Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | DTX3 | Human | Breast Neoplasms | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25151356 | |
|
Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | DTX3 | Human | Breast Neoplasms | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25151356 | |
|
|
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
3. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:7671825 | PMID:11226752 | PMID:12477932 | PMID:12670957 | PMID:14702039 | PMID:16344560 | PMID:17028573 | PMID:19549727 | PMID:21873635 | PMID:22493164 | PMID:23105109 | PMID:23503679 |
PMID:24705354 | PMID:25416956 | PMID:26186194 | PMID:28514442 | PMID:28986522 | PMID:29643511 | PMID:31854042 | PMID:32296183 | PMID:32814053 | PMID:33403043 | PMID:33616774 | PMID:33961781 |
PMID:35563538 | PMID:35782979 | PMID:36614304 | PMID:37108544 |
DTX3 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dtx3 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dtx3 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dtx3 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DTX3 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DTX3 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dtx3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DTX3 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DTX3 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dtx3 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in DTX3
10 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 12q13.3-14.2(chr12:57013355-63042498)x1 | copy number loss | See cases [RCV000052813] | Chr12:57013355..63042498 [GRCh38] Chr12:57407139..63436278 [GRCh37] Chr12:55693406..61722545 [NCBI36] Chr12:12q13.3-14.2 |
pathogenic |
GRCh38/hg38 12q13.3-14.1(chr12:57041158-60273934)x1 | copy number loss | See cases [RCV000052814] | Chr12:57041158..60273934 [GRCh38] Chr12:57434942..60667715 [GRCh37] Chr12:55721209..58953982 [NCBI36] Chr12:12q13.3-14.1 |
pathogenic |
PIP4K2C:c.1090C>T | single nucleotide variant | Malignant melanoma [RCV000070145] | Chr12:57601253 [GRCh38] Chr12:57995036 [GRCh37] Chr12:56281303 [NCBI36] Chr12:12q13.3 |
not provided |
NM_001111270.2(ARHGEF25):c.371C>T (p.Ser124Phe) | single nucleotide variant | Malignant melanoma [RCV000062572] | Chr12:57613086 [GRCh38] Chr12:58006869 [GRCh37] Chr12:56293136 [NCBI36] Chr12:12q13.3 |
not provided |
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 | copy number gain | See cases [RCV000139555] | Chr12:121271..133196807 [GRCh38] Chr12:282465..133773393 [GRCh37] Chr12:100698..132283466 [NCBI36] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 | copy number gain | See cases [RCV000258805] | Chr12:1..133851895 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic|likely pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 | copy number gain | See cases [RCV000510482] | Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) | copy number gain | See cases [RCV000511643] | Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 | copy number gain | not provided [RCV000750253] | Chr12:621220..133779118 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 | copy number gain | not provided [RCV000750246] | Chr12:191619..133777645 [GRCh37] Chr12:12p13.33-q24.33 |
pathogenic |
GRCh37/hg19 12q13.3-14.1(chr12:57582163-59031979)x1 | copy number loss | not provided [RCV001006506] | Chr12:57582163..59031979 [GRCh37] Chr12:12q13.3-14.1 |
likely pathogenic |
GRCh37/hg19 12q13.2-14.1(chr12:55552371-62126304)x3 | copy number gain | not provided [RCV001006505] | Chr12:55552371..62126304 [GRCh37] Chr12:12q13.2-14.1 |
pathogenic |
NC_000012.11:g.(?_57881874)_(58190366_?)dup | duplication | not provided [RCV001916382] | Chr12:57881874..58190366 [GRCh37] Chr12:12q13.3-14.1 |
uncertain significance |
NC_000012.11:g.(?_57971476)_(58025915_?)dup | duplication | Spastic paraplegia [RCV003113623] | Chr12:57971476..58025915 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NC_000012.11:g.(?_57534470)_(58190366_?)dup | duplication | Familial melanoma [RCV003119257] | Chr12:57534470..58190366 [GRCh37] Chr12:12q13.3-14.1 |
uncertain significance |
GRCh37/hg19 12q13.3-14.1(chr12:57631073-58236597)x1 | copy number loss | not provided [RCV002474565] | Chr12:57631073..58236597 [GRCh37] Chr12:12q13.3-14.1 |
likely pathogenic |
NM_178502.4(DTX3):c.206C>G (p.Pro69Arg) | single nucleotide variant | not specified [RCV004189907] | Chr12:57607069 [GRCh38] Chr12:58000852 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.358G>A (p.Ala120Thr) | single nucleotide variant | not specified [RCV004108519] | Chr12:57607221 [GRCh38] Chr12:58001004 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.297G>C (p.Gln99His) | single nucleotide variant | not specified [RCV004135377] | Chr12:57607160 [GRCh38] Chr12:58000943 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.122G>A (p.Arg41Gln) | single nucleotide variant | not specified [RCV004215593] | Chr12:57606985 [GRCh38] Chr12:58000768 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.454C>T (p.Arg152Cys) | single nucleotide variant | not specified [RCV004181824] | Chr12:57607317 [GRCh38] Chr12:58001100 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.985C>T (p.Pro329Ser) | single nucleotide variant | not specified [RCV004185058] | Chr12:57609093 [GRCh38] Chr12:58002876 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.10G>C (p.Val4Leu) | single nucleotide variant | not specified [RCV004125761] | Chr12:57606873 [GRCh38] Chr12:58000656 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.304C>G (p.Leu102Val) | single nucleotide variant | not specified [RCV004269807] | Chr12:57607167 [GRCh38] Chr12:58000950 [GRCh37] Chr12:12q13.3 |
uncertain significance |
GRCh37/hg19 12q13.3-14.1(chr12:57064059-59314016)x1 | copy number loss | not provided [RCV003222783] | Chr12:57064059..59314016 [GRCh37] Chr12:12q13.3-14.1 |
likely pathogenic |
NM_178502.4(DTX3):c.418C>G (p.Pro140Ala) | single nucleotide variant | not specified [RCV004350846] | Chr12:57607281 [GRCh38] Chr12:58001064 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.440C>T (p.Pro147Leu) | single nucleotide variant | not specified [RCV004339254] | Chr12:57607303 [GRCh38] Chr12:58001086 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.424C>T (p.Pro142Ser) | single nucleotide variant | not specified [RCV004379516] | Chr12:57607287 [GRCh38] Chr12:58001070 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.592G>T (p.Ala198Ser) | single nucleotide variant | not specified [RCV004379517] | Chr12:57607455 [GRCh38] Chr12:58001238 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.727G>A (p.Val243Ile) | single nucleotide variant | not specified [RCV004379518] | Chr12:57607590 [GRCh38] Chr12:58001373 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.239A>G (p.Lys80Arg) | single nucleotide variant | not specified [RCV004379514] | Chr12:57607102 [GRCh38] Chr12:58000885 [GRCh37] Chr12:12q13.3 |
uncertain significance |
NM_178502.4(DTX3):c.406C>T (p.Arg136Trp) | single nucleotide variant | not specified [RCV004379515] | Chr12:57607269 [GRCh38] Chr12:58001052 [GRCh37] Chr12:12q13.3 |
uncertain significance |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
SHGC-148470 |
|
|||||||||||||||||||||||||||||||||||
DTX3__4788 |
|
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | 3 | |||||||||||||||||
Medium | 2147 | 2222 | 1298 | 189 | 1112 | 40 | 3185 | 1340 | 3663 | 325 | 1401 | 1540 | 157 | 1031 | 1856 | 1 | ||
Low | 227 | 737 | 424 | 430 | 747 | 420 | 1168 | 851 | 64 | 80 | 49 | 62 | 17 | 1 | 173 | 932 | 3 | |
Below cutoff | 20 | 29 | 2 | 3 | 59 | 4 | 2 | 3 | 3 | 9 | 6 | 7 | 1 | 2 | 1 |
RefSeq Acc Id: | ENST00000337737 ⟹ ENSP00000338050 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000548198 ⟹ ENSP00000447873 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000548478 ⟹ ENSP00000448224 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000548804 ⟹ ENSP00000449294 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000549583 ⟹ ENSP00000449688 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000550300 ⟹ ENSP00000446996 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000550596 ⟹ ENSP00000449118 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000551632 ⟹ ENSP00000448696 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000551835 ⟹ ENSP00000449950 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_001286245 ⟹ NP_001273174 | ||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001286246 ⟹ NP_001273175 | ||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_178502 ⟹ NP_848597 | ||||||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_005268697 ⟹ XP_005268754 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_005268698 ⟹ XP_005268755 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_005268700 ⟹ XP_005268757 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_005268703 ⟹ XP_005268760 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_011538022 ⟹ XP_011536324 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_024448876 ⟹ XP_024304644 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_047428479 ⟹ XP_047284435 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_047428480 ⟹ XP_047284436 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_047428481 ⟹ XP_047284437 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_047428482 ⟹ XP_047284438 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_047428483 ⟹ XP_047284439 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_047428484 ⟹ XP_047284440 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371378 ⟹ XP_054227353 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371379 ⟹ XP_054227354 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371380 ⟹ XP_054227355 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371381 ⟹ XP_054227356 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371382 ⟹ XP_054227357 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371383 ⟹ XP_054227358 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371384 ⟹ XP_054227359 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371385 ⟹ XP_054227360 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054371386 ⟹ XP_054227361 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NP_848597 ⟸ NM_178502 |
- Peptide Label: | isoform a |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_005268754 ⟸ XM_005268697 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_005268755 ⟸ XM_005268698 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_005268760 ⟸ XM_005268703 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_005268757 ⟸ XM_005268700 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | NP_001273175 ⟸ NM_001286246 |
- Peptide Label: | isoform a |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | NP_001273174 ⟸ NM_001286245 |
- Peptide Label: | isoform b |
- UniProtKB: | Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_011536324 ⟸ XM_011538022 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_024304644 ⟸ XM_024448876 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | ENSP00000338050 ⟸ ENST00000337737 |
RefSeq Acc Id: | ENSP00000449294 ⟸ ENST00000548804 |
RefSeq Acc Id: | ENSP00000448224 ⟸ ENST00000548478 |
RefSeq Acc Id: | ENSP00000447873 ⟸ ENST00000548198 |
RefSeq Acc Id: | ENSP00000449688 ⟸ ENST00000549583 |
RefSeq Acc Id: | ENSP00000446996 ⟸ ENST00000550300 |
RefSeq Acc Id: | ENSP00000449118 ⟸ ENST00000550596 |
RefSeq Acc Id: | ENSP00000448696 ⟸ ENST00000551632 |
RefSeq Acc Id: | ENSP00000449950 ⟸ ENST00000551835 |
RefSeq Acc Id: | XP_047284436 ⟸ XM_047428480 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_047284440 ⟸ XM_047428484 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047284435 ⟸ XM_047428479 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_047284439 ⟸ XM_047428483 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047284437 ⟸ XM_047428481 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_047284438 ⟸ XM_047428482 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227353 ⟸ XM_054371378 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227360 ⟸ XM_054371385 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054227359 ⟸ XM_054371384 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054227354 ⟸ XM_054371379 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227355 ⟸ XM_054371380 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227356 ⟸ XM_054371381 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227361 ⟸ XM_054371386 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q8NAU6 (UniProtKB/Swiss-Prot), Q8N9I9 (UniProtKB/Swiss-Prot), Q53ZZ2 (UniProtKB/Swiss-Prot), Q8NDS8 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054227358 ⟸ XM_054371383 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054227357 ⟸ XM_054371382 |
- Peptide Label: | isoform X1 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8N9I9-F1-model_v2 | AlphaFold | Q8N9I9 | 1-347 | view protein structure |
RGD ID: | 6789876 | ||||||||
Promoter ID: | HG_KWN:15988 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, K562, Lymphoblastoid | ||||||||
Transcripts: | NM_178502, UC001SOV.1, UC001SOX.1, UC001SOY.1 | ||||||||
Position: |
|
RGD ID: | 7224573 | ||||||||
Promoter ID: | EPDNEW_H18033 | ||||||||
Type: | initiation region | ||||||||
Name: | DTX3_2 | ||||||||
Description: | deltex E3 ubiquitin ligase 3 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H18034 | ||||||||
Experiment Methods: | Single-end sequencing.; Paired-end sequencing. | ||||||||
Position: |
|
RGD ID: | 7224577 | ||||||||
Promoter ID: | EPDNEW_H18034 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | DTX3_1 | ||||||||
Description: | deltex E3 ubiquitin ligase 3 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H18033 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:24457 | AgrOrtholog |
COSMIC | DTX3 | COSMIC |
Ensembl Genes | ENSG00000178498 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000337737 | ENTREZGENE |
ENST00000337737.8 | UniProtKB/Swiss-Prot | |
ENST00000548198 | ENTREZGENE | |
ENST00000548198.5 | UniProtKB/Swiss-Prot | |
ENST00000548478.1 | UniProtKB/TrEMBL | |
ENST00000548804 | ENTREZGENE | |
ENST00000548804.5 | UniProtKB/Swiss-Prot | |
ENST00000549583.5 | UniProtKB/TrEMBL | |
ENST00000550300.1 | UniProtKB/TrEMBL | |
ENST00000550596.5 | UniProtKB/TrEMBL | |
ENST00000551632 | ENTREZGENE | |
ENST00000551632.1 | UniProtKB/Swiss-Prot | |
ENST00000551835.5 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.390.130 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.30.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GTEx | ENSG00000178498 | GTEx |
HGNC ID | HGNC:24457 | ENTREZGENE |
Human Proteome Map | DTX3 | Human Proteome Map |
InterPro | Deltex_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Deltex_C_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Deltex_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING/FYVE/PHD | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:196403 | UniProtKB/Swiss-Prot |
NCBI Gene | 196403 | ENTREZGENE |
OMIM | 613142 | OMIM |
PANTHER | E3 UBIQUITIN-PROTEIN LIGASE DTX3-RELATED | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR12622 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | DTC | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
zf-C3HC4_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PharmGKB | PA134887936 | PharmGKB |
PROSITE | ZF_RING_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ZF_RING_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | RING | UniProtKB/Swiss-Prot |
Superfamily-SCOP | RING/U-box | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A0C4DGI8_HUMAN | UniProtKB/TrEMBL |
A0A1Y8EH36_HUMAN | UniProtKB/TrEMBL | |
A0A346B4X6_HUMAN | UniProtKB/TrEMBL | |
DTX3_HUMAN | UniProtKB/Swiss-Prot | |
F8VUZ4_HUMAN | UniProtKB/TrEMBL | |
F8VV96_HUMAN | UniProtKB/TrEMBL | |
H0YHF9_HUMAN | UniProtKB/TrEMBL | |
Q53ZZ2 | ENTREZGENE | |
Q8N9I9 | ENTREZGENE | |
Q8NAU6 | ENTREZGENE | |
Q8NDS8 | ENTREZGENE | |
UniProt Secondary | Q53ZZ2 | UniProtKB/Swiss-Prot |
Q8NAU6 | UniProtKB/Swiss-Prot | |
Q8NDS8 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2016-06-21 | DTX3 | deltex E3 ubiquitin ligase 3 | DTX3 | deltex 3, E3 ubiquitin ligase | Symbol and/or name change | 5135510 | APPROVED |
2014-02-04 | DTX3 | deltex 3, E3 ubiquitin ligase | DTX3 | deltex homolog 3 (Drosophila) | Symbol and/or name change | 5135510 | APPROVED |