EEF1A1P8 (eukaryotic translation elongation factor 1 alpha 1 pseudogene 8) - Rat Genome Database

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Gene: EEF1A1P8 (eukaryotic translation elongation factor 1 alpha 1 pseudogene 8) Homo sapiens
Analyze
Symbol: EEF1A1P8
Name: eukaryotic translation elongation factor 1 alpha 1 pseudogene 8
RGD ID: 1349405
HGNC Page HGNC:3203
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EEF1AL6
Related Functional Gene: EEF1A1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383184,026,169 - 184,027,812 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3184,026,369 - 184,027,756 (-)EnsemblGRCh38hg38GRCh38
GRCh373183,743,957 - 183,745,600 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363185,226,850 - 185,228,237 (-)NCBINCBI36Build 36hg18NCBI36
Celera3182,186,972 - 182,188,359 (-)NCBICelera
Cytogenetic Map3q27.1NCBI
HuRef3181,151,748 - 181,153,135 (-)NCBIHuRef
CHM1_13183,708,301 - 183,709,688 (-)NCBICHM1_1
T2T-CHM13v2.03186,835,710 - 186,837,353 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:8812466  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:175
Count of miRNA genes:173
Interacting mature miRNAs:174
Transcripts:ENST00000419025
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1 1 1 4 4 5 1
Low 287 290 228 17 329 9 735 111 452 61 321 351 13 1 200 400 3 1
Below cutoff 2070 2499 1317 442 1449 293 3422 1828 3176 274 1084 1190 159 990 2225 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000419025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3184,026,369 - 184,027,756 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC EEF1A1P8 COSMIC
Ensembl Genes ENSG00000223529 Ensembl, ENTREZGENE
GTEx ENSG00000223529 GTEx
HGNC ID HGNC:3203 ENTREZGENE
Human Proteome Map EEF1A1P8 Human Proteome Map
NCBI Gene 389179 ENTREZGENE
PharmGKB PA27639 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 EEF1A1P8  eukaryotic translation elongation factor 1 alpha 1 pseudogene 8  EEF1AL6  eukaryotic translation elongation factor 1 alpha-like 6 pseudogene  Symbol and/or name change 5135510 APPROVED