KIAA0408 (KIAA0408) - Rat Genome Database

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Gene: KIAA0408 (KIAA0408) Homo sapiens
Analyze
Symbol: KIAA0408
Name: KIAA0408
RGD ID: 1345855
HGNC Page HGNC:21636
Description: ASSOCIATED WITH genetic disease; INTERACTS WITH 17beta-estradiol; 2,2',5,5'-tetrachlorobiphenyl; acrylamide
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ43995; hypothetical protein LOC9729; RP3-403A15.2; uncharacterized protein KIAA0408
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386127,438,406 - 127,459,389 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6127,438,406 - 127,459,389 (-)EnsemblGRCh38hg38GRCh38
GRCh376127,759,551 - 127,780,534 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366127,803,428 - 127,838,552 (-)NCBINCBI36Build 36hg18NCBI36
Build 346127,803,428 - 127,838,552NCBI
Celera6128,501,795 - 128,522,779 (-)NCBICelera
Cytogenetic Map6q22.33NCBI
HuRef6125,336,237 - 125,357,220 (-)NCBIHuRef
CHM1_16128,023,805 - 128,044,786 (-)NCBICHM1_1
T2T-CHM13v2.06128,627,332 - 128,648,316 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9455477   PMID:12477932   PMID:14574404   PMID:14702039   PMID:15489334   PMID:16189514   PMID:17043677   PMID:19460752   PMID:20195357   PMID:21900206   PMID:23414517   PMID:23455924  
PMID:24705354   PMID:25416956   PMID:31391242   PMID:31515488   PMID:32296183   PMID:32814053   PMID:33961781   PMID:36724073  


Genomics

Comparative Map Data
KIAA0408
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386127,438,406 - 127,459,389 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6127,438,406 - 127,459,389 (-)EnsemblGRCh38hg38GRCh38
GRCh376127,759,551 - 127,780,534 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366127,803,428 - 127,838,552 (-)NCBINCBI36Build 36hg18NCBI36
Build 346127,803,428 - 127,838,552NCBI
Celera6128,501,795 - 128,522,779 (-)NCBICelera
Cytogenetic Map6q22.33NCBI
HuRef6125,336,237 - 125,357,220 (-)NCBIHuRef
CHM1_16128,023,805 - 128,044,786 (-)NCBICHM1_1
T2T-CHM13v2.06128,627,332 - 128,648,316 (-)NCBIT2T-CHM13v2.0
9330159F19Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391029,074,937 - 29,106,775 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1029,087,602 - 29,106,775 (+)EnsemblGRCm39 Ensembl
GRCm381029,198,942 - 29,230,779 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1029,211,606 - 29,230,779 (+)EnsemblGRCm38mm10GRCm38
MGSCv371028,931,449 - 28,950,585 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361028,907,536 - 28,916,787 (+)NCBIMGSCv36mm8
Celera1030,143,320 - 30,162,948 (+)NCBICelera
Cytogenetic Map10A4NCBI
cM Map1016.55NCBI
Kiaa0408L
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8130,444,202 - 30,469,195 (-)NCBIGRCr8
mRatBN7.2128,615,600 - 28,630,309 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl128,615,606 - 28,630,309 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx128,410,782 - 28,425,489 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0134,410,635 - 34,425,342 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0128,611,398 - 28,626,105 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0131,040,142 - 31,055,453 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl131,040,142 - 31,055,453 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0132,469,423 - 32,484,734 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4129,411,079 - 29,494,908 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera127,281,962 - 27,296,664 (-)NCBICelera
Cytogenetic Map1p11NCBI
Kiaa0408
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554368,455,089 - 8,482,633 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554368,452,558 - 8,471,086 (-)NCBIChiLan1.0ChiLan1.0
KIAA0408
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25147,434,660 - 147,469,482 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16145,343,360 - 145,378,184 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06125,228,765 - 125,263,582 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16129,341,020 - 129,378,332 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6129,346,738 - 129,378,332 (-)Ensemblpanpan1.1panPan2
KIAA0408
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,136,318 - 66,151,960 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha166,935,931 - 66,955,113 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,333,781 - 66,356,335 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,334,562 - 66,352,994 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,263,191 - 66,282,381 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,047,744 - 66,078,137 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,690,246 - 66,720,708 (-)NCBIUU_Cfam_GSD_1.0
Kiaa0408
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946116,137,316 - 116,170,413 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366392,257,661 - 2,277,383 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366392,246,771 - 2,277,809 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0408
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl135,762,326 - 35,774,519 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1135,742,560 - 35,783,465 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KIAA0408
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11346,216,179 - 46,248,424 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1346,215,921 - 46,248,983 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604018,464,463 - 18,496,829 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa0408
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247531,832,756 - 1,863,701 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247531,833,161 - 1,863,571 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KIAA0408
35 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 6q21-23.2(chr6:108944899-132067720)x1 copy number loss See cases [RCV000051196] Chr6:108944899..132067720 [GRCh38]
Chr6:109266102..132388860 [GRCh37]
Chr6:109372795..132430553 [NCBI36]
Chr6:6q21-23.2		 pathogenic
GRCh38/hg38 6q22.1-22.33(chr6:115601230-128514324)x1 copy number loss See cases [RCV000052196] Chr6:115601230..128514324 [GRCh38]
Chr6:115922394..128835469 [GRCh37]
Chr6:116029087..128877162 [NCBI36]
Chr6:6q22.1-22.33		 pathogenic
GRCh38/hg38 6q22.32-22.33(chr6:126255554-129431726)x1 copy number loss See cases [RCV000052199] Chr6:126255554..129431726 [GRCh38]
Chr6:126576700..129752871 [GRCh37]
Chr6:126618393..129794564 [NCBI36]
Chr6:6q22.32-22.33		 pathogenic
NM_014702.4(KIAA0408):c.1340G>A (p.Arg447Lys) single nucleotide variant Malignant melanoma [RCV000067101] Chr6:127446979 [GRCh38]
Chr6:127768124 [GRCh37]
Chr6:127809817 [NCBI36]
Chr6:6q22.33		 not provided
GRCh38/hg38 6q22.31-22.33(chr6:125021773-127771834)x1 copy number loss See cases [RCV000137920] Chr6:125021773..127771834 [GRCh38]
Chr6:125342919..128092979 [GRCh37]
Chr6:125384618..128134672 [NCBI36]
Chr6:6q22.31-22.33		 uncertain significance
GRCh38/hg38 6q13-24.1(chr6:74382807-142040500)x3 copy number gain See cases [RCV000139729] Chr6:74382807..142040500 [GRCh38]
Chr6:75092523..142361637 [GRCh37]
Chr6:75149243..142403330 [NCBI36]
Chr6:6q13-24.1		 pathogenic
GRCh38/hg38 6q22.32-23.2(chr6:126494533-132497855)x1 copy number loss See cases [RCV000142805] Chr6:126494533..132497855 [GRCh38]
Chr6:126815679..132818994 [GRCh37]
Chr6:126857372..132860687 [NCBI36]
Chr6:6q22.32-23.2		 likely pathogenic
GRCh37/hg19 6q22.32-22.33(chr6:126419160-128801386)x1 copy number loss See cases [RCV000448929] Chr6:126419160..128801386 [GRCh37]
Chr6:6q22.32-22.33		 uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3 copy number gain See cases [RCV000512067] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6q22.33(chr6:127303904-128482021)x1 copy number loss See cases [RCV000510376] Chr6:127303904..128482021 [GRCh37]
Chr6:6q22.33		 likely benign
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482) copy number gain See cases [RCV000510595] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6q22.31-23.2(chr6:122612641-131564463)x1 copy number loss See cases [RCV000511386] Chr6:122612641..131564463 [GRCh37]
Chr6:6q22.31-23.2		 pathogenic
GRCh37/hg19 6q21-23.2(chr6:112939290-132327952)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626432] Chr6:112939290..132327952 [GRCh37]
Chr6:6q21-23.2		 drug response
NM_014702.5(KIAA0408):c.1688T>C (p.Val563Ala) single nucleotide variant Inborn genetic diseases [RCV003286758] Chr6:127446631 [GRCh38]
Chr6:127767776 [GRCh37]
Chr6:6q22.33		 uncertain significance
GRCh37/hg19 6q22.33(chr6:127451298-127807918)x1 copy number loss not provided [RCV000585244] Chr6:127451298..127807918 [GRCh37]
Chr6:6q22.33		 uncertain significance
GRCh37/hg19 6q22.32-22.33(chr6:126419160-128801386)x1 copy number loss not provided [RCV000682722] Chr6:126419160..128801386 [GRCh37]
Chr6:6q22.32-22.33		 uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3 copy number gain not provided [RCV000745403] Chr6:108666..170980171 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 copy number gain not provided [RCV000745400] Chr6:60107..171054786 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3 copy number gain not provided [RCV000745404] Chr6:165632..170919470 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
NM_014702.5(KIAA0408):c.979G>A (p.Glu327Lys) single nucleotide variant Inborn genetic diseases [RCV003239957] Chr6:127447340 [GRCh38]
Chr6:127768485 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.991T>C (p.Ser331Pro) single nucleotide variant Inborn genetic diseases [RCV003240964] Chr6:127447328 [GRCh38]
Chr6:127768473 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.959T>G (p.Met320Arg) single nucleotide variant Inborn genetic diseases [RCV003273776] Chr6:127447360 [GRCh38]
Chr6:127768505 [GRCh37]
Chr6:6q22.33		 uncertain significance
Single allele deletion Interstitial 6q microdeletion syndrome [RCV002280353] Chr6:115941808..133892653 [GRCh38]
Chr6:6q22.1-23.2		 pathogenic
GRCh37/hg19 6q22.31-22.33(chr6:122839432-128801386) copy number loss not specified [RCV002053616] Chr6:122839432..128801386 [GRCh37]
Chr6:6q22.31-22.33		 pathogenic
GRCh37/hg19 6q22.31-22.33(chr6:125037475-129494795)x1 copy number loss not provided [RCV001834303] Chr6:125037475..129494795 [GRCh37]
Chr6:6q22.31-22.33		 pathogenic
GRCh37/hg19 6q22.32-22.33(chr6:126419160-128801386) copy number loss not specified [RCV002053618] Chr6:126419160..128801386 [GRCh37]
Chr6:6q22.32-22.33		 uncertain significance
GRCh37/hg19 6q22.31-22.33(chr6:120059951-130033233)x1 copy number loss not provided [RCV002472894] Chr6:120059951..130033233 [GRCh37]
Chr6:6q22.31-22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1251G>C (p.Glu417Asp) single nucleotide variant Inborn genetic diseases [RCV002779878] Chr6:127447068 [GRCh38]
Chr6:127768213 [GRCh37]
Chr6:6q22.33		 likely benign
NM_014702.5(KIAA0408):c.1937A>G (p.His646Arg) single nucleotide variant Inborn genetic diseases [RCV002973809] Chr6:127444257 [GRCh38]
Chr6:127765402 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1244T>G (p.Val415Gly) single nucleotide variant Inborn genetic diseases [RCV002733069] Chr6:127447075 [GRCh38]
Chr6:127768220 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1955G>A (p.Arg652Gln) single nucleotide variant Inborn genetic diseases [RCV002734712] Chr6:127444239 [GRCh38]
Chr6:127765384 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1805G>A (p.Ser602Asn) single nucleotide variant Inborn genetic diseases [RCV002992670] Chr6:127446514 [GRCh38]
Chr6:127767659 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1895C>T (p.Pro632Leu) single nucleotide variant Inborn genetic diseases [RCV002707616] Chr6:127446424 [GRCh38]
Chr6:127767569 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.227A>T (p.Lys76Ile) single nucleotide variant Inborn genetic diseases [RCV002823628] Chr6:127450261 [GRCh38]
Chr6:127771406 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.689A>G (p.Glu230Gly) single nucleotide variant Inborn genetic diseases [RCV002910676] Chr6:127447630 [GRCh38]
Chr6:127768775 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.905A>G (p.Glu302Gly) single nucleotide variant Inborn genetic diseases [RCV002712931] Chr6:127447414 [GRCh38]
Chr6:127768559 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1930G>A (p.Ala644Thr) single nucleotide variant Inborn genetic diseases [RCV002645561] Chr6:127444264 [GRCh38]
Chr6:127765409 [GRCh37]
Chr6:6q22.33		 likely benign
NM_014702.5(KIAA0408):c.2036C>T (p.Thr679Ile) single nucleotide variant Inborn genetic diseases [RCV002764432] Chr6:127444158 [GRCh38]
Chr6:127765303 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1406C>T (p.Ser469Leu) single nucleotide variant Inborn genetic diseases [RCV002788274] Chr6:127446913 [GRCh38]
Chr6:127768058 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.656A>G (p.Asp219Gly) single nucleotide variant Inborn genetic diseases [RCV002963913] Chr6:127447663 [GRCh38]
Chr6:127768808 [GRCh37]
Chr6:6q22.33		 likely benign
NM_014702.5(KIAA0408):c.142C>T (p.Arg48Trp) single nucleotide variant Inborn genetic diseases [RCV003010847] Chr6:127450346 [GRCh38]
Chr6:127771491 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.194T>C (p.Ile65Thr) single nucleotide variant Inborn genetic diseases [RCV002807479] Chr6:127450294 [GRCh38]
Chr6:127771439 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.269G>A (p.Ser90Asn) single nucleotide variant Inborn genetic diseases [RCV002768813] Chr6:127450219 [GRCh38]
Chr6:127771364 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1499A>T (p.His500Leu) single nucleotide variant Inborn genetic diseases [RCV002652844] Chr6:127446820 [GRCh38]
Chr6:127767965 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.2044A>G (p.Asn682Asp) single nucleotide variant Inborn genetic diseases [RCV003220581] Chr6:127444150 [GRCh38]
Chr6:127765295 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1311G>T (p.Lys437Asn) single nucleotide variant Inborn genetic diseases [RCV003210849] Chr6:127447008 [GRCh38]
Chr6:127768153 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.650A>G (p.Asn217Ser) single nucleotide variant Inborn genetic diseases [RCV003198294] Chr6:127447669 [GRCh38]
Chr6:127768814 [GRCh37]
Chr6:6q22.33		 likely benign
GRCh38/hg38 6q21-23.1(chr6:113857248-130442177)x1 copy number loss Intellectual disability, autosomal dominant 55, with seizures [RCV003327704] Chr6:113857248..130442177 [GRCh38]
Chr6:6q21-23.1		 pathogenic
NM_014702.5(KIAA0408):c.1978C>T (p.Arg660Cys) single nucleotide variant Inborn genetic diseases [RCV003344902] Chr6:127444216 [GRCh38]
Chr6:127765361 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.1885G>C (p.Gly629Arg) single nucleotide variant Inborn genetic diseases [RCV003383544] Chr6:127446434 [GRCh38]
Chr6:127767579 [GRCh37]
Chr6:6q22.33		 uncertain significance
NM_014702.5(KIAA0408):c.182G>A (p.Ser61Asn) single nucleotide variant Inborn genetic diseases [RCV003354493] Chr6:127450306 [GRCh38]
Chr6:127771451 [GRCh37]
Chr6:6q22.33		 uncertain significance
GRCh37/hg19 6q22.31-23.3(chr6:120218852-137160850)x1 copy number loss not provided [RCV003482930] Chr6:120218852..137160850 [GRCh37]
Chr6:6q22.31-23.3		 pathogenic
NM_014702.5(KIAA0408):c.233T>C (p.Ile78Thr) single nucleotide variant not provided [RCV003432040] Chr6:127450255 [GRCh38]
Chr6:127771400 [GRCh37]
Chr6:6q22.33		 likely benign
NM_014702.5(KIAA0408):c.306A>G (p.Arg102=) single nucleotide variant not provided [RCV003432039] Chr6:127450182 [GRCh38]
Chr6:127771327 [GRCh37]
Chr6:6q22.33		 likely benign
GRCh37/hg19 6q22.31-22.33(chr6:124515654-130227224)x1 copy number loss not specified [RCV003986658] Chr6:124515654..130227224 [GRCh37]
Chr6:6q22.31-22.33		 uncertain significance
GRCh37/hg19 6q22.31-25.3(chr6:119840686-156623091)x3 copy number gain not specified [RCV003986631] Chr6:119840686..156623091 [GRCh37]
Chr6:6q22.31-25.3		 pathogenic
GRCh37/hg19 6q21-23.2(chr6:110546061-131896074)x3 copy number gain not specified [RCV003986625] Chr6:110546061..131896074 [GRCh37]
Chr6:6q21-23.2		 likely pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1647
Count of miRNA genes:842
Interacting mature miRNAs:962
Transcripts:ENST00000368281, ENST00000465254, ENST00000472335, ENST00000483725, ENST00000487331
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH46655  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,759,621 - 127,759,805UniSTSGRCh37
Build 366127,801,314 - 127,801,498RGDNCBI36
Celera6128,501,865 - 128,502,049RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,336,307 - 125,336,491UniSTS
GeneMap99-GB4 RH Map6513.93UniSTS
SHGC-30315  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,759,571 - 127,759,696UniSTSGRCh37
Build 366127,801,264 - 127,801,389RGDNCBI36
Celera6128,501,815 - 128,501,940RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,336,257 - 125,336,382UniSTS
GeneMap99-GB4 RH Map6514.14UniSTS
Whitehead-RH Map6736.7UniSTS
GeneMap99-G3 RH Map65486.0UniSTS
SHGC-34704  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,760,382 - 127,760,531UniSTSGRCh37
Build 366127,802,075 - 127,802,224RGDNCBI36
Celera6128,502,626 - 128,502,775RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,337,068 - 125,337,217UniSTS
Stanford-G3 RH Map65208.0UniSTS
NCBI RH Map61570.5UniSTS
GeneMap99-G3 RH Map65511.0UniSTS
STS-F04688  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,759,634 - 127,759,699UniSTSGRCh37
Build 366127,801,327 - 127,801,392RGDNCBI36
Celera6128,501,878 - 128,501,943RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,336,320 - 125,336,385UniSTS
GeneMap99-GB4 RH Map6514.42UniSTS
RH65429  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,764,939 - 127,765,060UniSTSGRCh37
Build 366127,806,632 - 127,806,753RGDNCBI36
Celera6128,507,183 - 128,507,304RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,341,626 - 125,341,747UniSTS
GeneMap99-GB4 RH Map6514.42UniSTS
RH47312  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376127,760,457 - 127,760,613UniSTSGRCh37
Build 366127,802,150 - 127,802,306RGDNCBI36
Celera6128,502,701 - 128,502,857RGD
Cytogenetic Map6q22.33UniSTS
HuRef6125,337,143 - 125,337,299UniSTS
GeneMap99-GB4 RH Map6514.14UniSTS
sY3084  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map4q27UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map14q22UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map1p35.3-p33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map15q15-q21.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapXq21.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map4p16UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q32.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map3q12.3UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 1129 23 283 2 34 1037 1030 2976 8 146 338 2 204 859
Low 1090 1975 905 168 468 9 2917 872 635 95 978 953 162 1 994 1889
Below cutoff 40 951 293 240 821 242 281 273 84 124 83 144 3 6 40 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000368281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6127,440,343 - 127,451,216 (-)Ensembl
RefSeq Acc Id: ENST00000465254   ⟹   ENSP00000436178
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6127,441,048 - 127,447,085 (-)Ensembl
RefSeq Acc Id: ENST00000472335
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6127,450,046 - 127,454,242 (-)Ensembl
RefSeq Acc Id: ENST00000483725   ⟹   ENSP00000435150
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6127,438,406 - 127,459,389 (-)Ensembl
RefSeq Acc Id: ENST00000487331   ⟹   ENSP00000434384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6127,447,598 - 127,459,365 (-)Ensembl
RefSeq Acc Id: NM_014702   ⟹   NP_055517
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh386127,438,406 - 127,459,389 (-)NCBI
GRCh376127,759,551 - 127,780,535 (-)RGD
Build 366127,803,428 - 127,838,552 (-)NCBI Archive
Celera6128,501,795 - 128,522,779 (-)RGD
HuRef6125,336,237 - 125,357,220 (-)ENTREZGENE
CHM1_16128,023,805 - 128,044,786 (-)NCBI
T2T-CHM13v2.06128,627,332 - 128,648,316 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_055517   ⟸   NM_014702
- UniProtKB: Q5TF20 (UniProtKB/Swiss-Prot),   O43158 (UniProtKB/Swiss-Prot),   E1P573 (UniProtKB/Swiss-Prot),   B3KRE5 (UniProtKB/Swiss-Prot),   Q7L2M2 (UniProtKB/Swiss-Prot),   Q6ZU52 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000436178   ⟸   ENST00000465254
RefSeq Acc Id: ENSP00000435150   ⟸   ENST00000483725
RefSeq Acc Id: ENSP00000434384   ⟸   ENST00000487331
Protein Domains
DUF4482

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6ZU52-F1-model_v2 AlphaFold Q6ZU52 1-694 view protein structure

Promoters
RGD ID:7209099
Promoter ID:EPDNEW_H10295
Type:multiple initiation site
Name:KIAA0408_2
Description:KIAA0408
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H10296  EPDNEW_H10297  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh386127,444,031 - 127,444,091EPDNEW
RGD ID:7209101
Promoter ID:EPDNEW_H10296
Type:initiation region
Name:KIAA0408_3
Description:KIAA0408
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H10295  EPDNEW_H10297  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh386127,446,451 - 127,446,511EPDNEW
RGD ID:7209105
Promoter ID:EPDNEW_H10297
Type:initiation region
Name:KIAA0408_1
Description:KIAA0408
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H10295  EPDNEW_H10296  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh386127,459,374 - 127,459,434EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:21636 AgrOrtholog
COSMIC KIAA0408 COSMIC
Ensembl Genes ENSG00000189367 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000465254.2 UniProtKB/TrEMBL
  ENST00000483725 ENTREZGENE
  ENST00000483725.8 UniProtKB/Swiss-Prot
  ENST00000487331.2 UniProtKB/TrEMBL
GTEx ENSG00000189367 GTEx
HGNC ID HGNC:21636 ENTREZGENE
Human Proteome Map KIAA0408 Human Proteome Map
InterPro DUF4482 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9729 UniProtKB/Swiss-Prot
NCBI Gene 9729 ENTREZGENE
OMIM 619236 OMIM
PANTHER MCG7194, ISOFORM CRA_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIKEN CDNA 9330159F19 GENE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF4482 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134883396 PharmGKB
UniProt B3KRE5 ENTREZGENE
  E1P573 ENTREZGENE
  E9PQS0_HUMAN UniProtKB/TrEMBL
  H0YEM8_HUMAN UniProtKB/TrEMBL
  K0408_HUMAN UniProtKB/Swiss-Prot
  O43158 ENTREZGENE
  Q5TF20 ENTREZGENE
  Q6ZU52 ENTREZGENE
  Q7L2M2 ENTREZGENE
UniProt Secondary B3KRE5 UniProtKB/Swiss-Prot
  E1P573 UniProtKB/Swiss-Prot
  O43158 UniProtKB/Swiss-Prot
  Q5TF20 UniProtKB/Swiss-Prot
  Q7L2M2 UniProtKB/Swiss-Prot