Or14j10e-ps1 (olfactory receptor family 14 subfamily J member 10E, pseudogene 1) - Rat Genome Database

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Gene: Or14j10e-ps1 (olfactory receptor family 14 subfamily J member 10E, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Or14j10e-ps1
Name: olfactory receptor family 14 subfamily J member 10E, pseudogene 1
RGD ID: 1333579
Description: olfactory receptor pseudogene
Type: pseudo (Ensembl: pseudogene)
RefSeq Status: REVIEWED
Previously known as: ENSRNOG00000070634; olfactory receptor pseudogene 1712; Olr1712-ps; ratchr20-884386-883448_ORF
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr820929,900 - 930,838 (-)NCBIGRCr8
mRatBN7.220924,644 - 925,582 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl20924,644 - 925,582 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl20924,644 - 925,582 (-)NCBImRatBN7.2 Ensembl
Rnor_6.0201,224,537 - 1,225,475 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0201,221,707 - 1,222,645 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.420883,448 - 884,386 (-)ENTREZGENERGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.120883,347 - 884,486 (-)NCBI
Celera201,664,008 - 1,664,946 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.

Genomics

Variants

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Variants in Or14j10e-ps1
30 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724519Bp144Blood pressure QTL 1440.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2013624629Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129191651Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129191651Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129191651Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129191651Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578807Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600972Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000072222
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl20924,644 - 925,582 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-5042 BioCyc
Ensembl Genes ENSRNOG00000070634 Ensembl, ENTREZGENE
NCBI Gene 294168 ENTREZGENE
PhenoGen Or14j10e-ps1 PhenoGen
RatGTEx ENSRNOG00000070634 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or14j10e-ps1  olfactory receptor family 14 subfamily J member 10E, pseudogene 1  Olr1712-ps  olfactory receptor pseudogene 1712  Symbol and Name Changed 1299863 APPROVED
2022-06-02 Olr1712-ps  olfactory receptor pseudogene 1712  ENSRNOG00000070634    Data merged from RGD:150343734 737654 PROVISIONAL
2021-08-31 ENSRNOG00000070634        Symbol and Name status set to provisional 45752 PROVISIONAL
2005-02-04 Olr1712-ps  olfactory receptor pseudogene 1712      Symbol and Name status set to approved 70820 APPROVED