EEF1A1P7 (eukaryotic translation elongation factor 1 alpha 1 pseudogene 7) - Rat Genome Database

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Gene: EEF1A1P7 (eukaryotic translation elongation factor 1 alpha 1 pseudogene 7) Homo sapiens
Analyze
Symbol: EEF1A1P7
Name: eukaryotic translation elongation factor 1 alpha 1 pseudogene 7
RGD ID: 1352171
HGNC Page HGNC:3202
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EEF1AL5
Related Functional Gene: EEF1A1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,382,112 - 35,384,253 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,382,172 - 35,384,052 (+)EnsemblGRCh38hg38GRCh38
GRCh371935,873,014 - 35,875,155 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,564,914 - 40,566,797 (+)NCBINCBI36Build 36hg18NCBI36
Celera1932,586,537 - 32,588,420 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,380,140 - 32,382,023 (+)NCBIHuRef
CHM1_11935,874,666 - 35,876,549 (+)NCBICHM1_1
T2T-CHM13v2.01937,926,819 - 37,928,960 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:8812466  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:90
Count of miRNA genes:90
Interacting mature miRNAs:90
Transcripts:ENST00000596811
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 115 178 108 13 186 8 320 41 89 83 144 201 5 95 212 1
Below cutoff 2122 2552 1378 437 1406 288 3628 1781 2996 238 1124 1196 151 1087 2355 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000596811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1935,382,172 - 35,384,052 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC EEF1A1P7 COSMIC
Ensembl Genes ENSG00000268222 Ensembl
GTEx ENSG00000268222 GTEx
HGNC ID HGNC:3202 ENTREZGENE
Human Proteome Map EEF1A1P7 Human Proteome Map
NCBI Gene 390924 ENTREZGENE
PharmGKB PA27638 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 EEF1A1P7  eukaryotic translation elongation factor 1 alpha 1 pseudogene 7  EEF1AL5  eukaryotic translation elongation factor 1 alpha-like 5 pseudogene  Symbol and/or name change 5135510 APPROVED