GDF15 (growth differentiation factor 15) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: GDF15 (growth differentiation factor 15) Homo sapiens
Analyze
Symbol: GDF15
Name: growth differentiation factor 15
RGD ID: 1344001
HGNC Page HGNC:30142
Description: Enables cytokine activity; hormone activity; and protein homodimerization activity. Involved in several processes, including enzyme-linked receptor protein signaling pathway; positive regulation of intracellular signal transduction; and reduction of food intake in response to dietary excess. Located in Golgi apparatus; extracellular region; and nucleus. Is active in extracellular space. Biomarker of anemia.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: GDF-15; growth/differentiation factor 15; HG; macrophage inhibitory cytokine 1; MIC-1; MIC1; NAG-1; non-steroidal anti-inflammatory drug-activated gene-1; NRG-1; NSAID (nonsteroidal anti-inflammatory drug)-activated protein 1; NSAID-activated gene 1 protein; NSAID-regulated gene 1 protein; PDF; PLAB; placental bone morphogenetic protein; placental TGF-beta; prostate differentiation factor; PTGF-beta; PTGFB
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,386,158 - 18,389,176 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,374,731 - 18,389,176 (+)EnsemblGRCh38hg38GRCh38
GRCh371918,496,968 - 18,499,986 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,357,968 - 18,360,986 (+)NCBINCBI36Build 36hg18NCBI36
Build 341918,357,984 - 18,360,986NCBI
Celera1918,398,797 - 18,401,815 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1918,062,378 - 18,063,268 (+)NCBIHuRef
CHM1_11918,497,209 - 18,500,231 (+)NCBICHM1_1
T2T-CHM13v2.01918,515,920 - 18,523,324 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-taxifolin  (EXP)
(-)-demecolcine  (EXP)
(1->4)-beta-D-glucan  (ISO)
(S)-colchicine  (EXP)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dichloroindophenol  (EXP)
2-acetamidofluorene  (ISO)
2-butoxyethanol  (ISO)
2-nitrofluorene  (ISO)
2-palmitoylglycerol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP,ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3,3'-diindolylmethane  (EXP)
3,4-dichloroaniline  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid  (EXP)
4-amino-2,6-dinitrotoluene  (ISO)
4-Hydroxybenzophenone  (ISO)
4-hydroxyphenyl retinamide  (EXP,ISO)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (EXP)
5-aza-2'-deoxycytidine  (EXP,ISO)
5-bromo-2'-deoxyuridine  (ISO)
5-fluorouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
8-Br-cAMP  (EXP)
9-cis-retinoic acid  (EXP)
[6]-Shogaol  (EXP)
aceclofenac  (EXP,ISO)
acetamide  (ISO)
acetylsalicylic acid  (EXP)
acrylamide  (EXP,ISO)
actinomycin D  (EXP)
adefovir pivoxil  (EXP)
adenine  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-4-oxoretinoic acid  (EXP)
all-trans-retinoic acid  (EXP)
amiodarone  (EXP)
ammonium chloride  (ISO)
amphibole asbestos  (EXP)
amphotericin B  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
antimycin A  (EXP)
arecoline  (EXP)
aristolochic acid A  (EXP,ISO)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
atrazine  (EXP)
Aurin  (EXP)
azathioprine  (EXP)
azoxystrobin  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
benzo[b]fluoranthene  (ISO)
Benzo[ghi]perylene  (ISO)
Benzo[k]fluoranthene  (ISO)
beta-naphthoflavone  (EXP)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bortezomib  (EXP,ISO)
bromoacetate  (EXP)
bromobenzene  (ISO)
buta-1,3-diene  (ISO)
butan-1-ol  (EXP)
butanal  (EXP)
C60 fullerene  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
calcitriol  (EXP)
cannabidiol  (EXP,ISO)
capsaicin  (EXP)
carbamazepine  (EXP)
carbon nanotube  (EXP,ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (EXP)
cefaloridine  (ISO)
celastrol  (EXP)
celecoxib  (EXP)
chlordecone  (ISO)
chloroacetaldehyde  (EXP)
chloropicrin  (EXP)
chloroprene  (ISO)
chlorpromazine  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cidofovir anhydrous  (EXP)
ciguatoxin CTX1B  (ISO)
cisplatin  (EXP,ISO)
clodronic acid  (EXP)
clofibrate  (ISO)
clothianidin  (EXP)
clozapine  (EXP)
cobalt atom  (EXP)
cobalt dichloride  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (EXP)
cordycepin  (EXP)
corosolic acid  (EXP)
coumestrol  (EXP)
crocidolite asbestos  (EXP)
cryptolepine  (EXP)
CU-O LINKAGE  (EXP)
cycloheximide  (EXP)
cyclosporin A  (EXP)
cylindrospermopsin  (EXP)
daunorubicin  (EXP)
decabromodiphenyl ether  (EXP)
deguelin  (EXP)
dexamethasone  (EXP,ISO)
diallyl disulfide  (EXP)
diarsenic trioxide  (EXP)
dibenz[a,h]anthracene  (ISO)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (ISO)
dichromium trioxide  (EXP)
diclofenac  (EXP,ISO)
dicrotophos  (EXP)
Didecyldimethylammonium  (EXP)
diethyl maleate  (EXP)
diethylstilbestrol  (ISO)
dihydroxyacetone  (EXP)
dimethylarsinic acid  (ISO)
dimethylarsinous acid  (EXP)
dioxygen  (EXP,ISO)
diquat  (ISO)
disodium selenite  (EXP)
diuron  (ISO)
divanadium pentaoxide  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
endosulfan  (EXP,ISO)
Enterolactone  (EXP)
entinostat  (EXP)
epoxiconazole  (ISO)
erlotinib hydrochloride  (EXP)
ethanol  (EXP)
ethyl methanesulfonate  (EXP)
etoposide  (EXP)
fenamidone  (ISO)
fenofibrate  (EXP,ISO)
fenpyroximate  (EXP)
flurbiprofen  (EXP)
flutamide  (ISO)
folic acid  (EXP,ISO)
formaldehyde  (EXP)
furan  (ISO)
gedunin  (EXP)
gemcitabine  (EXP)
genistein  (EXP,ISO)
gentamycin  (ISO)
gingerol  (EXP)
glyphosate  (ISO)
graphene oxide  (ISO)
graphite  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (EXP)
hydroxyurea  (EXP)
ibuprofen  (EXP)
ifosfamide  (EXP)
imidacloprid  (ISO)
imidazopyrazole  (EXP)
indole-3-methanol  (EXP)
indometacin  (EXP,ISO)
inulin  (ISO)
irinotecan  (EXP)
iron dichloride  (EXP)
isotretinoin  (EXP)
ivermectin  (EXP,ISO)
jaspamide  (EXP)
Lasiocarpine  (EXP)
latrunculin B  (EXP)
lead diacetate  (EXP)
leflunomide  (EXP)
lidocaine  (ISO)
lipopolysaccharide  (EXP,ISO)
lucanthone  (EXP)
manganese atom  (EXP)
manganese(0)  (EXP)
manganese(II) chloride  (EXP)
menadione  (EXP)
mercury dibromide  (EXP)
mercury dichloride  (ISO)
metacetamol  (ISO)
metformin  (ISO)
methamphetamine  (EXP,ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (EXP)
methylarsonic acid  (ISO)
methylmercury chloride  (EXP)
methylparaben  (EXP)
mitomycin C  (EXP)
Mitotane  (EXP)
mitoxantrone  (EXP)
mono(2-ethylhexyl) phthalate  (EXP)
N(4)-hydroxycytidine  (ISO)
N-acetyl-L-cysteine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-ethyl-N-nitrosourea  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (EXP)
N-methylformamide  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
N-Nitrosopyrrolidine  (EXP)
naphthalene  (ISO)
nickel dichloride  (EXP)
nickel sulfate  (EXP)
niclosamide  (EXP)
NS-398  (EXP)
Nutlin-3  (EXP)
O-methyleugenol  (EXP)
Octicizer  (ISO)
octreotide  (EXP)
oxaliplatin  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
pentanal  (EXP)
perfluorodecanoic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP)
perfluoroundecanoic acid  (EXP)
phenobarbital  (ISO)
phenylephrine  (EXP)
phenylmercury acetate  (EXP)
phloroglucinol  (EXP)
phorbol 13-acetate 12-myristate  (EXP)
phosgene  (ISO)
picoxystrobin  (EXP)
pifithrin-?  (EXP)
pinosylvin  (EXP)
pioglitazone  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (ISO)
piroxicam  (EXP)
platycodin D  (EXP)
potassium dichromate  (EXP)
progesterone  (EXP,ISO)
propanal  (EXP)
prostaglandin J2  (EXP)
pterostilbene  (EXP)
pyrimidifen  (EXP)
quercetin  (EXP)
resveratrol  (EXP)
Ro 31-8220  (EXP)
rotenone  (EXP,ISO)
rottlerin  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
SB 203580  (EXP)
SB 431542  (EXP)
SCH 23390  (ISO)
Securinine  (EXP)
serpentine asbestos  (EXP)
silibinin  (EXP)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sulindac  (EXP,ISO)
sulindac sulfide  (EXP,ISO)
sunitinib  (EXP)
T-2 toxin  (EXP)
tamoxifen  (EXP,ISO)
tebufenpyrad  (EXP)
temozolomide  (EXP)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thapsigargin  (EXP)
theophylline  (EXP)
thiabendazole  (ISO)
thifluzamide  (EXP)
thioacetamide  (ISO)
thiostrepton  (EXP)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trans-pinosylvin  (EXP)
tributyl phosphate  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
triphenyl phosphate  (ISO)
triptonide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tris(2-chloroethyl) phosphate  (ISO)
troglitazone  (EXP)
Tungsten carbide  (EXP)
tunicamycin  (EXP)
urethane  (EXP)
valproic acid  (EXP,ISO)
vincristine  (EXP)
wortmannin  (EXP)
zinc atom  (EXP,ISO)
zinc oxide  (ISO)
zinc pyrithione  (EXP)
zinc(0)  (EXP,ISO)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Hepcidin and GDF15 in anemia of multiple myeloma. Mei S, etal., Int J Hematol. 2014 Sep;100(3):266-73. doi: 10.1007/s12185-014-1626-7. Epub 2014 Jul 23.
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8125298   PMID:9326641   PMID:9348093   PMID:9375789   PMID:9426002   PMID:9593718   PMID:10524241   PMID:10777512   PMID:10811612   PMID:11102463   PMID:11134143   PMID:11141057  
PMID:11259636   PMID:11278594   PMID:11445565   PMID:11895857   PMID:11994274   PMID:12011055   PMID:12082608   PMID:12090982   PMID:12139236   PMID:12477932   PMID:12514175   PMID:12624183  
PMID:12855642   PMID:12894347   PMID:12900512   PMID:12941831   PMID:14575402   PMID:14662774   PMID:14726168   PMID:15073115   PMID:15316060   PMID:15342369   PMID:15670751   PMID:15677629  
PMID:15757899   PMID:15900300   PMID:16154591   PMID:16286461   PMID:16388506   PMID:16397141   PMID:16484622   PMID:16699947   PMID:16741990   PMID:16775185   PMID:17050687   PMID:17192395  
PMID:17328047   PMID:17548705   PMID:17637746   PMID:17721544   PMID:17908975   PMID:17909264   PMID:17982462   PMID:18029348   PMID:18264720   PMID:18359786   PMID:18398830   PMID:18550273  
PMID:18624398   PMID:18657084   PMID:18676680   PMID:18754039   PMID:18801729   PMID:18824595   PMID:19047680   PMID:19060904   PMID:19074584   PMID:19100681   PMID:19125423   PMID:19133249  
PMID:19152406   PMID:19168526   PMID:19170196   PMID:19302795   PMID:19341722   PMID:19357976   PMID:19375854   PMID:19401523   PMID:19470878   PMID:19505289   PMID:19505919   PMID:19515791  
PMID:19521960   PMID:19625176   PMID:19692168   PMID:19695766   PMID:19913121   PMID:19946339   PMID:20024638   PMID:20031597   PMID:20067113   PMID:20104227   PMID:20130018   PMID:20160200  
PMID:20167682   PMID:20193126   PMID:20215826   PMID:20237496   PMID:20357380   PMID:20385121   PMID:20431030   PMID:20534737   PMID:20576287   PMID:20628086   PMID:20800603   PMID:20854422  
PMID:20855664   PMID:20860541   PMID:20884666   PMID:20937742   PMID:20966402   PMID:20975101   PMID:21097678   PMID:21245963   PMID:21312063   PMID:21336029   PMID:21437897   PMID:21475976  
PMID:21487066   PMID:21503121   PMID:21504622   PMID:21535154   PMID:21548946   PMID:21586550   PMID:21616994   PMID:21645023   PMID:21773947   PMID:21803025   PMID:21809352   PMID:21865063  
PMID:21873635   PMID:21881845   PMID:22023041   PMID:22064648   PMID:22144502   PMID:22160844   PMID:22180562   PMID:22231869   PMID:22301101   PMID:22341306   PMID:22365732   PMID:22384099  
PMID:22484283   PMID:22505696   PMID:22511768   PMID:22723347   PMID:22815297   PMID:22872134   PMID:22975449   PMID:23071585   PMID:23146921   PMID:23154866   PMID:23262134   PMID:23280549  
PMID:23328263   PMID:23335088   PMID:23376485   PMID:23468844   PMID:23503457   PMID:23525862   PMID:23533145   PMID:23758647   PMID:23799024   PMID:23824055   PMID:23836903   PMID:23850849  
PMID:23996089   PMID:24069146   PMID:24136234   PMID:24216602   PMID:24236027   PMID:24312445   PMID:24345755   PMID:24383865   PMID:24384540   PMID:24401984   PMID:24430093   PMID:24447735  
PMID:24462860   PMID:24504814   PMID:24521768   PMID:24554716   PMID:24565956   PMID:24597762   PMID:24669014   PMID:24681016   PMID:24759784   PMID:24780757   PMID:24839357   PMID:24867648  
PMID:25016703   PMID:25065856   PMID:25093616   PMID:25117302   PMID:25124572   PMID:25171167   PMID:25179833   PMID:25180886   PMID:25294786   PMID:25327758   PMID:25347430   PMID:25380934  
PMID:25464930   PMID:25464937   PMID:25490861   PMID:25516419   PMID:25590623   PMID:25730371   PMID:25767870   PMID:25820390   PMID:25823874   PMID:25853582   PMID:25867265   PMID:25867369  
PMID:25867953   PMID:25880686   PMID:25893289   PMID:26004619   PMID:26018318   PMID:26026393   PMID:26075263   PMID:26090487   PMID:26114631   PMID:26142330   PMID:26154268   PMID:26177355  
PMID:26207898   PMID:26243260   PMID:26249737   PMID:26254771   PMID:26273671   PMID:26276681   PMID:26294726   PMID:26339382   PMID:26365480   PMID:26463265   PMID:26482961   PMID:26496610  
PMID:26497212   PMID:26511487   PMID:26520384   PMID:26544895   PMID:26681806   PMID:26741507   PMID:26745373   PMID:26781874   PMID:26795264   PMID:26867126   PMID:26892343   PMID:26909594  
PMID:26938614   PMID:26972631   PMID:26990020   PMID:26996787   PMID:27056183   PMID:27069189   PMID:27093475   PMID:27118648   PMID:27154403   PMID:27164684   PMID:27173615   PMID:27278086  
PMID:27421482   PMID:27454651   PMID:27642607   PMID:27643489   PMID:27708225   PMID:27750354   PMID:27771295   PMID:27779672   PMID:27811204   PMID:27889897   PMID:27903972   PMID:27918822  
PMID:27926473   PMID:27986797   PMID:28062617   PMID:28145442   PMID:28185024   PMID:28199981   PMID:28206960   PMID:28245821   PMID:28298399   PMID:28314325   PMID:28327460   PMID:28385068  
PMID:28388574   PMID:28389123   PMID:28411246   PMID:28455268   PMID:28489602   PMID:28526273   PMID:28572090   PMID:28597461   PMID:28664745   PMID:28734801   PMID:28762762   PMID:28787735  
PMID:28806401   PMID:28831101   PMID:28835660   PMID:28846097   PMID:28846098   PMID:28846099   PMID:28855167   PMID:28869715   PMID:28872977   PMID:28880265   PMID:28891811   PMID:28898507  
PMID:28953886   PMID:29025958   PMID:29046435   PMID:29099703   PMID:29157123   PMID:29161287   PMID:29171983   PMID:29192094   PMID:29222133   PMID:29386197   PMID:29397580   PMID:29398617  
PMID:29400662   PMID:29489980   PMID:29499325   PMID:29563502   PMID:29566722   PMID:29580231   PMID:29636108   PMID:29671197   PMID:29714603   PMID:29717162   PMID:29724997   PMID:29771147  
PMID:29771963   PMID:29773900   PMID:29791474   PMID:29948426   PMID:29949149   PMID:30178545   PMID:30224067   PMID:30295110   PMID:30332510   PMID:30350239   PMID:30533221   PMID:30547825  
PMID:30554141   PMID:30581152   PMID:30621163   PMID:30645608   PMID:30646851   PMID:30652072   PMID:30700740   PMID:30718144   PMID:30755731   PMID:30761871   PMID:30772304   PMID:30776685  
PMID:30808336   PMID:30816507   PMID:30819257   PMID:30909145   PMID:31004333   PMID:31029521   PMID:31071550   PMID:31075112   PMID:31130280   PMID:31153870   PMID:31155355   PMID:31163432  
PMID:31174919   PMID:31280356   PMID:31310811   PMID:31389184   PMID:31395909   PMID:31432710   PMID:31476622   PMID:31534059   PMID:31535977   PMID:31539407   PMID:31540324   PMID:31545486  
PMID:31589613   PMID:31645058   PMID:31669236   PMID:31677796   PMID:31765611   PMID:31766097   PMID:31772623   PMID:31801546   PMID:31827641   PMID:31852642   PMID:31862518   PMID:31875646  
PMID:31896114   PMID:31901761   PMID:31926293   PMID:31928885   PMID:31980649   PMID:31984437   PMID:32000030   PMID:32034106   PMID:32076610   PMID:32089755   PMID:32106110   PMID:32278609  
PMID:32296183   PMID:32304740   PMID:32305327   PMID:32327914   PMID:32353859   PMID:32384007   PMID:32388677   PMID:32416083   PMID:32422242   PMID:32424982   PMID:32427048   PMID:32436412  
PMID:32475214   PMID:32477368   PMID:32492819   PMID:32589369   PMID:32614434   PMID:32645137   PMID:32661391   PMID:32665550   PMID:32686380   PMID:32689596   PMID:32691494   PMID:32694673  
PMID:32746821   PMID:32764826   PMID:32814769   PMID:32857451   PMID:32886834   PMID:32901511   PMID:32904560   PMID:32907909   PMID:32921207   PMID:32966555   PMID:32983624   PMID:33003626  
PMID:33022573   PMID:33025864   PMID:33032108   PMID:33060197   PMID:33062674   PMID:33069782   PMID:33098235   PMID:33131010   PMID:33131471   PMID:33164866   PMID:33178828   PMID:33198869  
PMID:33201838   PMID:33239667   PMID:33242463   PMID:33244199   PMID:33256569   PMID:33257192   PMID:33302552   PMID:33346004   PMID:33358864   PMID:33369156   PMID:33378034   PMID:33381924  
PMID:33411243   PMID:33428715   PMID:33486678   PMID:33487149   PMID:33491432   PMID:33543888   PMID:33567936   PMID:33589633   PMID:33604810   PMID:33605059   PMID:33678319   PMID:33682011  
PMID:33691944   PMID:33706979   PMID:33721455   PMID:33737080   PMID:33748838   PMID:33759309   PMID:33771482   PMID:33784024   PMID:33790859   PMID:33827736   PMID:33847920   PMID:33874963  
PMID:33938154   PMID:33961185   PMID:33961781   PMID:33988174   PMID:34110100   PMID:34112076   PMID:34116485   PMID:34169422   PMID:34171946   PMID:34187898   PMID:34203775   PMID:34217226  
PMID:34221186   PMID:34247467   PMID:34255062   PMID:34294853   PMID:34335566   PMID:34376526   PMID:34387117   PMID:34397341   PMID:34412918   PMID:34415992   PMID:34419687   PMID:34489334  
PMID:34508892   PMID:34526107   PMID:34566964   PMID:34572118   PMID:34591612   PMID:34617415   PMID:34681812   PMID:34768304   PMID:34818652   PMID:34836750   PMID:34849709   PMID:34889247  
PMID:34948405   PMID:34948431   PMID:34952762   PMID:34972147   PMID:34989084   PMID:35023440   PMID:35039167   PMID:35051643   PMID:35066766   PMID:35068064   PMID:35132822   PMID:35133939  
PMID:35177851   PMID:35194014   PMID:35218128   PMID:35251002   PMID:35275240   PMID:35334497   PMID:35351601   PMID:35362130   PMID:35363860   PMID:35384245   PMID:35385705   PMID:35420978  
PMID:35449185   PMID:35504134   PMID:35510313   PMID:35549472   PMID:35588865   PMID:35616608   PMID:35686301   PMID:35762561   PMID:35784345   PMID:35801986   PMID:35817957   PMID:35818647  
PMID:35853851   PMID:35993367   PMID:36064109   PMID:36104054   PMID:36142823   PMID:36151002   PMID:36244648   PMID:36273168   PMID:36325442   PMID:36327876   PMID:36334433   PMID:36336806  
PMID:36361969   PMID:36444166   PMID:36508390   PMID:36525138   PMID:36542831   PMID:36545337   PMID:36547021   PMID:36549580   PMID:36563967   PMID:36656215   PMID:36729006   PMID:36740767  
PMID:36769245   PMID:36806122   PMID:36864452   PMID:36880142   PMID:36948614   PMID:36952345   PMID:36989524   PMID:36992609   PMID:37088328   PMID:37093513   PMID:37115357   PMID:37146903  
PMID:37152099   PMID:37190783   PMID:37192696   PMID:37268330   PMID:37272232   PMID:37373159   PMID:37380764   PMID:37489743   PMID:37499753   PMID:37549445   PMID:37558836   PMID:37584611  
PMID:37715843   PMID:37773870   PMID:37804244   PMID:37858436   PMID:37937607   PMID:37955023   PMID:37974205   PMID:38092039   PMID:38180987   PMID:38195721   PMID:38247838   PMID:38254638  
PMID:38301257   PMID:38357857   PMID:38378599   PMID:38396781  


Genomics

Comparative Map Data
GDF15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,386,158 - 18,389,176 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,374,731 - 18,389,176 (+)EnsemblGRCh38hg38GRCh38
GRCh371918,496,968 - 18,499,986 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,357,968 - 18,360,986 (+)NCBINCBI36Build 36hg18NCBI36
Build 341918,357,984 - 18,360,986NCBI
Celera1918,398,797 - 18,401,815 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1918,062,378 - 18,063,268 (+)NCBIHuRef
CHM1_11918,497,209 - 18,500,231 (+)NCBICHM1_1
T2T-CHM13v2.01918,515,920 - 18,523,324 (+)NCBIT2T-CHM13v2.0
Gdf15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,082,043 - 71,085,106 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,082,043 - 71,085,106 (-)EnsemblGRCm39 Ensembl
GRCm38870,629,393 - 70,632,470 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,629,393 - 70,632,456 (-)EnsemblGRCm38mm10GRCm38
MGSCv37873,153,293 - 73,155,534 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36873,558,382 - 73,561,082 (-)NCBIMGSCv36mm8
Celera873,186,175 - 73,188,416 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.15NCBI
Gdf15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,838,436 - 18,842,022 (+)NCBIGRCr8
mRatBN7.21618,804,457 - 18,808,043 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,805,239 - 18,808,055 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,847,005 - 18,849,564 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,979,943 - 19,982,528 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,899,963 - 18,902,522 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,555,395 - 20,557,978 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,555,395 - 20,557,978 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,411,167 - 20,413,750 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,310,882 - 19,313,465 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,310,851 - 19,313,463 (+)NCBI
Celera1618,997,242 - 18,999,829 (+)NCBICelera
Cytogenetic Map16p14NCBI
Gdf15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555243,123,760 - 3,125,621 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555243,123,513 - 3,125,642 (-)NCBIChiLan1.0ChiLan1.0
GDF15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22023,235,317 - 23,249,754 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11922,255,036 - 22,258,089 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,864,840 - 17,867,883 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,835,216 - 18,838,470 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,835,216 - 18,838,470 (+)Ensemblpanpan1.1panPan2
GDF15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12044,633,131 - 44,636,842 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2044,634,588 - 44,636,821 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2044,547,490 - 44,551,239 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,119,086 - 45,122,834 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,120,542 - 45,122,775 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,356,357 - 44,360,107 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02044,766,491 - 44,770,241 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,041,907 - 45,045,657 (-)NCBIUU_Cfam_GSD_1.0
Gdf15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,305,463 - 203,310,650 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365962,854,841 - 2,857,111 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365962,854,620 - 2,857,018 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GDF15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,408,904 - 59,411,358 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,409,035 - 59,411,356 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GDF15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,853,397 - 16,861,924 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,852,971 - 16,861,964 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660742,479,299 - 2,485,699 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gdf15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,634,174 - 1,636,242 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,633,927 - 1,636,242 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GDF15
25 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19p13.11-q13.11(chr19:17176767-34924150)x3 copy number gain See cases [RCV000050635] Chr19:17176767..34924150 [GRCh38]
Chr19:17287576..35415054 [GRCh37]
Chr19:17148576..40106894 [NCBI36]
Chr19:19p13.11-q13.11
pathogenic
GRCh38/hg38 19p13.12-q11(chr19:13974677-27839676)x3 copy number gain See cases [RCV000052912] Chr19:13974677..27839676 [GRCh38]
Chr19:14085489..28330584 [GRCh37]
Chr19:13946489..33022424 [NCBI36]
Chr19:19p13.12-q11
pathogenic
GRCh38/hg38 19p13.11(chr19:17922234-18463153)x1 copy number loss See cases [RCV000053946] Chr19:17922234..18463153 [GRCh38]
Chr19:18033043..18573963 [GRCh37]
Chr19:17894043..18434963 [NCBI36]
Chr19:19p13.11
pathogenic
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31
pathogenic
GRCh38/hg38 19p13.12-12(chr19:15133594-24193591)x3 copy number gain See cases [RCV000136696] Chr19:15133594..24193591 [GRCh38]
Chr19:15244405..24376393 [GRCh37]
Chr19:15105405..24168233 [NCBI36]
Chr19:19p13.12-12
pathogenic|likely pathogenic
GRCh38/hg38 19p13.11(chr19:18133970-18424117)x1 copy number loss See cases [RCV000142944] Chr19:18133970..18424117 [GRCh38]
Chr19:18244780..18534927 [GRCh37]
Chr19:18105780..18395927 [NCBI36]
Chr19:19p13.11
uncertain significance
GRCh37/hg19 19p13.11-11(chr19:16526787-24631604)x3 copy number gain not provided [RCV000752593] Chr19:16526787..24631604 [GRCh37]
Chr19:19p13.11-11
pathogenic
GRCh37/hg19 19p13.11(chr19:18136482-19087534)x3 copy number gain See cases [RCV000449006] Chr19:18136482..19087534 [GRCh37]
Chr19:19p13.11
uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.11(chr19:18332984-18540644)x3 copy number gain not provided [RCV000740067] Chr19:18332984..18540644 [GRCh37]
Chr19:19p13.11
benign
NM_004864.4(GDF15):c.349G>A (p.Ala117Thr) single nucleotide variant not provided [RCV000961632] Chr19:18388357 [GRCh38]
Chr19:18499167 [GRCh37]
Chr19:19p13.11
benign
NM_004864.4(GDF15):c.350C>A (p.Ala117Asp) single nucleotide variant not provided [RCV000961633] Chr19:18388358 [GRCh38]
Chr19:18499168 [GRCh37]
Chr19:19p13.11
benign
NM_004864.4(GDF15):c.472C>A (p.Arg158=) single nucleotide variant not provided [RCV000921073] Chr19:18388480 [GRCh38]
Chr19:18499290 [GRCh37]
Chr19:19p13.11
benign
NM_004864.4(GDF15):c.6C>T (p.Pro2=) single nucleotide variant not provided [RCV000889002] Chr19:18386195 [GRCh38]
Chr19:18497005 [GRCh37]
Chr19:19p13.11
benign
GRCh37/hg19 19p13.12-12(chr19:14286624-20956753)x3 copy number gain not provided [RCV001259370] Chr19:14286624..20956753 [GRCh37]
Chr19:19p13.12-12
pathogenic
NM_004864.4(GDF15):c.181G>A (p.Glu61Lys) single nucleotide variant not specified [RCV004292718] Chr19:18386370 [GRCh38]
Chr19:18497180 [GRCh37]
Chr19:19p13.11
uncertain significance
GRCh37/hg19 19p13.11(chr19:18327675-18543341) copy number gain not specified [RCV002052677] Chr19:18327675..18543341 [GRCh37]
Chr19:19p13.11
uncertain significance
NC_000019.9:g.(?_17927663)_(19312528_?)dup duplication Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 1 [RCV003116292] Chr19:17927663..19312528 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.869C>G (p.Thr290Ser) single nucleotide variant not specified [RCV004088356] Chr19:18388877 [GRCh38]
Chr19:18499687 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.605A>G (p.His202Arg) single nucleotide variant not specified [RCV004090806] Chr19:18388613 [GRCh38]
Chr19:18499423 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.280C>T (p.Arg94Trp) single nucleotide variant not specified [RCV004223582] Chr19:18388288 [GRCh38]
Chr19:18499098 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.375C>G (p.Phe125Leu) single nucleotide variant not specified [RCV004207660] Chr19:18388383 [GRCh38]
Chr19:18499193 [GRCh37]
Chr19:19p13.11
likely benign
NM_004864.4(GDF15):c.823G>C (p.Val275Leu) single nucleotide variant not specified [RCV004084646] Chr19:18388831 [GRCh38]
Chr19:18499641 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.185A>C (p.Asp62Ala) single nucleotide variant not specified [RCV004127304] Chr19:18386374 [GRCh38]
Chr19:18497184 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.332C>T (p.Pro111Leu) single nucleotide variant not specified [RCV004103311] Chr19:18388340 [GRCh38]
Chr19:18499150 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.11A>G (p.Gln4Arg) single nucleotide variant not specified [RCV004187893] Chr19:18386200 [GRCh38]
Chr19:18497010 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.799G>A (p.Asp267Asn) single nucleotide variant not specified [RCV004081019] Chr19:18388807 [GRCh38]
Chr19:18499617 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.566C>T (p.Ala189Val) single nucleotide variant not specified [RCV004195285] Chr19:18388574 [GRCh38]
Chr19:18499384 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.260G>A (p.Arg87Gln) single nucleotide variant not specified [RCV004160303] Chr19:18386449 [GRCh38]
Chr19:18497259 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.62T>C (p.Leu21Pro) single nucleotide variant not specified [RCV004254200] Chr19:18386251 [GRCh38]
Chr19:18497061 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.49G>A (p.Val17Met) single nucleotide variant not specified [RCV004258554] Chr19:18386238 [GRCh38]
Chr19:18497048 [GRCh37]
Chr19:19p13.11
likely benign
NM_004864.4(GDF15):c.67T>C (p.Trp23Arg) single nucleotide variant not specified [RCV004303413] Chr19:18386256 [GRCh38]
Chr19:18497066 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.763G>A (p.Ala255Thr) single nucleotide variant not specified [RCV004358871] Chr19:18388771 [GRCh38]
Chr19:18499581 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.529C>T (p.Arg177Trp) single nucleotide variant not specified [RCV004365787] Chr19:18388537 [GRCh38]
Chr19:18499347 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.631T>G (p.Cys211Gly) single nucleotide variant Hyperemesis gravidarum, susceptibility to [RCV003881729] Chr19:18388639 [GRCh38]
Chr19:18499449 [GRCh37]
Chr19:19p13.11
risk factor
NM_004864.4(GDF15):c.11A>T (p.Gln4Leu) single nucleotide variant not specified [RCV004387579] Chr19:18386200 [GRCh38]
Chr19:18497010 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.560A>T (p.Gln187Leu) single nucleotide variant not specified [RCV004387587] Chr19:18388568 [GRCh38]
Chr19:18499378 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.719G>A (p.Cys240Tyr) single nucleotide variant not specified [RCV004387589] Chr19:18388727 [GRCh38]
Chr19:18499537 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.746G>C (p.Arg249Pro) single nucleotide variant not specified [RCV004387590] Chr19:18388754 [GRCh38]
Chr19:18499564 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.457C>T (p.Pro153Ser) single nucleotide variant not specified [RCV004387585] Chr19:18388465 [GRCh38]
Chr19:18499275 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.304C>A (p.His102Asn) single nucleotide variant not specified [RCV004387581] Chr19:18388312 [GRCh38]
Chr19:18499122 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.530G>C (p.Arg177Pro) single nucleotide variant not specified [RCV004387586] Chr19:18388538 [GRCh38]
Chr19:18499348 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.707A>G (p.Gln236Arg) single nucleotide variant not specified [RCV004387588] Chr19:18388715 [GRCh38]
Chr19:18499525 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.247G>A (p.Ala83Thr) single nucleotide variant not specified [RCV004387580] Chr19:18386436 [GRCh38]
Chr19:18497246 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.344C>A (p.Pro115His) single nucleotide variant not specified [RCV004387582] Chr19:18388352 [GRCh38]
Chr19:18499162 [GRCh37]
Chr19:19p13.11
uncertain significance
NM_004864.4(GDF15):c.367G>C (p.Ala123Pro) single nucleotide variant not specified [RCV004387583] Chr19:18388375 [GRCh38]
Chr19:18499185 [GRCh37]
Chr19:19p13.11
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1503
Count of miRNA genes:779
Interacting mature miRNAs:926
Transcripts:ENST00000252809, ENST00000594925, ENST00000595973, ENST00000597765, ENST00000604609
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
PMC26624P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371918,496,138 - 18,496,995UniSTSGRCh37
Build 361918,357,138 - 18,357,995RGDNCBI36
Celera1918,397,967 - 18,398,824RGD
Cytogenetic Map19p13.11UniSTS
RH68131  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371918,499,819 - 18,499,939UniSTSGRCh37
Build 361918,360,819 - 18,360,939RGDNCBI36
Celera1918,401,648 - 18,401,768RGD
Cytogenetic Map19p13.11UniSTS
HuRef1918,063,101 - 18,063,221UniSTS
GeneMap99-GB4 RH Map19102.21UniSTS
NCBI RH Map19172.4UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 7 2 2 2 26 2 6 11 5 1 1
Medium 839 625 722 356 241 299 1125 151 331 374 574 976 69 1 551 570 5
Low 1568 1777 989 258 1354 159 2779 1530 1951 37 842 619 102 646 1929 2
Below cutoff 25 581 11 8 303 5 422 506 1439 1 31 12 3 6 285

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_004864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB000584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC008397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF003934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF008303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF019770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF173860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK225431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ901034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT019465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA441527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U51731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U88323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000252809   ⟹   ENSP00000252809
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1918,386,158 - 18,389,176 (+)Ensembl
RefSeq Acc Id: ENST00000594925
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1918,386,920 - 18,388,484 (+)Ensembl
RefSeq Acc Id: ENST00000595973   ⟹   ENSP00000470531
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1918,382,170 - 18,388,935 (+)Ensembl
RefSeq Acc Id: ENST00000597765   ⟹   ENSP00000469819
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1918,374,731 - 18,388,935 (+)Ensembl
RefSeq Acc Id: ENST00000604609
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1918,374,752 - 18,386,072 (+)Ensembl
RefSeq Acc Id: NM_004864   ⟹   NP_004855
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381918,386,158 - 18,389,176 (+)NCBI
GRCh371918,496,968 - 18,499,986 (+)ENTREZGENE
Build 361918,357,968 - 18,360,986 (+)NCBI Archive
HuRef1918,062,378 - 18,063,268 (+)ENTREZGENE
CHM1_11918,497,209 - 18,500,231 (+)NCBI
T2T-CHM13v2.01918,520,303 - 18,523,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054322715   ⟹   XP_054178690
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01918,515,920 - 18,523,324 (+)NCBI
RefSeq Acc Id: NP_004855   ⟸   NM_004864
- Peptide Label: preproprotein
- UniProtKB: Q9BWA0 (UniProtKB/Swiss-Prot),   P78360 (UniProtKB/Swiss-Prot),   O14629 (UniProtKB/Swiss-Prot),   Q9NRT0 (UniProtKB/Swiss-Prot),   Q99988 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000252809   ⟸   ENST00000252809
RefSeq Acc Id: ENSP00000470531   ⟸   ENST00000595973
RefSeq Acc Id: ENSP00000469819   ⟸   ENST00000597765
RefSeq Acc Id: XP_054178690   ⟸   XM_054322715
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99988-F1-model_v2 AlphaFold Q99988 1-308 view protein structure

Promoters
RGD ID:6795591
Promoter ID:HG_KWN:29301
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   Lymphoblastoid
Transcripts:NM_004864
Position:
Human AssemblyChrPosition (strand)Source
Build 361918,357,769 - 18,358,269 (+)MPROMDB
RGD ID:6811586
Promoter ID:HG_ACW:40498
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:GDF15.BAPR07-UNSPLICED
Position:
Human AssemblyChrPosition (strand)Source
Build 361918,360,076 - 18,360,576 (+)MPROMDB
RGD ID:7239139
Promoter ID:EPDNEW_H25315
Type:multiple initiation site
Name:GDF15_1
Description:growth differentiation factor 15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381918,386,158 - 18,386,218EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:30142 AgrOrtholog
COSMIC GDF15 COSMIC
Ensembl Genes ENSG00000130513 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000252809 ENTREZGENE
  ENST00000252809.3 UniProtKB/Swiss-Prot
  ENST00000595973 UniProtKB/TrEMBL
  ENST00000595973.3 UniProtKB/Swiss-Prot
  ENST00000597765.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.10.90.10 UniProtKB/Swiss-Prot
GTEx ENSG00000130513 GTEx
HGNC ID HGNC:30142 ENTREZGENE
Human Proteome Map GDF15 Human Proteome Map
InterPro Cystine-knot_cytokine UniProtKB/Swiss-Prot
  TGF-b_C UniProtKB/Swiss-Prot
  TGF-beta-rel UniProtKB/Swiss-Prot
KEGG Report hsa:9518 UniProtKB/Swiss-Prot
NCBI Gene 9518 ENTREZGENE
OMIM 605312 OMIM
PANTHER GROWTH/DIFFERENTIATION FACTOR 15 UniProtKB/Swiss-Prot
  PTHR11848 UniProtKB/Swiss-Prot
Pfam TGF_beta UniProtKB/Swiss-Prot
PharmGKB PA134866647 PharmGKB
PROSITE TGF_BETA_2 UniProtKB/Swiss-Prot
SMART TGFB UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot
UniProt A0A0A0MTT8_HUMAN UniProtKB/TrEMBL
  GDF15_HUMAN UniProtKB/Swiss-Prot
  O14629 ENTREZGENE
  P78360 ENTREZGENE
  Q99988 ENTREZGENE
  Q9BWA0 ENTREZGENE
  Q9NRT0 ENTREZGENE
UniProt Secondary O14629 UniProtKB/Swiss-Prot
  P78360 UniProtKB/Swiss-Prot
  Q9BWA0 UniProtKB/Swiss-Prot
  Q9NRT0 UniProtKB/Swiss-Prot