CNIH2 (cornichon family AMPA receptor auxiliary protein 2) - Rat Genome Database

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Gene: CNIH2 (cornichon family AMPA receptor auxiliary protein 2) Homo sapiens
Analyze
Symbol: CNIH2
Name: cornichon family AMPA receptor auxiliary protein 2
RGD ID: 1352659
HGNC Page HGNC:28744
Description: Predicted to be involved in negative regulation of anterograde synaptic vesicle transport and negative regulation of receptor localization to synapse. Predicted to act upstream of or within glutamatergic synaptic transmission; localization within membrane; and regulation of membrane potential. Predicted to be located in dendrite; postsynaptic density; and postsynaptic membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in dendrite; glutamatergic synapse; and postsynaptic density membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CNIH-2; Cnil; cornichon homolog 2; cornichon-like protein; MGC50896
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381166,278,175 - 66,284,206 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1166,278,175 - 66,285,301 (+)EnsemblGRCh38hg38GRCh38
GRCh371166,045,646 - 66,051,677 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,802,272 - 65,808,259 (+)NCBINCBI36Build 36hg18NCBI36
Build 341165,802,271 - 65,808,259NCBI
Celera1163,367,976 - 63,371,496 (+)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1162,361,871 - 62,376,861 (+)NCBIHuRef
CHM1_11165,929,773 - 65,935,793 (+)NCBICHM1_1
T2T-CHM13v2.01166,271,838 - 66,277,869 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:17207965   PMID:17229890   PMID:20805473   PMID:21172611   PMID:21343286   PMID:21543622   PMID:21873635   PMID:21926972   PMID:22211840   PMID:22815494   PMID:23103966  
PMID:24853943   PMID:32296183   PMID:36949045  


Genomics

Comparative Map Data
CNIH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381166,278,175 - 66,284,206 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1166,278,175 - 66,285,301 (+)EnsemblGRCh38hg38GRCh38
GRCh371166,045,646 - 66,051,677 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,802,272 - 65,808,259 (+)NCBINCBI36Build 36hg18NCBI36
Build 341165,802,271 - 65,808,259NCBI
Celera1163,367,976 - 63,371,496 (+)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1162,361,871 - 62,376,861 (+)NCBIHuRef
CHM1_11165,929,773 - 65,935,793 (+)NCBICHM1_1
T2T-CHM13v2.01166,271,838 - 66,277,869 (+)NCBIT2T-CHM13v2.0
Cnih2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,142,896 - 5,148,549 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,142,896 - 5,148,549 (-)EnsemblGRCm39 Ensembl
GRCm38195,092,868 - 5,098,521 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,092,868 - 5,098,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,092,871 - 5,098,418 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,092,871 - 5,098,418 (-)NCBIMGSCv36mm8
Celera194,962,069 - 4,967,624 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.24NCBI
Cnih2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81211,828,791 - 211,834,474 (-)NCBIGRCr8
mRatBN7.21202,399,416 - 202,405,110 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,399,419 - 202,405,089 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1210,752,476 - 210,758,122 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01217,844,858 - 217,850,504 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,535,892 - 210,541,538 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01220,474,485 - 220,480,723 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1220,474,493 - 220,480,132 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01227,405,539 - 227,411,210 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,715,692 - 207,717,588 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11207,869,147 - 207,871,037 (-)NCBI
Celera1199,939,495 - 199,944,513 (-)NCBICelera
Cytogenetic Map1q43NCBI
Cnih2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542219,033,201 - 19,035,138 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542219,033,201 - 19,035,135 (-)NCBIChiLan1.0ChiLan1.0
CNIH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2967,511,975 - 67,517,994 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11168,554,850 - 68,560,863 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01161,643,633 - 61,649,646 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,969,447 - 64,975,156 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,969,447 - 64,975,156 (+)Ensemblpanpan1.1panPan2
CNIH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,020,263 - 51,026,280 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,021,116 - 51,026,273 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1849,628,921 - 49,634,836 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,058,624 - 52,064,534 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,059,259 - 52,064,720 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,158,624 - 51,164,533 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01850,732,786 - 50,738,700 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,522,930 - 51,528,840 (-)NCBIUU_Cfam_GSD_1.0
Cnih2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049476,868,527 - 6,874,251 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,310,872 - 3,316,573 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,310,873 - 3,316,575 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNIH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.126,102,347 - 6,109,424 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,178,633 - 5,184,482 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CNIH2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.117,982,685 - 7,988,834 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl17,982,700 - 7,988,753 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038105,264,377 - 105,270,384 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cnih2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476720,084,501 - 20,090,209 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476720,084,526 - 20,090,225 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CNIH2
4 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11q13.2(chr11:66193502-67890770)x3 copy number gain See cases [RCV000053623] Chr11:66193502..67890770 [GRCh38]
Chr11:65960973..67658241 [GRCh37]
Chr11:65717549..67414817 [NCBI36]
Chr11:11q13.2		 pathogenic
GRCh38/hg38 11q13.1-13.2(chr11:65741431-67705669)x1 copy number loss See cases [RCV000142881] Chr11:65741431..67705669 [GRCh38]
Chr11:65508902..67473140 [GRCh37]
Chr11:65265478..67229716 [NCBI36]
Chr11:11q13.1-13.2		 pathogenic
GRCh37/hg19 11q13.2(chr11:66024774-67430781)x3 copy number gain See cases [RCV000240374] Chr11:66024774..67430781 [GRCh37]
Chr11:11q13.2		 uncertain significance
GRCh37/hg19 11q13.1-13.2(chr11:64501919-67129258)x3 copy number gain See cases [RCV000511632] Chr11:64501919..67129258 [GRCh37]
Chr11:11q13.1-13.2		 likely pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11q13.2(chr11:65906060-66086140)x1 copy number loss not provided [RCV000683313] Chr11:65906060..66086140 [GRCh37]
Chr11:11q13.2		 uncertain significance
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
NM_182553.3(CNIH2):c.133G>A (p.Gly45Arg) single nucleotide variant not specified [RCV004314613] Chr11:66282310 [GRCh38]
Chr11:66049781 [GRCh37]
Chr11:11q13.2		 uncertain significance
NM_182553.3(CNIH2):c.21G>A (p.Ala7=) single nucleotide variant not provided [RCV000948867] Chr11:66278477 [GRCh38]
Chr11:66045948 [GRCh37]
Chr11:11q13.2		 benign
GRCh37/hg19 11q13.1-13.2(chr11:65138976-67574402) copy number gain not provided [RCV000767601] Chr11:65138976..67574402 [GRCh37]
Chr11:11q13.1-13.2		 pathogenic
NC_000011.9:g.(?_65633902)_(66115026_?)dup duplication Cutis laxa, autosomal recessive, type 1B [RCV000798155] Chr11:65866431..66347555 [GRCh38]
Chr11:65633902..66115026 [GRCh37]
Chr11:11q13.1-13.2		 uncertain significance
NC_000011.9:g.(?_64973914)_(70052579_?)dup duplication Aicardi-Goutieres syndrome 3 [RCV003113322]|FADD-related immunodeficiency [RCV003107753] Chr11:64973914..70052579 [GRCh37]
Chr11:11q13.1-13.3		 uncertain significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3		 pathogenic
NC_000011.9:g.(?_65633902)_(66115026_?)dup duplication Autosomal recessive cutis laxa type 1B [RCV001305354] Chr11:65633902..66115026 [GRCh37]
Chr11:11q13.1-13.2		 uncertain significance
NC_000011.9:g.(?_59596957)_(68707199_?)dup duplication Familial temporal lobe epilepsy 8 [RCV001372442] Chr11:59596957..68707199 [GRCh37]
Chr11:11q12.1-13.3		 uncertain significance
GRCh37/hg19 11q13.2(chr11:65963737-66581485)x1 copy number loss not provided [RCV001827874] Chr11:65963737..66581485 [GRCh37]
Chr11:11q13.2		 uncertain significance
GRCh37/hg19 11q13.1-13.2(chr11:64935724-66405514) copy number loss not specified [RCV002052930] Chr11:64935724..66405514 [GRCh37]
Chr11:11q13.1-13.2		 uncertain significance
NC_000011.9:g.(?_64522783)_(66283694_?)del deletion Bardet-Biedl syndrome [RCV002014493]|Glycogen storage disease, type V [RCV002004587] Chr11:64522783..66283694 [GRCh37]
Chr11:11q13.1-13.2		 pathogenic
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25		 pathogenic
GRCh37/hg19 11q12.2-13.5(chr11:59923608-76272324)x3 copy number gain not provided [RCV003484842] Chr11:59923608..76272324 [GRCh37]
Chr11:11q12.2-13.5		 pathogenic
GRCh37/hg19 11q12.1-13.3(chr11:56895955-69295402)x3 copy number gain not specified [RCV003986944] Chr11:56895955..69295402 [GRCh37]
Chr11:11q12.1-13.3		 likely pathogenic
NM_182553.3(CNIH2):c.175C>G (p.Arg59Gly) single nucleotide variant not specified [RCV004439856] Chr11:66282757 [GRCh38]
Chr11:66050228 [GRCh37]
Chr11:11q13.2		 uncertain significance
NM_182553.3(CNIH2):c.25T>C (p.Cys9Arg) single nucleotide variant not specified [RCV004439857] Chr11:66278481 [GRCh38]
Chr11:66045952 [GRCh37]
Chr11:11q13.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3109
Count of miRNA genes:773
Interacting mature miRNAs:952
Transcripts:ENST00000311445, ENST00000528063, ENST00000528852, ENST00000530519, ENST00000531936, ENST00000534826
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
WI-14316  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371166,051,530 - 66,051,658UniSTSGRCh37
Build 361165,808,106 - 65,808,234RGDNCBI36
Celera1163,371,343 - 63,371,471RGD
Cytogenetic Map11q13.2UniSTS
HuRef1162,376,706 - 62,376,834UniSTS
GeneMap99-GB4 RH Map11244.55UniSTS
Whitehead-RH Map11328.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High 1
Medium 6 298 3 18 3 198 25 2939 11 310 80 2 3 1
Low 2131 1725 1009 298 1574 187 3065 778 776 238 1088 1451 126 1 995 1819 4
Below cutoff 300 1249 410 314 339 268 1054 1339 18 162 56 79 46 209 927 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000311445   ⟹   ENSP00000310003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,278,175 - 66,284,206 (+)Ensembl
RefSeq Acc Id: ENST00000528063   ⟹   ENSP00000435537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,278,342 - 66,284,115 (+)Ensembl
RefSeq Acc Id: ENST00000528852   ⟹   ENSP00000432177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,278,190 - 66,284,193 (+)Ensembl
RefSeq Acc Id: ENST00000530519
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,278,462 - 66,285,301 (+)Ensembl
RefSeq Acc Id: ENST00000531936
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,282,594 - 66,283,750 (+)Ensembl
RefSeq Acc Id: ENST00000534826   ⟹   ENSP00000433896
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1166,278,236 - 66,282,771 (+)Ensembl
RefSeq Acc Id: NM_182553   ⟹   NP_872359
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381166,278,175 - 66,284,206 (+)NCBI
GRCh371166,045,672 - 66,051,685 (+)NCBI
Build 361165,802,272 - 65,808,259 (+)NCBI Archive
Celera1163,367,976 - 63,371,496 (+)RGD
HuRef1162,361,871 - 62,376,861 (+)NCBI
CHM1_11165,929,773 - 65,935,793 (+)NCBI
T2T-CHM13v2.01166,271,838 - 66,277,869 (+)NCBI
Sequence:
RefSeq Acc Id: NR_073078
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381166,278,175 - 66,284,206 (+)NCBI
GRCh371166,045,672 - 66,051,685 (+)NCBI
HuRef1162,361,871 - 62,376,861 (+)NCBI
CHM1_11165,929,773 - 65,935,793 (+)NCBI
T2T-CHM13v2.01166,271,838 - 66,277,869 (+)NCBI
Sequence:
RefSeq Acc Id: NR_073079
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381166,278,175 - 66,284,206 (+)NCBI
GRCh371166,045,672 - 66,051,685 (+)NCBI
HuRef1162,361,871 - 62,376,861 (+)NCBI
CHM1_11165,929,773 - 65,935,793 (+)NCBI
T2T-CHM13v2.01166,271,838 - 66,277,869 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047426708   ⟹   XP_047282664
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381166,278,509 - 66,284,206 (+)NCBI
RefSeq Acc Id: XM_054368301   ⟹   XP_054224276
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01166,272,598 - 66,277,869 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_872359   ⟸   NM_182553
- UniProtKB: Q6PI25 (UniProtKB/Swiss-Prot),   E9PS15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000433896   ⟸   ENST00000534826
RefSeq Acc Id: ENSP00000310003   ⟸   ENST00000311445
RefSeq Acc Id: ENSP00000435537   ⟸   ENST00000528063
RefSeq Acc Id: ENSP00000432177   ⟸   ENST00000528852
RefSeq Acc Id: XP_047282664   ⟸   XM_047426708
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054224276   ⟸   XM_054368301
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6PI25-F1-model_v2 AlphaFold Q6PI25 1-160 view protein structure

Promoters
RGD ID:6788633
Promoter ID:HG_KWN:13390
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_182553,   UC001OHH.1,   UC009YRB.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361165,801,716 - 65,802,216 (+)MPROMDB
RGD ID:7221133
Promoter ID:EPDNEW_H16311
Type:initiation region
Name:CNIH2_1
Description:cornichon family AMPA receptor auxiliary protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381166,278,196 - 66,278,256EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:28744 AgrOrtholog
COSMIC CNIH2 COSMIC
Ensembl Genes ENSG00000174871 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000311445 ENTREZGENE
  ENST00000311445.7 UniProtKB/Swiss-Prot
  ENST00000528063 ENTREZGENE
  ENST00000528063.5 UniProtKB/TrEMBL
  ENST00000528852.5 UniProtKB/TrEMBL
  ENST00000534826.5 UniProtKB/TrEMBL
GTEx ENSG00000174871 GTEx
HGNC ID HGNC:28744 ENTREZGENE
Human Proteome Map CNIH2 Human Proteome Map
InterPro Cornichon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cornichon_conserved UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:254263 UniProtKB/Swiss-Prot
NCBI Gene 254263 ENTREZGENE
OMIM 611288 OMIM
PANTHER CORNICHON-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN CORNICHON HOMOLOG 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cornichon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134887358 PharmGKB
PROSITE CORNICHON UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Cornichon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CNIH2_HUMAN UniProtKB/Swiss-Prot
  E9PIT8_HUMAN UniProtKB/TrEMBL
  E9PJQ8_HUMAN UniProtKB/TrEMBL
  E9PS15 ENTREZGENE, UniProtKB/TrEMBL
  Q6PI25 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-03 CNIH2  cornichon family AMPA receptor auxiliary protein 2  CNIH2  cornichon homolog 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED