ZNF512 (zinc finger protein 512) - Rat Genome Database

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Gene: ZNF512 (zinc finger protein 512) Homo sapiens
Analyze
Symbol: ZNF512
Name: zinc finger protein 512
RGD ID: 1349628
HGNC Page HGNC:29380
Description: Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: FLJ51176; KIAA1805; MGC111046
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,583,042 - 27,623,217 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,582,969 - 27,623,217 (+)EnsemblGRCh38hg38GRCh38
GRCh37227,805,909 - 27,846,084 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,659,397 - 27,699,467 (+)NCBINCBI36Build 36hg18NCBI36
Build 34227,717,543 - 27,757,613NCBI
Celera227,651,321 - 27,691,419 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,547,522 - 27,587,728 (+)NCBIHuRef
CHM1_1227,736,569 - 27,776,818 (+)NCBICHM1_1
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:11347906   PMID:14702039   PMID:15342556   PMID:17210253   PMID:19454010   PMID:20602751   PMID:21386085   PMID:21873635   PMID:22359512   PMID:22586326   PMID:23362303   PMID:23505323  
PMID:24457600   PMID:24981860   PMID:25281560   PMID:25693804   PMID:26186194   PMID:26496610   PMID:27114546   PMID:27248496   PMID:27301951   PMID:27505670   PMID:27880917   PMID:28514442  
PMID:28611094   PMID:28611215   PMID:28712289   PMID:28977666   PMID:29128334   PMID:29180619   PMID:29467282   PMID:29509190   PMID:29568061   PMID:30209976   PMID:30462309   PMID:30463901  
PMID:30471916   PMID:30554943   PMID:30567526   PMID:30585729   PMID:30948266   PMID:31091453   PMID:31182584   PMID:31665637   PMID:32296183   PMID:32513696   PMID:32807901   PMID:32877691  
PMID:33301849   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34349018   PMID:34673265   PMID:34780483   PMID:35013218   PMID:35140242   PMID:35241646   PMID:35256949   PMID:35271311  
PMID:35384245   PMID:35439318   PMID:35509820   PMID:35652658   PMID:35944360   PMID:36089195   PMID:36215168   PMID:36232890   PMID:36373674   PMID:36537216   PMID:36779763   PMID:36912080  
PMID:37616343   PMID:37689310   PMID:37827155  


Genomics

Comparative Map Data
ZNF512
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,583,042 - 27,623,217 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,582,969 - 27,623,217 (+)EnsemblGRCh38hg38GRCh38
GRCh37227,805,909 - 27,846,084 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,659,397 - 27,699,467 (+)NCBINCBI36Build 36hg18NCBI36
Build 34227,717,543 - 27,757,613NCBI
Celera227,651,321 - 27,691,419 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,547,522 - 27,587,728 (+)NCBIHuRef
CHM1_1227,736,569 - 27,776,818 (+)NCBICHM1_1
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBIT2T-CHM13v2.0
Zfp512
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,609,742 - 31,639,098 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,609,775 - 31,639,098 (+)EnsemblGRCm39 Ensembl
GRCm38531,452,421 - 31,481,754 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl531,452,431 - 31,481,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv37531,754,809 - 31,784,127 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,729,071 - 31,758,330 (+)NCBIMGSCv36mm8
Celera528,931,284 - 28,960,509 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.27NCBI
Zfp512
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,696,889 - 30,727,895 (-)NCBIGRCr8
mRatBN7.2624,976,903 - 25,007,913 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl624,976,906 - 25,007,819 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0626,284,749 - 26,314,841 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,284,748 - 26,314,844 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,108,033 - 36,137,831 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,036,876 - 25,053,744 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera624,471,421 - 24,502,047 (-)NCBICelera
Cytogenetic Map6q14NCBI
Znf512
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,525,637 - 9,569,412 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,525,501 - 9,571,050 (+)NCBIChiLan1.0ChiLan1.0
ZNF512
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21298,893,161 - 98,933,138 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A98,897,008 - 98,937,107 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A27,580,956 - 27,620,982 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A27,667,868 - 27,707,230 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,667,868 - 27,707,230 (+)Ensemblpanpan1.1panPan2
ZNF512
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,505,564 - 21,538,961 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,505,655 - 21,646,364 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1721,396,679 - 21,442,788 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,887,263 - 21,920,721 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,887,320 - 21,921,376 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,506,681 - 21,543,265 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,521,764 - 21,554,924 (+)NCBIUNSW_CanFamBas_1.0
Znf512
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,808,489 - 65,841,939 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364934,997,296 - 5,031,071 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364934,997,626 - 5,031,092 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF512
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,572,425 - 111,605,793 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,572,423 - 111,605,830 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23118,538,975 - 118,572,968 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF512
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,012,582 - 80,051,404 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1480,011,536 - 80,051,408 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604532,105,514 - 32,144,199 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf512
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,601,572 - 9,634,576 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,601,342 - 9,636,207 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF512
15 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2p25.3-23.1(chr2:30141-31766749)x3 copy number gain See cases [RCV000052929] Chr2:30141..31766749 [GRCh38]
Chr2:30141..31991818 [GRCh37]
Chr2:20141..31845322 [NCBI36]
Chr2:2p25.3-23.1		 pathogenic
GRCh38/hg38 2p25.3-16.1(chr2:66097-55570637)x3 copy number gain See cases [RCV000052933] Chr2:66097..55570637 [GRCh38]
Chr2:66097..55797773 [GRCh37]
Chr2:56097..55651277 [NCBI36]
Chr2:2p25.3-16.1		 pathogenic
NM_032266.3(C2orf16):c.2778G>A (p.Gln926=) single nucleotide variant Malignant melanoma [RCV000060541] Chr2:27579350 [GRCh38]
Chr2:27802217 [GRCh37]
Chr2:27655721 [NCBI36]
Chr2:2p23.3		 not provided
NM_032266.3(C2orf16):c.2699G>A (p.Gly900Glu) single nucleotide variant Malignant melanoma [RCV000065536] Chr2:27579271 [GRCh38]
Chr2:27802138 [GRCh37]
Chr2:27655642 [NCBI36]
Chr2:2p23.3		 not provided
NM_032266.3(C2orf16):c.2710G>A (p.Glu904Lys) single nucleotide variant Malignant melanoma [RCV000065537] Chr2:27579282 [GRCh38]
Chr2:27802149 [GRCh37]
Chr2:27655653 [NCBI36]
Chr2:2p23.3		 not provided
NM_032266.3(C2orf16):c.3817G>A (p.Glu1273Lys) single nucleotide variant Malignant melanoma [RCV000065538] Chr2:27580389 [GRCh38]
Chr2:27803256 [GRCh37]
Chr2:27656760 [NCBI36]
Chr2:2p23.3		 not provided
NM_032266.3(C2orf16):c.4519G>A (p.Gly1507Arg) single nucleotide variant Malignant melanoma [RCV000065539] Chr2:27581091 [GRCh38]
Chr2:27803958 [GRCh37]
Chr2:27657462 [NCBI36]
Chr2:2p23.3		 not provided
NM_032266.3(C2orf16):c.4785G>A (p.Arg1595=) single nucleotide variant Malignant melanoma [RCV000065540] Chr2:27581357 [GRCh38]
Chr2:27804224 [GRCh37]
Chr2:27657728 [NCBI36]
Chr2:2p23.3		 not provided
GRCh38/hg38 2p25.3-23.2(chr2:30341-28419664)x3 copy number gain See cases [RCV000135398] Chr2:30341..28419664 [GRCh38]
Chr2:30341..28642531 [GRCh37]
Chr2:20341..28496035 [NCBI36]
Chr2:2p25.3-23.2		 pathogenic
GRCh38/hg38 2p25.3-22.3(chr2:12770-33711509)x3 copy number gain See cases [RCV000141829] Chr2:12770..33711509 [GRCh38]
Chr2:12770..33936576 [GRCh37]
Chr2:2770..33790080 [NCBI36]
Chr2:2p25.3-22.3		 pathogenic
GRCh38/hg38 2p25.1-11.2(chr2:7495123-87705899)x3 copy number gain See cases [RCV000141494] Chr2:7495123..87705899 [GRCh38]
Chr2:7635254..88005418 [GRCh37]
Chr2:7552705..87786533 [NCBI36]
Chr2:2p25.1-11.2		 benign
GRCh38/hg38 2p24.1-23.2(chr2:22579652-28525186)x1 copy number loss See cases [RCV000142071] Chr2:22579652..28525186 [GRCh38]
Chr2:22802524..28748053 [GRCh37]
Chr2:22656029..28601557 [NCBI36]
Chr2:2p24.1-23.2		 pathogenic
GRCh38/hg38 2p25.3-21(chr2:236816-45983232)x3 copy number gain See cases [RCV000143682] Chr2:236816..45983232 [GRCh38]
Chr2:236816..46210371 [GRCh37]
Chr2:226816..46063875 [NCBI36]
Chr2:2p25.3-21		 pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
NM_032434.4(ZNF512):c.1002T>G (p.Ser334Arg) single nucleotide variant not specified [RCV004294433] Chr2:27607910 [GRCh38]
Chr2:27830777 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.302G>A (p.Gly101Glu) single nucleotide variant not specified [RCV004325555] Chr2:27599607 [GRCh38]
Chr2:27822474 [GRCh37]
Chr2:2p23.3		 uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
GRCh37/hg19 2p24.1-16.3(chr2:22665048-52850368)x3 copy number gain not provided [RCV000752875] Chr2:22665048..52850368 [GRCh37]
Chr2:2p24.1-16.3		 pathogenic
GRCh37/hg19 2p23.3-21(chr2:24601818-43466284)x3 copy number gain See cases [RCV001581099] Chr2:24601818..43466284 [GRCh37]
Chr2:2p23.3-21		 pathogenic
GRCh37/hg19 2p23.3-21(chr2:24881528-43460021)x3 copy number gain not provided [RCV001532444] Chr2:24881528..43460021 [GRCh37]
Chr2:2p23.3-21		 likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
NC_000002.11:g.(?_24443763)_(29022169_?)dup duplication Tatton-Brown-Rahman overgrowth syndrome [RCV003113871]|not provided [RCV003113870] Chr2:24443763..29022169 [GRCh37]
Chr2:2p23.3-23.2		 uncertain significance|no classifications from unflagged records
NC_000002.11:g.(?_24443763)_(30143525_?)dup duplication not provided [RCV003113441] Chr2:24443763..30143525 [GRCh37]
Chr2:2p23.3-23.1		 uncertain significance
NM_032434.4(ZNF512):c.1310C>T (p.Ala437Val) single nucleotide variant not specified [RCV004290734] Chr2:27617486 [GRCh38]
Chr2:27840353 [GRCh37]
Chr2:2p23.3		 uncertain significance
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13		 pathogenic
NM_032434.4(ZNF512):c.1367A>G (p.Lys456Arg) single nucleotide variant not specified [RCV004313956] Chr2:27617543 [GRCh38]
Chr2:27840410 [GRCh37]
Chr2:2p23.3		 uncertain significance
GRCh37/hg19 2p25.3-22.3(chr2:706460-35523639)x3 copy number gain not provided [RCV002473946] Chr2:706460..35523639 [GRCh37]
Chr2:2p25.3-22.3		 pathogenic
NM_032434.4(ZNF512):c.961C>G (p.Gln321Glu) single nucleotide variant not specified [RCV004237560] Chr2:27607869 [GRCh38]
Chr2:27830736 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.600T>A (p.His200Gln) single nucleotide variant not specified [RCV004128712] Chr2:27601373 [GRCh38]
Chr2:27824240 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.1001G>A (p.Ser334Asn) single nucleotide variant not specified [RCV004195839] Chr2:27607909 [GRCh38]
Chr2:27830776 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.136A>G (p.Ile46Val) single nucleotide variant not specified [RCV004137281] Chr2:27598113 [GRCh38]
Chr2:27820980 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.269A>G (p.His90Arg) single nucleotide variant not specified [RCV004076822] Chr2:27598246 [GRCh38]
Chr2:27821113 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.1405G>A (p.Val469Ile) single nucleotide variant not specified [RCV004249989] Chr2:27621162 [GRCh38]
Chr2:27844029 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.301G>C (p.Gly101Arg) single nucleotide variant not specified [RCV004262603] Chr2:27599606 [GRCh38]
Chr2:27822473 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.1549A>G (p.Thr517Ala) single nucleotide variant not specified [RCV004492169] Chr2:27621306 [GRCh38]
Chr2:27844173 [GRCh37]
Chr2:2p23.3		 likely benign
GRCh37/hg19 2p25.3-22.3(chr2:12771-35541353)x3 copy number gain See cases [RCV004442780] Chr2:12771..35541353 [GRCh37]
Chr2:2p25.3-22.3		 pathogenic
NM_032434.4(ZNF512):c.1213C>T (p.Arg405Cys) single nucleotide variant not specified [RCV004492167] Chr2:27615249 [GRCh38]
Chr2:27838116 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.1520G>A (p.Arg507Gln) single nucleotide variant not specified [RCV004492168] Chr2:27621277 [GRCh38]
Chr2:27844144 [GRCh37]
Chr2:2p23.3		 uncertain significance
NM_032434.4(ZNF512):c.770G>C (p.Ser257Thr) single nucleotide variant not specified [RCV004492170] Chr2:27603141 [GRCh38]
Chr2:27826008 [GRCh37]
Chr2:2p23.3		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2075
Count of miRNA genes:779
Interacting mature miRNAs:889
Transcripts:ENST00000355467, ENST00000379717, ENST00000413371, ENST00000416005, ENST00000461705, ENST00000488055, ENST00000494548, ENST00000556601
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH80494  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37227,845,732 - 27,845,937UniSTSGRCh37
Build 36227,699,236 - 27,699,441RGDNCBI36
Celera227,691,188 - 27,691,393RGD
Cytogenetic Map2p23UniSTS
HuRef227,587,378 - 27,587,583UniSTS
GeneMap99-GB4 RH Map297.89UniSTS
RH118581  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37227,839,331 - 27,839,608UniSTSGRCh37
Build 36227,692,835 - 27,693,112RGDNCBI36
Celera227,684,782 - 27,685,059RGD
Cytogenetic Map2p23UniSTS
HuRef227,580,972 - 27,581,249UniSTS
TNG Radiation Hybrid Map220005.0UniSTS
SHGC-111186  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37227,813,511 - 27,813,795UniSTSGRCh37
Build 36227,667,015 - 27,667,299RGDNCBI36
Celera227,658,948 - 27,659,232RGD
Cytogenetic Map2p23UniSTS
HuRef227,555,016 - 27,555,300UniSTS
TNG Radiation Hybrid Map220014.0UniSTS
RH35836  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37227,845,719 - 27,845,866UniSTSGRCh37
Build 36227,699,223 - 27,699,370RGDNCBI36
Celera227,691,175 - 27,691,322RGD
Cytogenetic Map2p23UniSTS
HuRef227,587,365 - 27,587,512UniSTS
GeneMap99-GB4 RH Map297.89UniSTS
SHGC-52592  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37227,806,726 - 27,806,916UniSTSGRCh37
Build 36227,660,230 - 27,660,420RGDNCBI36
Celera227,652,154 - 27,652,344RGD
Cytogenetic Map2p23UniSTS
HuRef227,548,412 - 27,548,602UniSTS
TNG Radiation Hybrid Map220023.0UniSTS
GeneMap99-G3 RH Map21200.0UniSTS
STS-Z41731  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2p23UniSTS
GeneMap99-GB4 RH Map297.59UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2297 1927 1358 260 1353 109 3415 1134 3266 293 1409 1573 167 1 1153 1990 1 1
Low 133 1063 367 363 597 355 942 1062 468 126 45 38 8 51 798 4 1
Below cutoff 3 1 1 1 2 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001271286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_032434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB058708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC074091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL514772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC093041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF593724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG720805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP251717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000355467   ⟹   ENSP00000347648
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,583,042 - 27,623,217 (+)Ensembl
RefSeq Acc Id: ENST00000379717   ⟹   ENSP00000369040
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,583,030 - 27,623,094 (+)Ensembl
RefSeq Acc Id: ENST00000413371   ⟹   ENSP00000395660
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,582,969 - 27,623,215 (+)Ensembl
RefSeq Acc Id: ENST00000416005   ⟹   ENSP00000407038
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,582,969 - 27,623,215 (+)Ensembl
RefSeq Acc Id: ENST00000461705
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,583,284 - 27,598,187 (+)Ensembl
RefSeq Acc Id: ENST00000488055
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,617,051 - 27,623,096 (+)Ensembl
RefSeq Acc Id: ENST00000494548
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,583,044 - 27,600,728 (+)Ensembl
RefSeq Acc Id: ENST00000556601   ⟹   ENSP00000451572
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl227,582,969 - 27,623,215 (+)Ensembl
RefSeq Acc Id: NM_001271286   ⟹   NP_001258215
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271287   ⟹   NP_001258216
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271288   ⟹   NP_001258217
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271289   ⟹   NP_001258218
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271318   ⟹   NP_001258247
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
RefSeq Acc Id: NM_032434   ⟹   NP_115810
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,042 - 27,623,217 (+)NCBI
GRCh37227,805,836 - 27,846,082 (+)NCBI
Build 36227,659,397 - 27,699,467 (+)NCBI Archive
Celera227,651,321 - 27,691,419 (+)RGD
HuRef227,547,522 - 27,587,728 (+)NCBI
CHM1_1227,736,569 - 27,776,818 (+)NCBI
T2T-CHM13v2.0227,626,128 - 27,666,302 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_115810   ⟸   NM_032434
- Peptide Label: isoform a
- UniProtKB: Q86XK6 (UniProtKB/Swiss-Prot),   Q53RZ7 (UniProtKB/Swiss-Prot),   B4DSM5 (UniProtKB/Swiss-Prot),   Q96JM0 (UniProtKB/Swiss-Prot),   Q96ME7 (UniProtKB/Swiss-Prot),   B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258247   ⟸   NM_001271318
- Peptide Label: isoform c
- UniProtKB: B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258215   ⟸   NM_001271286
- Peptide Label: isoform b
- UniProtKB: B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258216   ⟸   NM_001271287
- Peptide Label: isoform c
- UniProtKB: B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258217   ⟸   NM_001271288
- Peptide Label: isoform c
- UniProtKB: B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258218   ⟸   NM_001271289
- Peptide Label: isoform d
- UniProtKB: B4DES6 (UniProtKB/TrEMBL),   B7Z9P6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000451572   ⟸   ENST00000556601
RefSeq Acc Id: ENSP00000395660   ⟸   ENST00000413371
RefSeq Acc Id: ENSP00000407038   ⟸   ENST00000416005
RefSeq Acc Id: ENSP00000369040   ⟸   ENST00000379717
RefSeq Acc Id: ENSP00000347648   ⟸   ENST00000355467
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96ME7-F1-model_v2 AlphaFold Q96ME7 1-567 view protein structure

Promoters
RGD ID:6859948
Promoter ID:EPDNEW_H3139
Type:initiation region
Name:ZNF512_1
Description:zinc finger protein 512
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38227,583,046 - 27,583,106EPDNEW
RGD ID:6797080
Promoter ID:HG_KWN:31980
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000379717,   NM_032434,   OTTHUMT00000324574,   OTTHUMT00000324575,   UC002RLB.1,   UC002RLC.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36227,659,204 - 27,659,704 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29380 AgrOrtholog
COSMIC ZNF512 COSMIC
Ensembl Genes ENSG00000243943 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000355467 ENTREZGENE
  ENST00000355467.6 UniProtKB/Swiss-Prot
  ENST00000379717.5 UniProtKB/TrEMBL
  ENST00000413371 ENTREZGENE
  ENST00000413371.6 UniProtKB/Swiss-Prot
  ENST00000416005 ENTREZGENE
  ENST00000416005.6 UniProtKB/Swiss-Prot
  ENST00000556601 ENTREZGENE
  ENST00000556601.5 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000243943 GTEx
HGNC ID HGNC:29380 ENTREZGENE
Human Proteome Map ZNF512 Human Proteome Map
InterPro ZNF512_C2HC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZNF512_znf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:84450 UniProtKB/Swiss-Prot
NCBI Gene 84450 ENTREZGENE
PANTHER ZINC FINGER PROTEIN 512 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZNF512_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZNF512_zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134896861 PharmGKB
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B4DES6 ENTREZGENE, UniProtKB/TrEMBL
  B4DSM5 ENTREZGENE
  B7Z9P6 ENTREZGENE, UniProtKB/TrEMBL
  G3XAG1_HUMAN UniProtKB/TrEMBL
  Q53RZ7 ENTREZGENE
  Q86XK6 ENTREZGENE
  Q96JM0 ENTREZGENE
  Q96ME7 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B4DSM5 UniProtKB/Swiss-Prot
  Q53RZ7 UniProtKB/Swiss-Prot
  Q86XK6 UniProtKB/Swiss-Prot
  Q96JM0 UniProtKB/Swiss-Prot