p35.1		 not provided
GRCh38/hg38 1p35.1(chr1:33411353-33916406)x3 copy number gain See cases [RCV000134966] Chr1:33411353..33916406 [GRCh38]
Chr1:33876954..34382007 [GRCh37]
Chr1:33649541..34154594 [NCBI36]
Chr1:1p35.1		 pathogenic|uncertain significance
GRCh38/hg38 1p36.11-34.2(chr1:24381206-41401517)x3 copy number gain See cases [RCV000138891] Chr1:24381206..41401517 [GRCh38]
Chr1:24707696..41886350 [GRCh37]
Chr1:24580283..41658937 [NCBI36]
Chr1:1p36.11-34.2		 pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 copy number loss not provided [RCV000762767] Chr1:20608823..120546301 [GRCh37]
Chr1:1p36.12-12		 likely benign
GRCh37/hg19 1p35.1(chr1:33873990-34425153)x3 copy number gain See cases [RCV000448871] Chr1:33873990..34425153 [GRCh37]
Chr1:1p35.1		 uncertain significance
GRCh37/hg19 1p35.1(chr1:33878903-34381948)x3 copy number gain See cases [RCV000448309] Chr1:33878903..34381948 [GRCh37]
Chr1:1p35.1		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001377376.1(ZSCAN20):c.865G>A (p.Asp289Asn) single nucleotide variant not specified [RCV004322189] Chr1:33491123 [GRCh38]
Chr1:33956723 [GRCh37]
Chr1:1p35.1		 uncertain significance
NC_000001.10:g.(?_33241563)_(46663513_?)dup duplication Charcot-Marie-Tooth disease dominant intermediate C [RCV000708276] Chr1:33241563..46663513 [GRCh37]
Chr1:1p35.1-34.1		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p35.2-34.3(chr1:31562164-37421958)x3 copy number gain not provided [RCV000748949] Chr1:31562164..37421958 [GRCh37]
Chr1:1p35.2-34.3		 pathogenic
GRCh37/hg19 1p35.1-34.3(chr1:32859415-36454915) copy number loss not provided [RCV000767772] Chr1:32859415..36454915 [GRCh37]
Chr1:1p35.1-34.3		 pathogenic
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3 copy number gain Global developmental delay [RCV000787285] Chr1:103343285..103455144 [GRCh37]
Chr1:1p36.22-21.1		 uncertain significance
GRCh37/hg19 1p35.1(chr1:33872592-34425324)x3 copy number gain not provided [RCV000849466] Chr1:33872592..34425324 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1929G>C (p.Glu643Asp) single nucleotide variant not specified [RCV004326346] Chr1:33494273 [GRCh38]
Chr1:33959873 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.109T>C (p.Trp37Arg) single nucleotide variant not specified [RCV004306167] Chr1:33479397 [GRCh38]
Chr1:33944998 [GRCh37]
Chr1:1p35.1		 likely benign
GRCh37/hg19 1p35.2-35.1(chr1:30819875-34380419)x3 copy number gain not provided [RCV001005079] Chr1:30819875..34380419 [GRCh37]
Chr1:1p35.2-35.1		 likely pathogenic
NC_000001.10:g.(?_33241563)_(46663513_?)dup duplication Charcot-Marie-Tooth disease, dominant intermediate C [RCV001308684] Chr1:33241563..46663513 [GRCh37]
Chr1:1p35.1-34.1		 uncertain significance
GRCh37/hg19 1p35.1-33(chr1:33285582-47891811) copy number gain not specified [RCV002052781] Chr1:33285582..47891811 [GRCh37]
Chr1:1p35.1-33		 pathogenic
NM_001377376.1(ZSCAN20):c.3018G>C (p.Gln1006His) single nucleotide variant not specified [RCV004298571] Chr1:33495362 [GRCh38]
Chr1:33960962 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1042C>T (p.Arg348Trp) single nucleotide variant not specified [RCV004187138] Chr1:33491300 [GRCh38]
Chr1:33956900 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.754A>T (p.Ser252Cys) single nucleotide variant not specified [RCV004117954] Chr1:33489590 [GRCh38]
Chr1:33955190 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1672A>G (p.Thr558Ala) single nucleotide variant not specified [RCV004152906] Chr1:33493414 [GRCh38]
Chr1:33959014 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2702A>T (p.Lys901Ile) single nucleotide variant not specified [RCV004129832] Chr1:33495046 [GRCh38]
Chr1:33960646 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2957C>T (p.Pro986Leu) single nucleotide variant not specified [RCV004212962] Chr1:33495301 [GRCh38]
Chr1:33960901 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.254G>A (p.Arg85His) single nucleotide variant not specified [RCV004127963] Chr1:33479542 [GRCh38]
Chr1:33945143 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2143T>G (p.Cys715Gly) single nucleotide variant not specified [RCV004199988] Chr1:33494487 [GRCh38]
Chr1:33960087 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1823A>G (p.Asn608Ser) single nucleotide variant not specified [RCV004147049] Chr1:33493565 [GRCh38]
Chr1:33959165 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1138G>T (p.Val380Phe) single nucleotide variant not specified [RCV004192359] Chr1:33491396 [GRCh38]
Chr1:33956996 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.406G>T (p.Ala136Ser) single nucleotide variant not specified [RCV004119636] Chr1:33479694 [GRCh38]
Chr1:33945295 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2410A>C (p.Asn804His) single nucleotide variant not specified [RCV004111076] Chr1:33494754 [GRCh38]
Chr1:33960354 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.520C>A (p.Gln174Lys) single nucleotide variant not specified [RCV004234993] Chr1:33488567 [GRCh38]
Chr1:33954167 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.11C>G (p.Ala4Gly) single nucleotide variant not specified [RCV004150206] Chr1:33479299 [GRCh38]
Chr1:33944900 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.734C>T (p.Pro245Leu) single nucleotide variant not specified [RCV004106972] Chr1:33489570 [GRCh38]
Chr1:33955170 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.811G>A (p.Gly271Arg) single nucleotide variant not specified [RCV004198026] Chr1:33491069 [GRCh38]
Chr1:33956669 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2804A>G (p.Asp935Gly) single nucleotide variant not specified [RCV004153015] Chr1:33495148 [GRCh38]
Chr1:33960748 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.370G>A (p.Ala124Thr) single nucleotide variant not specified [RCV004201017] Chr1:33479658 [GRCh38]
Chr1:33945259 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.262G>A (p.Glu88Lys) single nucleotide variant not specified [RCV004089749] Chr1:33479550 [GRCh38]
Chr1:33945151 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1118T>C (p.Leu373Pro) single nucleotide variant not specified [RCV004144338] Chr1:33491376 [GRCh38]
Chr1:33956976 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1568G>A (p.Arg523Gln) single nucleotide variant not specified [RCV004205603] Chr1:33493310 [GRCh38]
Chr1:33958910 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.263A>T (p.Glu88Val) single nucleotide variant not specified [RCV004089750] Chr1:33479551 [GRCh38]
Chr1:33945152 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.3002G>C (p.Ser1001Thr) single nucleotide variant not specified [RCV004122066] Chr1:33495346 [GRCh38]
Chr1:33960946 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1162C>T (p.Arg388Trp) single nucleotide variant not specified [RCV004095667] Chr1:33491420 [GRCh38]
Chr1:33957020 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1072C>T (p.Arg358Trp) single nucleotide variant not specified [RCV004253632] Chr1:33491330 [GRCh38]
Chr1:33956930 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1766G>C (p.Arg589Thr) single nucleotide variant not specified [RCV004350180] Chr1:33493508 [GRCh38]
Chr1:33959108 [GRCh37]
Chr1:1p35.1		 uncertain significance
Single allele inversion Bilateral polymicrogyria [RCV003459046] Chr1:33246132..61045156 [GRCh38]
Chr1:1p35.1-31.3		 likely pathogenic
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3 copy number gain Trisomy 12p [RCV003447845] Chr1:99125..34026935 [GRCh38]
Chr1:1p36.33-35.1		 pathogenic
NM_001377376.1(ZSCAN20):c.1225G>A (p.Val409Ile) single nucleotide variant not specified [RCV004487709] Chr1:33491483 [GRCh38]
Chr1:33957083 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2089C>G (p.Leu697Val) single nucleotide variant not specified [RCV004487715] Chr1:33494433 [GRCh38]
Chr1:33960033 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1361G>A (p.Cys454Tyr) single nucleotide variant not specified [RCV004487710] Chr1:33491619 [GRCh38]
Chr1:33957219 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.447G>T (p.Arg149Ser) single nucleotide variant not specified [RCV004487720] Chr1:33488494 [GRCh38]
Chr1:33954094 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1153C>T (p.Arg385Trp) single nucleotide variant not specified [RCV004487707] Chr1:33491411 [GRCh38]
Chr1:33957011 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.313A>G (p.Arg105Gly) single nucleotide variant not specified [RCV004487719] Chr1:33479601 [GRCh38]
Chr1:33945202 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.961G>A (p.Val321Met) single nucleotide variant not specified [RCV004487722] Chr1:33491219 [GRCh38]
Chr1:33956819 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1163G>A (p.Arg388Gln) single nucleotide variant not specified [RCV004487708] Chr1:33491421 [GRCh38]
Chr1:33957021 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2372A>G (p.Glu791Gly) single nucleotide variant not specified [RCV004487717] Chr1:33494716 [GRCh38]
Chr1:33960316 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.2117C>T (p.Ala706Val) single nucleotide variant not specified [RCV004487716] Chr1:33494461 [GRCh38]
Chr1:33960061 [GRCh37]
Chr1:1p35.1		 likely benign
NM_001377376.1(ZSCAN20):c.2561A>T (p.Gln854Leu) single nucleotide variant not specified [RCV004487718] Chr1:33494905 [GRCh38]
Chr1:33960505 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1552C>T (p.Arg518Trp) single nucleotide variant not specified [RCV004487713] Chr1:33493294 [GRCh38]
Chr1:33958894 [GRCh37]
Chr1:1p35.1		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001377376.1(ZSCAN20):c.748G>A (p.Gly250Arg) single nucleotide variant not specified [RCV004308407] Chr1:33489584 [GRCh38]
Chr1:33955184 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.757G>A (p.Val253Met) single nucleotide variant not specified [RCV004186212] Chr1:33489593 [GRCh38]
Chr1:33955193 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.1431C>A (p.Phe477Leu) single nucleotide variant not specified [RCV004350039] Chr1:33491689 [GRCh38]
Chr1:33957289 [GRCh37]
Chr1:1p35.1		 likely benign
NM_001377376.1(ZSCAN20):c.1455C>G (p.His485Gln) single nucleotide variant not specified [RCV004487711] Chr1:33493197 [GRCh38]
Chr1:33958797 [GRCh37]
Chr1:1p35.1		 uncertain significance
NM_001377376.1(ZSCAN20):c.149C>G (p.Ser50Cys) single nucleotide variant not specified [RCV004487712] Chr1:33479437 [GRCh38]
Chr1:33945038 [GRCh37]
Chr1:1p35.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:965
Count of miRNA genes:698
Interacting mature miRNAs:796
Transcripts:ENST00000361328, ENST00000373413, ENST00000480917
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH36794  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371779,089,938 - 79,090,023UniSTSGRCh37
Build 361776,704,533 - 76,704,618RGDNCBI36
Celera1775,718,026 - 75,718,111RGD
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p34.3UniSTS
HuRef1774,529,579 - 74,529,664UniSTS
HuRef132,060,541 - 32,061,541UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1 2 2 9 26 5
Low 2400 2037 1420 340 1179 183 3807 1685 2717 367 1424 1499 172 1 1163 2357 5 2
Below cutoff 38 939 300 278 756 276 546 509 1008 52 10 109 2 41 430

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001377376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017002237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017002238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017002239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017002241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC115285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI651390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI699720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL138837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC336055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF510728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X52360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000361328   ⟹   ENSP00000355053
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl133,472,645 - 33,496,507 (+)Ensembl
RefSeq Acc Id: ENST00000373413   ⟹   ENSP00000362512
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl133,472,651 - 33,492,636 (+)Ensembl
RefSeq Acc Id: ENST00000480917
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl133,472,660 - 33,489,245 (+)Ensembl
RefSeq Acc Id: ENST00000684572   ⟹   ENSP00000507139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl133,472,645 - 33,501,643 (+)Ensembl
RefSeq Acc Id: NM_001377376   ⟹   NP_001364305
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377377   ⟹   NP_001364306
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377378   ⟹   NP_001364307
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377379   ⟹   NP_001364308
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
Sequence:
RefSeq Acc Id: NM_145238   ⟹   NP_660281
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
GRCh37133,938,232 - 33,962,105 (+)NCBI
Build 36133,710,819 - 33,734,582 (+)NCBI Archive
Celera132,210,051 - 32,233,817 (+)RGD
HuRef132,054,445 - 32,078,199 (+)ENTREZGENE
CHM1_1134,053,603 - 34,077,368 (+)NCBI
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017002237   ⟹   XP_016857726
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017002238   ⟹   XP_016857727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017002241   ⟹   XP_016857730
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,488,564 - 33,501,643 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047429970   ⟹   XP_047285926
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_047429971   ⟹   XP_047285927
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_047429972   ⟹   XP_047285928
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_047429973   ⟹   XP_047285929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_047429974   ⟹   XP_047285930
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,645 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_047429975   ⟹   XP_047285931
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,489,114 - 33,501,643 (+)NCBI
RefSeq Acc Id: XM_054338614   ⟹   XP_054194589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,198 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338615   ⟹   XP_054194590
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338616   ⟹   XP_054194591
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,198 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338617   ⟹   XP_054194592
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338618   ⟹   XP_054194593
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,198 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338619   ⟹   XP_054194594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338620   ⟹   XP_054194595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,334,247 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338621   ⟹   XP_054194596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,350,165 - 33,363,244 (+)NCBI
RefSeq Acc Id: XM_054338622   ⟹   XP_054194597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0133,350,715 - 33,363,244 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001364305 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364306 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364307 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364308 (Get FASTA)   NCBI Sequence Viewer  
  NP_660281 (Get FASTA)   NCBI Sequence Viewer  
  XP_016857726 (Get FASTA)   NCBI Sequence Viewer  
  XP_016857727 (Get FASTA)   NCBI Sequence Viewer  
  XP_016857730 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285926 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285927 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285928 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285929 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285930 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285931 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194589 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194590 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194591 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194592 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194593 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194594 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194595 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194596 (Get FASTA)   NCBI Sequence Viewer  
  XP_054194597 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH08827 (Get FASTA)   NCBI Sequence Viewer  
  AAH11404 (Get FASTA)   NCBI Sequence Viewer  
  BAD18552 (Get FASTA)   NCBI Sequence Viewer  
  BAF82884 (Get FASTA)   NCBI Sequence Viewer  
  CAA36586 (Get FASTA)   NCBI Sequence Viewer  
  EAX07454 (Get FASTA)   NCBI Sequence Viewer  
  EAX07455 (Get FASTA)   NCBI Sequence Viewer  
  EAX07456 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000355053
  ENSP00000355053.3
  ENSP00000362512.1
  ENSP00000507139
  ENSP00000507139.1
GenBank Protein P17040 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_660281   ⟸   NM_145238
- Peptide Label: isoform 1
- UniProtKB: Q96FA9 (UniProtKB/Swiss-Prot),   Q6ZN23 (UniProtKB/Swiss-Prot),   P17040 (UniProtKB/Swiss-Prot),   B1ALI6 (UniProtKB/Swiss-Prot),   B1ALI5 (UniProtKB/Swiss-Prot),   B1ALI4 (UniProtKB/Swiss-Prot),   A8K2D0 (UniProtKB/Swiss-Prot),   Q96H84 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016857726   ⟸   XM_017002237
- Peptide Label: isoform X1
- UniProtKB: Q96FA9 (UniProtKB/Swiss-Prot),   Q6ZN23 (UniProtKB/Swiss-Prot),   B1ALI6 (UniProtKB/Swiss-Prot),   B1ALI5 (UniProtKB/Swiss-Prot),   B1ALI4 (UniProtKB/Swiss-Prot),   A8K2D0 (UniProtKB/Swiss-Prot),   Q96H84 (UniProtKB/Swiss-Prot),   P17040 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016857727   ⟸   XM_017002238
- Peptide Label: isoform X2
- UniProtKB: P17040 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016857730   ⟸   XM_017002241
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: NP_001364305   ⟸   NM_001377376
- Peptide Label: isoform 1
- UniProtKB: Q96FA9 (UniProtKB/Swiss-Prot),   Q6ZN23 (UniProtKB/Swiss-Prot),   P17040 (UniProtKB/Swiss-Prot),   B1ALI6 (UniProtKB/Swiss-Prot),   B1ALI5 (UniProtKB/Swiss-Prot),   B1ALI4 (UniProtKB/Swiss-Prot),   A8K2D0 (UniProtKB/Swiss-Prot),   Q96H84 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001364306   ⟸   NM_001377377
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001364308   ⟸   NM_001377379
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001364307   ⟸   NM_001377378
- Peptide Label: isoform 3
RefSeq Acc Id: ENSP00000362512   ⟸   ENST00000373413
RefSeq Acc Id: ENSP00000355053   ⟸   ENST00000361328
RefSeq Acc Id: ENSP00000507139   ⟸   ENST00000684572
RefSeq Acc Id: XP_047285929   ⟸   XM_047429973
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047285930   ⟸   XM_047429974
- Peptide Label: isoform X5
RefSeq Acc Id: XP_047285927   ⟸   XM_047429971
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047285926   ⟸   XM_047429970
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047285928   ⟸   XM_047429972
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047285931   ⟸   XM_047429975
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054194589   ⟸   XM_054338614
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054194591   ⟸   XM_054338616
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054194593   ⟸   XM_054338618
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054194594   ⟸   XM_054338619
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054194595   ⟸   XM_054338620
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054194590   ⟸   XM_054338615
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054194592   ⟸   XM_054338617
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054194596   ⟸   XM_054338621
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054194597   ⟸   XM_054338622
- Peptide Label: isoform X6
Protein Domains
SCAN box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P17040-F1-model_v2 AlphaFold P17040 1-1043 view protein structure

Promoters
RGD ID:6854902
Promoter ID:EPDNEW_H616
Type:multiple initiation site
Name:ZSCAN20_1
Description:zinc finger and SCAN domain containing 20
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38133,472,651 - 33,472,711EPDNEW
RGD ID:6787295
Promoter ID:HG_KWN:1901
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000361328,   ENST00000373411,   NM_145238,   OTTHUMT00000012028,   UC001BXK.2,   UC009VUI.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36133,710,661 - 33,711,161 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:13093 AgrOrtholog
COSMIC ZSCAN20 COSMIC
Ensembl Genes ENSG00000121903 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000361328 ENTREZGENE
  ENST00000361328.7 UniProtKB/Swiss-Prot
  ENST00000373413.2 UniProtKB/Swiss-Prot
  ENST00000684572 ENTREZGENE
  ENST00000684572.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.4020.10 UniProtKB/Swiss-Prot
  Classic Zinc Finger UniProtKB/Swiss-Prot
  Homeodomain-like UniProtKB/Swiss-Prot
GTEx ENSG00000121903 GTEx
HGNC ID HGNC:13093 ENTREZGENE
Human Proteome Map ZSCAN20 Human Proteome Map
InterPro Myb_DNA-bind_4 UniProtKB/Swiss-Prot
  SANT/Myb UniProtKB/Swiss-Prot
  SCAN_dom UniProtKB/Swiss-Prot
  SCAN_sf UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:7579 UniProtKB/Swiss-Prot
NCBI Gene 7579 ENTREZGENE
OMIM 611315 OMIM
PANTHER ZINC FINGER PROTEIN UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN 879 UniProtKB/Swiss-Prot
Pfam Myb_DNA-bind_4 UniProtKB/Swiss-Prot
  SCAN UniProtKB/Swiss-Prot
  zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA37668 PharmGKB
PROSITE SCAN_BOX UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART SANT UniProtKB/Swiss-Prot
  SCAN UniProtKB/Swiss-Prot
  ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP Retrovirus capsid dimerization domain-like UniProtKB/Swiss-Prot
  SSF57667 UniProtKB/Swiss-Prot
UniProt A8K2D0 ENTREZGENE
  B1ALI4 ENTREZGENE
  B1ALI5 ENTREZGENE
  B1ALI6 ENTREZGENE
  P17040 ENTREZGENE
  Q6ZN23 ENTREZGENE
  Q96FA9 ENTREZGENE
  Q96H84 ENTREZGENE
  ZSC20_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A8K2D0 UniProtKB/Swiss-Prot
  B1ALI4 UniProtKB/Swiss-Prot
  B1ALI5 UniProtKB/Swiss-Prot
  B1ALI6 UniProtKB/Swiss-Prot
  Q6ZN23 UniProtKB/Swiss-Prot
  Q96FA9 UniProtKB/Swiss-Prot
  Q96H84 UniProtKB/Swiss-Prot