CEACAMP2 (CEA cell adhesion molecule pseudogene 2) - Rat Genome Database

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Gene: CEACAMP2 (CEA cell adhesion molecule pseudogene 2) Homo sapiens
Analyze
Symbol: CEACAMP2
Name: CEA cell adhesion molecule pseudogene 2
RGD ID: 1352759
HGNC Page HGNC:1824
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: carcinoembryonic antigen related cell adhesion molecule pseudogene 2; CEACAM23P; CGM9
Related Functional Gene: CEACAM1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381942,560,437 - 42,560,795 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1942,560,433 - 42,561,750 (-)EnsemblGRCh38hg38GRCh38
GRCh371943,064,589 - 43,064,947 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361947,756,459 - 47,756,747 (-)NCBINCBI36Build 36hg18NCBI36
Celera1939,865,403 - 39,865,691 (-)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1939,494,839 - 39,495,127 (-)NCBIHuRef
CHM1_11943,066,314 - 43,066,602 (-)NCBICHM1_1
T2T-CHM13v2.01945,379,846 - 45,380,204 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:1427854  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:284
Count of miRNA genes:267
Interacting mature miRNAs:282
Transcripts:ENST00000457904
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 2 4 4 1 2 2 9 2 4
Below cutoff 88 78 56 13 82 2 191 53 200 10 107 49 11 157 78

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000457904
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1942,560,433 - 42,561,750 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC CEACAMP2 COSMIC
Ensembl Genes ENSG00000230558 Ensembl
GTEx ENSG00000230558 GTEx
HGNC ID HGNC:1824 ENTREZGENE
Human Proteome Map CEACAMP2 Human Proteome Map
NCBI Gene 1091 ENTREZGENE
PharmGKB PA26368 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-27 CEACAMP2  CEA cell adhesion molecule pseudogene 2  CEACAMP2  carcinoembryonic antigen related cell adhesion molecule pseudogene 2  Symbol and/or name change 5135510 APPROVED
2016-01-19 CEACAMP2  carcinoembryonic antigen related cell adhesion molecule pseudogene 2    carcinoembryonic antigen-related cell adhesion molecule pseudogene 2  Symbol and/or name change 5135510 APPROVED