FKBP1AP2 (FKBP prolyl isomerase 1A pseudogene 2) - Rat Genome Database

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Gene: FKBP1AP2 (FKBP prolyl isomerase 1A pseudogene 2) Homo sapiens
Analyze
Symbol: FKBP1AP2
Name: FKBP prolyl isomerase 1A pseudogene 2
RGD ID: 1343039
HGNC Page HGNC:3715
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: FK506 binding protein 1A pseudogene 2; FKBP12; FKBP1P2
Related Functional Gene: FKBP1A  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381573,142,102 - 73,143,465 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1573,143,236 - 73,143,518 (-)EnsemblGRCh38hg38GRCh38
GRCh371573,434,443 - 73,435,806 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361573,434,433 - 73,435,986 (-)NCBINCBI36Build 36hg18NCBI36
Celera1550,312,988 - 50,314,541 (-)NCBICelera
Cytogenetic Map15q24.1NCBI
HuRef1550,265,972 - 50,267,335 (-)NCBIHuRef
CHM1_11573,552,442 - 73,553,805 (-)NCBICHM1_1
T2T-CHM13v2.01570,959,399 - 70,960,762 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:1716149  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:180
Count of miRNA genes:176
Interacting mature miRNAs:178
Transcripts:ENST00000560953
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 10 11 3 10 70 2 16 5 28 12 1 31
Below cutoff 278 165 112 28 64 14 600 138 412 24 150 132 14 68 336

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000560953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1573,143,236 - 73,143,518 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC FKBP1AP2 COSMIC
Ensembl Genes ENSG00000259691 Ensembl
GTEx ENSG00000259691 GTEx
HGNC ID HGNC:3715 ENTREZGENE
Human Proteome Map FKBP1AP2 Human Proteome Map
NCBI Gene 2283 ENTREZGENE
PharmGKB PA28156 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-06 FKBP1AP2  FKBP prolyl isomerase 1A pseudogene 2    FK506 binding protein 1A pseudogene 2  Symbol and/or name change 5135510 APPROVED
2015-11-17 FKBP1AP2  FK506 binding protein 1A pseudogene 2    FK506 binding protein 1A, 12kDa pseudogene 2  Symbol and/or name change 5135510 APPROVED
2011-07-27 FKBP1AP2  FK506 binding protein 1A, 12kDa pseudogene 2  FKBP1P2  FK506 binding protein 1 pseudogene 2  Symbol and/or name change 5135510 APPROVED