ZBTB45 (zinc finger and BTB domain containing 45)

Gene: ZBTB45 (zinc finger and BTB domain containing 45) Homo sapiens

Analyze

Symbol:

ZBTB45

Name:

zinc finger and BTB domain containing 45

RGD ID:

1322100

HGNC Page

HGNC:23715

Description:

Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; and regulation of immune system process. Predicted to be located in nucleus. Predicted to be active in nucleoplasm.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DKFZp547H249; FLJ14486; zinc finger and BTB domain-containing protein 45; zinc finger protein 499; ZNF499

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

ZBTB45P1 ZBTB45P2

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	58,513,530 - 58,542,718 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	58,513,530 - 58,538,911 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	59,024,897 - 59,054,085 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	63,716,709 - 63,722,733 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	63,716,708 - 63,722,733	NCBI
Celera	19	56,069,007 - 56,075,032 (-)	NCBI		Celera
Cytogenetic Map	19	q13.43	NCBI
HuRef	19	55,335,330 - 55,341,356 (-)	NCBI		HuRef
CHM1_1	19	59,018,859 - 59,024,884 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	61,609,523 - 61,640,397 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (ISO)

aflatoxin B1 (ISO)

amitrole (ISO)

arsane (EXP)

arsenic atom (EXP)

atrazine (EXP)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

bucladesine (EXP)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (EXP)

clofibrate (ISO)

clothianidin (EXP)

copper(II) sulfate (EXP)

dicrotophos (EXP)

doxorubicin (EXP)

folic acid (ISO)

gentamycin (ISO)

hydrogen peroxide (EXP)

inulin (ISO)

L-methionine (ISO)

medroxyprogesterone acetate (EXP)

methimazole (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (ISO)

sulfadimethoxine (ISO)

theophylline (EXP)

thioacetamide (ISO)

titanium dioxide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of transcription by RNA polymerase II (IBA)

nervous system development (IEA)

regulation of cytokine production (IBA)

regulation of immune system process (IBA)

Cellular Component

nucleoplasm (IBA)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IBA)

metal ion binding (IEA)

protein binding (IPI)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

sequence-specific double-stranded DNA binding (IDA)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:14702039	PMID:15489334	PMID:16169070	PMID:16344560	PMID:21873635	PMID:26841866	PMID:28473536	PMID:32296183	PMID:33961781	PMID:34857952	PMID:35906200

Genomics

Comparative Map Data

ZBTB45
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	58,513,530 - 58,542,718 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	58,513,530 - 58,538,911 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	59,024,897 - 59,054,085 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	63,716,709 - 63,722,733 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	63,716,708 - 63,722,733	NCBI
Celera	19	56,069,007 - 56,075,032 (-)	NCBI		Celera
Cytogenetic Map	19	q13.43	NCBI
HuRef	19	55,335,330 - 55,341,356 (-)	NCBI		HuRef
CHM1_1	19	59,018,859 - 59,024,884 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	61,609,523 - 61,640,397 (-)	NCBI		T2T-CHM13v2.0

Zbtb45
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	12,737,828 - 12,745,212 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	12,737,825 - 12,743,961 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	13,005,666 - 13,010,047 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	13,003,898 - 13,010,034 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	13,591,015 - 13,595,149 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	11,905,845 - 11,909,979 (-)	NCBI		MGSCv36	mm8
Celera	7	10,632,818 - 10,636,948 (-)	NCBI		Celera
Cytogenetic Map	7	A1	NCBI
cM Map	7	7.72	NCBI

Zbtb45
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	82,707,633 - 82,712,926 (-)	NCBI		GRCr8
mRatBN7.2	1	73,634,895 - 73,639,802 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	73,635,448 - 73,639,556 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	79,015,897 - 79,020,032 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	87,580,235 - 87,584,372 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	80,770,977 - 80,775,114 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	65,563,999 - 65,568,301 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	65,564,173 - 65,568,300 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	66,374,102 - 66,379,534 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	72,912,204 - 72,916,331 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	72,990,308 - 72,994,003 (+)	NCBI
Celera	1	60,199,904 - 60,204,031 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Zbtb45
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955584	1,126,657 - 1,130,975 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955584	1,126,657 - 1,131,471 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZBTB45
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	64,789,694 - 64,797,741 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	66,577,566 - 66,585,673 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	55,521,921 - 55,528,275 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	64,344,098 - 64,351,140 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	64,344,098 - 64,348,236 (-)	Ensembl	panpan1.1		panPan2

ZBTB45
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	99,428,388 - 99,434,382 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	99,427,807 - 99,438,944 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	99,825,062 - 99,832,423 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	100,039,925 - 100,047,291 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	100,041,887 - 100,056,901 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	99,685,272 - 99,692,632 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	99,398,103 - 99,405,462 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	100,152,739 - 100,160,101 (+)	NCBI		UU_Cfam_GSD_1.0

Zbtb45
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	217,992,339 - 218,019,625 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004937062	96,868 - 104,303 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004937062	99,735 - 104,194 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZBTB45
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	63,076,104 - 63,079,443 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	63,076,546 - 63,082,949 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ZBTB45
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	13,335,910 - 13,338,412 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	50,794,432 - 50,798,084 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666080	6,339,842 - 6,354,533 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zbtb45
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	56,210 - 78,711 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	72,524 - 77,451 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ZBTB45
38 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 19q13.33-13.43(chr19:50191219-58535818)x3	copy number gain	See cases [RCV000050883]	Chr19:50191219..58535818 [GRCh38] Chr19:50694476..59047185 [GRCh37] Chr19:55386288..63738997 [NCBI36] Chr19:19q13.33-13.43	pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:49907832-58557889)x3	copy number gain	See cases [RCV000052925]	Chr19:49907832..58557889 [GRCh38] Chr19:50411089..59069256 [GRCh37] Chr19:55102901..63761068 [NCBI36] Chr19:19q13.33-13.43	pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:51141518-58539965)x3	copy number gain	See cases [RCV000052926]	Chr19:51141518..58539965 [GRCh38] Chr19:51644775..59051332 [GRCh37] Chr19:56336587..63743144 [NCBI36] Chr19:19q13.41-13.43	pathogenic
GRCh38/hg38 19q13.43(chr19:56363208-58581203)x3	copy number gain	See cases [RCV000052927]	Chr19:56363208..58581203 [GRCh38] Chr19:56874577..59092570 [GRCh37] Chr19:61566389..63784382 [NCBI36] Chr19:19q13.43	pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47908540-58539965)x3	copy number gain	See cases [RCV000052914]	Chr19:47908540..58539965 [GRCh38] Chr19:48411797..59051332 [GRCh37] Chr19:53103609..63743144 [NCBI36] Chr19:19q13.33-13.43	pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47929575-58572206)x3	copy number gain	See cases [RCV000052915]	Chr19:47929575..58572206 [GRCh38] Chr19:48432832..59083573 [GRCh37] Chr19:53124644..63775385 [NCBI36] Chr19:19q13.33-13.43	pathogenic
NM_032792.2(ZBTB45):c.817C>T (p.Leu273Phe)	single nucleotide variant	Malignant melanoma [RCV000072429]	Chr19:58516857 [GRCh38] Chr19:59028224 [GRCh37] Chr19:63720036 [NCBI36] Chr19:19q13.43	not provided
NM_032792.2(ZBTB45):c.349G>A (p.Glu117Lys)	single nucleotide variant	Malignant melanoma [RCV000072430]	Chr19:58517325 [GRCh38] Chr19:59028692 [GRCh37] Chr19:63720504 [NCBI36] Chr19:19q13.43	not provided
GRCh38/hg38 19q13.41-13.43(chr19:52612432-58581203)x3	copy number gain	See cases [RCV000134174]	Chr19:52612432..58581203 [GRCh38] Chr19:53115685..59092570 [GRCh37] Chr19:57807497..63784382 [NCBI36] Chr19:19q13.41-13.43	pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:52955056-58581203)x3	copy number gain	See cases [RCV000134139]	Chr19:52955056..58581203 [GRCh38] Chr19:53458309..59092570 [GRCh37] Chr19:58150121..63784382 [NCBI36] Chr19:19q13.41-13.43	pathogenic
GRCh38/hg38 19q13.43(chr19:58407283-58581129)x1	copy number loss	See cases [RCV000135198]	Chr19:58407283..58581129 [GRCh38] Chr19:58918650..59092496 [GRCh37] Chr19:63610462..63784308 [NCBI36] Chr19:19q13.43	likely benign
GRCh38/hg38 19q13.33-13.43(chr19:50152520-58581203)x3	copy number gain	See cases [RCV000135843]	Chr19:50152520..58581203 [GRCh38] Chr19:50655777..59092570 [GRCh37] Chr19:55347589..63784382 [NCBI36] Chr19:19q13.33-13.43	pathogenic
GRCh37/hg19 19q13.33-13.43(chr19:50489390-59095359)x3	copy number gain	See cases [RCV000445925]	Chr19:50489390..59095359 [GRCh37] Chr19:19q13.33-13.43	pathogenic
GRCh37/hg19 19q13.43(chr19:58980667-59030618)x3	copy number gain	See cases [RCV000445831]	Chr19:58980667..59030618 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1084C>T (p.Pro362Ser)	single nucleotide variant	Inborn genetic diseases [RCV003249803]	Chr19:58516590 [GRCh38] Chr19:59027957 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1034C>T (p.Pro345Leu)	single nucleotide variant	Inborn genetic diseases [RCV003264938]	Chr19:58516640 [GRCh38] Chr19:59028007 [GRCh37] Chr19:19q13.43	uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3	copy number gain	not provided [RCV000752444]	Chr19:260912..59097160 [GRCh37] Chr19:19p13.3-q13.43	pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3	copy number gain	not provided [RCV000752439]	Chr19:68029..59110290 [GRCh37] Chr19:19p13.3-q13.43	pathogenic
GRCh37/hg19 19q13.33-13.43(chr19:50740074-59097160)x3	copy number gain	not provided [RCV000740208]	Chr19:50740074..59097160 [GRCh37] Chr19:19q13.33-13.43	pathogenic
NM_001316979.2(ZBTB45):c.763G>A (p.Glu255Lys)	single nucleotide variant	Inborn genetic diseases [RCV003267377]	Chr19:58516911 [GRCh38] Chr19:59028278 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1064C>T (p.Ala355Val)	single nucleotide variant	Inborn genetic diseases [RCV003247982]	Chr19:58516610 [GRCh38] Chr19:59027977 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.821G>A (p.Arg274Gln)	single nucleotide variant	Inborn genetic diseases [RCV003251257]	Chr19:58516853 [GRCh38] Chr19:59028220 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1065G>A (p.Ala355=)	single nucleotide variant	not provided [RCV000961672]	Chr19:58516609 [GRCh38] Chr19:59027976 [GRCh37] Chr19:19q13.43	benign
NM_001316979.2(ZBTB45):c.496G>A (p.Gly166Ser)	single nucleotide variant	Inborn genetic diseases [RCV002859859]	Chr19:58517178 [GRCh38] Chr19:59028545 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1186C>T (p.Pro396Ser)	single nucleotide variant	Inborn genetic diseases [RCV002991237]	Chr19:58516488 [GRCh38] Chr19:59027855 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.478C>G (p.Arg160Gly)	single nucleotide variant	Inborn genetic diseases [RCV002818224]	Chr19:58517196 [GRCh38] Chr19:59028563 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.939A>G (p.Ile313Met)	single nucleotide variant	Inborn genetic diseases [RCV002776632]	Chr19:58516735 [GRCh38] Chr19:59028102 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.946G>A (p.Gly316Arg)	single nucleotide variant	Inborn genetic diseases [RCV002980883]	Chr19:58516728 [GRCh38] Chr19:59028095 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.370C>T (p.Arg124Cys)	single nucleotide variant	Inborn genetic diseases [RCV002976875]	Chr19:58517304 [GRCh38] Chr19:59028671 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.440C>T (p.Ala147Val)	single nucleotide variant	Inborn genetic diseases [RCV002977022]	Chr19:58517234 [GRCh38] Chr19:59028601 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.512G>A (p.Arg171His)	single nucleotide variant	Inborn genetic diseases [RCV002870621]	Chr19:58517162 [GRCh38] Chr19:59028529 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1163C>T (p.Pro388Leu)	single nucleotide variant	Inborn genetic diseases [RCV002802799]	Chr19:58516511 [GRCh38] Chr19:59027878 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.298C>G (p.Leu100Val)	single nucleotide variant	Inborn genetic diseases [RCV002850731]	Chr19:58517376 [GRCh38] Chr19:59028743 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.889G>A (p.Ala297Thr)	single nucleotide variant	Inborn genetic diseases [RCV002640934]	Chr19:58516785 [GRCh38] Chr19:59028152 [GRCh37] Chr19:19q13.43	likely benign
NM_001316979.2(ZBTB45):c.604G>T (p.Ala202Ser)	single nucleotide variant	Inborn genetic diseases [RCV002712944]	Chr19:58517070 [GRCh38] Chr19:59028437 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.532C>T (p.Arg178Cys)	single nucleotide variant	Inborn genetic diseases [RCV002697058]	Chr19:58517142 [GRCh38] Chr19:59028509 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.4G>A (p.Ala2Thr)	single nucleotide variant	Inborn genetic diseases [RCV002813492]	Chr19:58517670 [GRCh38] Chr19:59029037 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1309T>C (p.Trp437Arg)	single nucleotide variant	Inborn genetic diseases [RCV002807493]	Chr19:58514281 [GRCh38] Chr19:59025648 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.5C>T (p.Ala2Val)	single nucleotide variant	Inborn genetic diseases [RCV002725076]	Chr19:58517669 [GRCh38] Chr19:59029036 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1225C>T (p.Arg409Cys)	single nucleotide variant	Inborn genetic diseases [RCV003279490]	Chr19:58516449 [GRCh38] Chr19:59027816 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.898G>A (p.Glu300Lys)	single nucleotide variant	Inborn genetic diseases [RCV003212938]	Chr19:58516776 [GRCh38] Chr19:59028143 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.272C>T (p.Ser91Leu)	single nucleotide variant	Inborn genetic diseases [RCV003218322]	Chr19:58517402 [GRCh38] Chr19:59028769 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.625G>A (p.Glu209Lys)	single nucleotide variant	Inborn genetic diseases [RCV003208932]	Chr19:58517049 [GRCh38] Chr19:59028416 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1398G>C (p.Lys466Asn)	single nucleotide variant	Inborn genetic diseases [RCV003360228]	Chr19:58514192 [GRCh38] Chr19:59025559 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.155C>T (p.Ala52Val)	single nucleotide variant	Inborn genetic diseases [RCV003372350]	Chr19:58517519 [GRCh38] Chr19:59028886 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.1118A>T (p.Gln373Leu)	single nucleotide variant	Inborn genetic diseases [RCV003378234]	Chr19:58516556 [GRCh38] Chr19:59027923 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.208C>T (p.Arg70Cys)	single nucleotide variant	Inborn genetic diseases [RCV003362299]	Chr19:58517466 [GRCh38] Chr19:59028833 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.830G>A (p.Gly277Glu)	single nucleotide variant	Inborn genetic diseases [RCV003371262]	Chr19:58516844 [GRCh38] Chr19:59028211 [GRCh37] Chr19:19q13.43	uncertain significance
NM_001316979.2(ZBTB45):c.645C>T (p.Asp215=)	single nucleotide variant	not provided [RCV003884903]	Chr19:58517029 [GRCh38] Chr19:59028396 [GRCh37] Chr19:19q13.43	likely benign

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1701
Count of miRNA genes:	599
Interacting mature miRNAs:	678
Transcripts:	ENST00000354590, ENST00000594051, ENST00000596739, ENST00000600130, ENST00000600990
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

SHGC-57775

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	19	59,024,932 - 59,025,204	UniSTS	GRCh37
Build 36	19	63,716,744 - 63,717,016	RGD	NCBI36
Celera	19	56,069,042 - 56,069,314	RGD
Cytogenetic Map	19	q13.43	UniSTS
HuRef	19	55,335,365 - 55,335,637	UniSTS
TNG Radiation Hybrid Map	19	23410.0	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

1267

1135

668

542

2853

665

1605

163

905

990

329

1814

Low

1165

1841

1056

550

1392

429

1502

1527

2115

255

546

618

122

875

974

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001316978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_032792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006723445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054322426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC012313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC016630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK027392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK130056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL831909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AX882156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC024738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA394169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA649936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB043101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DR158681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY023937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY070267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000354590 ⟹ ENSP00000346603

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	58,513,530 - 58,519,554 (-)	Ensembl

RefSeq Acc Id:

ENST00000594051 ⟹ ENSP00000469089

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	58,513,530 - 58,519,810 (-)	Ensembl

RefSeq Acc Id:

ENST00000596739 ⟹ ENSP00000471885

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	58,517,623 - 58,519,559 (-)	Ensembl

RefSeq Acc Id:

ENST00000600130 ⟹ ENSP00000470316

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	58,517,309 - 58,538,911 (-)	Ensembl

RefSeq Acc Id:

ENST00000600990 ⟹ ENSP00000473072

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	58,513,566 - 58,519,751 (-)	Ensembl

RefSeq Acc Id:

NM_001316978 ⟹ NP_001303907

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,519,602 (-)	NCBI
CHM1_1	19	59,018,859 - 59,024,889 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,615,596 (-)	NCBI

Sequence:

show sequence

AGAGTGCGGGGTGGCAGCGGCGGGTCAGAGGGGTGCTTTGGGCGTAGGGTGGGGCGCGGGCAAT
GGAGCAGAGTATGGGAGAACGCGCTCGGAGTAAAGCACACGGCGCGGCGAAGGCGTGGCGGGAG
TGTGCGGCGCCGGACCCGGGAAGCTGGCCTGGGCGCCGGGTCTCGAGTGCAGGCCTTTGTTCTG
AAGTGTCCAGGCCGGCCTTGCGGCGTCGGGACTGAGGAATGGAGCCCGTCGCGGGGCGGGGCGG
GAAAGGAAGGTTCAAGTCTCTCGGGTTGATGCGCAAGTTTCCGTCCCCATCGGCCGGACAGATT
AGAATCCTTTCAGGTGCTAGGTGAATACAGATGGGGCGGTGCTGCTTGCTGAGTTAGCCTTTGC
GCGGGCACAGGCCTGGCTTTTTTGAGGCATTGCACAGAAGGCTCAGAACAGGGCCAGGGAGCGG
GGTGGTGTATCCGGATCCGTAGTCTGGAAAAGCTCCCTCTGGCTGCCGTGTGGGGAACAGAAGG
GGAGGCGAGGGGCGCAGAGACACCAGCCAGGTTTCTTCATCCGTCCAGGACAGCGGGAACGGGG
CAGTGGAGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTTCTCACGCTCTCT
GCTTGAGACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTGTGCGCATTCGT
GAAGCTTCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTTCCAAGACAAGC
TGCTGCTCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGACAGTGCGACAGCT
GGTAGAGTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTGCAGGTGCTCACG
GCCGCGTCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACGCAGATTATCGCCCGCGCTC
GAGCCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCCACTCGCACCTGC
GCAGCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCACCCCGGTGCTGCA
CACAGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAACACCTGCCAAGG
CTGAGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGTGACGAGGATGA
CGAGGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAGGCGAGGGCCAG
GCACCTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGACAGCGCGTGCG
AGGAGCCCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGATTTTCTTCGGGG
AGCTGGGTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCACTTGGCACGACGAGGATGGC
GCTGTCCCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGACTGCATACTGTCTGGATCCC
GCCCGCCTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCACTTGGGTGCCCC
TGGGCCACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCCCCACCCGCCTTC
TACCCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCCCGGCTCCCTCTG
CTGCTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGAGCCACCTACGTA
TGAGTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAGCACATGTTCATC
CACTCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCTACGCGACTACC
TGCTCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTCTGCGCCAAGCG
CTTCACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAGCGCGCGCCCTGC
CCCGCCTGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGCGGCGCACCCTG
CGCCCTGATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCCCGCACAGTCGGC
CACGCCCGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTGAGCGCAGGTCCT
CTCTCTCCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCTCTCCTCCATGTA
CTTGAACCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTTCTGAGAACTGGA
CTATTTCCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTTGACTCCGGTTCT
CACCCCGCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGCCCCAGGGTCAGG
CTGGGCAAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGCCTAAGGAGACTC
AAGTGGACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAAGGACTGTAGGC
CATGGGGCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

NM_001316979 ⟹ NP_001303908

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,519,810 (-)	NCBI
CHM1_1	19	59,018,859 - 59,025,339 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,615,804 (-)	NCBI

Sequence:

show sequence

AGTGCGGCCTTGTAGTCGGTCAGGAGGAAGCGGCCACGGCAGAGCCTGGTGCCTGAAGAGGAGT
CGGAGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTTCTCACGCTCTCTGCT
TGAGACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTGTGCGCATTCGTGAA
GCTTCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTTCCAAGACAAGCTGC
TGCTCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGACAGTGCGACAGCTGGT
AGAGTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTGCAGGTGCTCACGGCC
GCGTCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACGCAGATTATCGCCCGCGCTCGAG
CCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCCACTCGCACCTGCGCA
GCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCACCCCGGTGCTGCACAC
AGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAACACCTGCCAAGGCTG
AGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGTGACGAGGATGACGA
GGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAGGCGAGGGCCAGGCA
CCTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGACAGCGCGTGCGAGG
AGCCCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGATTTTCTTCGGGGAGC
TGGGTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCACTTGGCACGACGAGGATGGCGCT
GTCCCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGACTGCATACTGTCTGGATCCCGCC
CGCCTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCACTTGGGTGCCCCTGG
GCCACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCCCCACCCGCCTTCTAC
CCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCCCGGCTCCCTCTGCTG
CTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGAGCCACCTACGTATGA
GTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAGCACATGTTCATCCAC
TCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCTACGCGACTACCTGC
TCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTCTGCGCCAAGCGCTT
CACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAGCGCGCGCCCTGCCCC
GCCTGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGCGGCGCACCCTGCGC
CCTGATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCCCGCACAGTCGGCCAC
GCCCGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTGAGCGCAGGTCCTCTC
TCTCCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCTCTCCTCCATGTACTT
GAACCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTTCTGAGAACTGGACTA
TTTCCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTTGACTCCGGTTCTCAC
CCCGCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGCCCCAGGGTCAGGCTG
GGCAAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGCCTAAGGAGACTCAAG
TGGACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAAGGACTGTAGGCCAT
GGGGCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

NM_001316980 ⟹ NP_001303909

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,542,718 (-)	NCBI
CHM1_1	19	59,018,859 - 59,046,912 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,640,397 (-)	NCBI

Sequence:

show sequence

GGAGGGAAGCAGGGTGTGTGTGGGGAGAATCCTGTCTGAGGAGGGAAGCAGGGTGTGTGTGGGG
AGAATCCTGTCTGAGGAGGGAAGCAGGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGC
AGAACTTCTCACGCTCTCTGCTTGAGACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGA
CGTGACTGTGCGCATTCGTGAAGCTTCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCA
CCCTTCTTCCAAGACAAGCTGCTGCTCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCG
CGCAGACAGTGCGACAGCTGGTAGAGTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGA
AGCCCTGCAGGTGCTCACGGCCGCGTCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACG
CAGATTATCGCCCGCGCTCGAGCCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGC
CCCCGCCACTCGCACCTGCGCAGCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCC
GGGGCACCCCGGTGCTGCACACAGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCG
CCCCCAACACCTGCCAAGGCTGAGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATG
ACCGAGGTGACGAGGATGACGAGGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGG
CGGCCCAGGCGAGGGCCAGGCACCTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCT
GCTGCTGACAGCGCGTGCGAGGAGCCCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCG
GGAGAGATTTTCTTCGGGGAGCTGGGTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCAC
TTGGCACGACGAGGATGGCGCTGTCCCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGAC
TGCATACTGTCTGGATCCCGCCCGCCTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCC
CCTTTCACTTGGGTGCCCCTGGGCCACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCC
TGCGCCCCCACCCGCCTTCTACCCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGG
GAGGTCCCGGCTCCCTCTGCTGCTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAG
GTGCTGAGCCACCTACGTATGAGTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTA
CACCAAGCACATGTTCATCCACTCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCC
TTCTCTCTACGCGACTACCTGCTCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGT
GCGCCGTCTGCGCCAAGCGCTTCACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCG
GCCCGAGCGCGCGCCCTGCCCCGCCTGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGC
CACCTGGCGGCGCACCCTGCGCCCTGATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGG
GGCCTCCCGCACAGTCGGCCACGCCCGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTC
CCTCCTGAGCGCAGGTCCTCTCTCTCCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCT
TACTCCTCTCCTCCATGTACTTGAACCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAG
ACCACTTCTGAGAACTGGACTATTTCCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCC
AAGATTTGACTCCGGTTCTCACCCCGCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCT
TGCCTGCCCCAGGGTCAGGCTGGGCAAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCAT
GGGGCGCCTAAGGAGACTCAAGTGGACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCT
CTAATAAAGGACTGTAGGCCATGGGGCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

NM_001316981 ⟹ NP_001303910

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,519,810 (-)	NCBI
CHM1_1	19	59,018,859 - 59,025,339 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,615,804 (-)	NCBI

Sequence:

show sequence

AGTGCGGCCTTGTAGTCGGTCAGGAGGAAGCGGCCACGGCAGAGCCTGGTGCCTGAAGAGGAGT
CGGAGGTGGGGTCGAATGGGCATCCCCCTGCCGCAGGGCGGGCGAGGAGGCTGGGGCGTGCCAG
GGGAGGGGCACCTGCGCTCCGCTAGAAGCGCACGCTGAGAACGCGAGGGGGCGCTGCAGGACCG
GGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTTCTCACGCTCTCTGCTTGA
GACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTGTGCGCATTCGTGAAGCT
TCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTTCCAAGACAAGCTGCTGC
TCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGACAGTGCGACAGCTGGTAGA
GTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTGCAGGTGCTCACGGCCGCG
TCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACGCAGATTATCGCCCGCGCTCGAGCCC
CGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCCACTCGCACCTGCGCAGCT
GCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCACCCCGGTGCTGCACACAGC
CGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAACACCTGCCAAGGCTGAGG
GGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGTGACGAGGATGACGAGGA
AAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAGGCGAGGGCCAGGCACCT
CCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGACAGCGCGTGCGAGGAGC
CCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGATTTTCTTCGGGGAGCTGG
GTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCACTTGGCACGACGAGGATGGCGCTGTC
CCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGACTGCATACTGTCTGGATCCCGCCCGC
CTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCACTTGGGTGCCCCTGGGCC
ACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCCCCACCCGCCTTCTACCCC
ACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCCCGGCTCCCTCTGCTGCTC
CCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGAGCCACCTACGTATGAGTG
CAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAGCACATGTTCATCCACTCG
GGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCTACGCGACTACCTGCTCA
AACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTCTGCGCCAAGCGCTTCAC
GCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAGCGCGCGCCCTGCCCCGCC
TGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGCGGCGCACCCTGCGCCCT
GATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCCCGCACAGTCGGCCACGCC
CGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTGAGCGCAGGTCCTCTCTCT
CCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCTCTCCTCCATGTACTTGAA
CCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTTCTGAGAACTGGACTATTT
CCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTTGACTCCGGTTCTCACCCC
GCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGCCCCAGGGTCAGGCTGGGC
AAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGCCTAAGGAGACTCAAGTGG
ACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAAGGACTGTAGGCCATGGG
GCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

NM_001316982 ⟹ NP_001303911

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,538,911 (-)	NCBI
CHM1_1	19	59,018,859 - 59,044,147 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,634,802 (-)	NCBI

Sequence:

show sequence

GTTGAAAACGTGGTGGGTGGGTGCATTGAGGCTGGCCCCGGGGGGGTGGGCCTCAGCCCCCTGT
GCGGTGCCCCTGGGGTCGTGAGGTCTCCGGTCCAGGTGACAACGGCTGGGGGCGGGGTAGGTGG
CAGCTTCCGGAGGATGTTTGGAGGCCGCGAGGACTGGCGCGAACAACCATGAAACCCATTCGCC
ACTCCCAAGGCGCGCACAGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTTC
TCACGCTCTCTGCTTGAGACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTG
TGCGCATTCGTGAAGCTTCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTT
CCAAGACAAGCTGCTGCTCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGACA
GTGCGACAGCTGGTAGAGTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTGC
AGGTGCTCACGGCCGCGTCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACGCAGATTAT
CGCCCGCGCTCGAGCCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCCA
CTCGCACCTGCGCAGCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCACC
CCGGTGCTGCACACAGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAAC
ACCTGCCAAGGCTGAGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGT
GACGAGGATGACGAGGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAG
GCGAGGGCCAGGCACCTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGA
CAGCGCGTGCGAGGAGCCCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGAT
TTTCTTCGGGGAGCTGGGTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCACTTGGCACG
ACGAGGATGGCGCTGTCCCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGACTGCATACT
GTCTGGATCCCGCCCGCCTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCAC
TTGGGTGCCCCTGGGCCACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCCC
CACCCGCCTTCTACCCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCCC
GGCTCCCTCTGCTGCTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGAG
CCACCTACGTATGAGTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAGC
ACATGTTCATCCACTCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCT
ACGCGACTACCTGCTCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTC
TGCGCCAAGCGCTTCACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAGC
GCGCGCCCTGCCCCGCCTGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGC
GGCGCACCCTGCGCCCTGATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCCC
GCACAGTCGGCCACGCCCGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTGA
GCGCAGGTCCTCTCTCTCCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCTC
TCCTCCATGTACTTGAACCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTTC
TGAGAACTGGACTATTTCCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTTG
ACTCCGGTTCTCACCCCGCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGCC
CCAGGGTCAGGCTGGGCAAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGCC
TAAGGAGACTCAAGTGGACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAA
GGACTGTAGGCCATGGGGCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

NM_032792 ⟹ NP_116181

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,519,602 (-)	NCBI
GRCh37	19	59,024,897 - 59,031,845 (-)	NCBI
Build 36	19	63,716,709 - 63,722,733 (-)	NCBI Archive
Celera	19	56,069,007 - 56,075,032 (-)	RGD
HuRef	19	55,335,330 - 55,341,356 (-)	ENTREZGENE
CHM1_1	19	59,018,859 - 59,024,889 (-)	NCBI
T2T-CHM13v2.0	19	61,609,523 - 61,615,596 (-)	NCBI

Sequence:

show sequence

AGAGTGCGGGGTGGCAGCGGCGGGTCAGAGGGGTGCTTTGGGCGTAGGGTGGGGCGCGGGCAAT
GGAGCAGAGTATGGGAGAACGCGCTCGGAGTAAAGCACACGGCGCGGCGAAGGCGTGGCGGGAG
TGTGCGGCGCCGGACCCGGGAAGCTGGCCTGGGCGCCGGGTCTCGAGTGCAGGCCTTTGTTCTG
AAGTGTCCAGGCCGGCCTTGCGGCGTCGGGACTGAGGAATGGAGCCCGTCGCGGGGCGGGGCGG
GAAAGGAAGGTTCAAGTCTCTCGGGTTGATGCGCAAGTTTCCGTCCCCATCGGCCGGACAGATT
AGAATCCTTTCAGGTGCTAGATGGCGGCTGCAGAGGCTGTGCATCACATACACCTGCAGAACTT
CTCACGCTCTCTGCTTGAGACCCTCAATGGGCAGAGGCTTGGGGGACACTTCTGTGACGTGACT
GTGCGCATTCGTGAAGCTTCGCTGCGTGCCCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCT
TCCAAGACAAGCTGCTGCTCGGCCACTCTGAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGAC
AGTGCGACAGCTGGTAGAGTTCCTGTACAGCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTG
CAGGTGCTCACGGCCGCGTCAGTGCTTCGCATACAGACAGTTATCGACGAATGCACGCAGATTA
TCGCCCGCGCTCGAGCCCCGGGCACCTCTGCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCC
ACTCGCACCTGCGCAGCTGCGTCACCGCCTGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCAC
CCCGGTGCTGCACACAGCCGTAAGCAGCGCCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAA
CACCTGCCAAGGCTGAGGGGCCTGATGCTGACCCCTCACTGTCCGCGGCCCCTGATGACCGAGG
TGACGAGGATGACGAGGAAAGTGACGATGAGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCA
GGCGAGGGCCAGGCACCTCCTTCCTTCCCAGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTG
ACAGCGCGTGCGAGGAGCCCCCTGCACCCACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGA
TTTTCTTCGGGGAGCTGGGTCAGCTGAGGACGTATTTCCAGACAGCTATGTATCCACTTGGCAC
GACGAGGATGGCGCTGTCCCCGAAGGCTGTCCCACTGAGACCCCTGTCCAGCCCGACTGCATAC
TGTCTGGATCCCGCCCGCCTGGTGTGAAGACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCA
CTTGGGTGCCCCTGGGCCACCCGCACCACCCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCC
CCACCCGCCTTCTACCCCACACTCCAGCCCGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCC
CGGCTCCCTCTGCTGCTCCCACCACGGCCCCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGA
GCCACCTACGTATGAGTGCAGCCACTGTCGCAAGACGTTCAGCTCCCGGAAAAACTACACCAAG
CACATGTTCATCCACTCGGGGGAGAAGCCGCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTC
TACGCGACTACCTGCTCAAACACATGGTCACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGT
CTGCGCCAAGCGCTTCACGCAGAAGAGCTCGCTCAACGTGCACATGCGCACTCACCGGCCCGAG
CGCGCGCCCTGCCCCGCCTGCGGCAAGGTCTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGG
CGGCGCACCCTGCGCCCTGATGGCGCTGGGGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCC
CGCACAGTCGGCCACGCCCGCTGCGGGACCCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTG
AGCGCAGGTCCTCTCTCTCCCTTCACCCTTTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCT
CTCCTCCATGTACTTGAACCCTCCAGGTGGTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTT
CTGAGAACTGGACTATTTCCTGCGTAAACCGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTT
GACTCCGGTTCTCACCCCGCCCTCTCCTGGGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGC
CCCAGGGTCAGGCTGGGCAAGGTCCCTAGCTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGC
CTAAGGAGACTCAAGTGGACCCATCATATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAA
AGGACTGTAGGCCATGGGGCCTAAACCACGAA

hide sequence

RefSeq Acc Id:

XM_006723445 ⟹ XP_006723508

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,513,530 - 58,519,602 (-)	NCBI

Sequence:

show sequence

GGTCAGAGGGGTGCTTTGGGCGTAGGGTGGGGCGCGGGCAATGGAGCAGAGTATGGGAGAACGC
GCTCGGAGTAAAGCACACGGCGCGGCGAAGGCGTGGCGGGAGTGTGCGGCGCCGGACCCGGGAA
GCTGGCCTGGGCGCCGGGTCTCGAGTGCAGGCCTTTGTTCTGAAGTGTCCAGGCCGGCCTTGCG
GCGTCGGGACTGAGGAATGGAGCCCGTCGCGGGGCGGGGCGGGAAAGGAAGGTTCAAGTCTCTC
GGGTTGATGCGCAAGTTTCCGTCCCCATCGGCCGGACAGATTAGAATCCTTTCAGATGGCGGCT
GCAGAGGCTGTGCATCACATACACCTGCAGAACTTCTCACGCTCTCTGCTTGAGACCCTCAATG
GGCAGAGGCTTGGGGGACACTTCTGTGACGTGACTGTGCGCATTCGTGAAGCTTCGCTGCGTGC
CCACCGCTGCGTGCTGGCGGCCGGCTCACCCTTCTTCCAAGACAAGCTGCTGCTCGGCCACTCT
GAGATCCGTGTGCCTCCGGTGGTGCCCGCGCAGACAGTGCGACAGCTGGTAGAGTTCCTGTACA
GCGGTTCGCTCGTTGTGGCGCAGGGTGAAGCCCTGCAGGTGCTCACGGCCGCGTCAGTGCTTCG
CATACAGACAGTTATCGACGAATGCACGCAGATTATCGCCCGCGCTCGAGCCCCGGGCACCTCT
GCGCCCACGCCCCTGCCCACCCCTGTGCCCCCGCCACTCGCACCTGCGCAGCTGCGTCACCGCC
TGCGCCACCTGCTGGCTGCACGTCCCCCGGGGCACCCCGGTGCTGCACACAGCCGTAAGCAGCG
CCAGCCCGCGCGTTTGCAGCTGCCAGCGCCCCCAACACCTGCCAAGGCTGAGGGGCCTGATGCT
GACCCCTCACTGTCCGCGGCCCCTGATGACCGAGGTGACGAGGATGACGAGGAAAGTGACGATG
AGACCGATGGCGAGGATGGCGAAGGTGGCGGCCCAGGCGAGGGCCAGGCACCTCCTTCCTTCCC
AGACTGTGCTGCTGGCTTCCTCACTGCTGCTGCTGACAGCGCGTGCGAGGAGCCCCCTGCACCC
ACTGGCCTCGCTGACTACAGTGGTGCCGGGAGAGATTTTCTTCGGGGAGCTGGGTCAGCTGAGG
ACGTATTTCCAGACAGCTATGTATCCACTTGGCACGACGAGGATGGCGCTGTCCCCGAAGGCTG
TCCCACTGAGACCCCTGTCCAGCCCGACTGCATACTGTCTGGATCCCGCCCGCCTGGTGTGAAG
ACCCCAGGGCCGCCCGTTGCACTCTTCCCCTTTCACTTGGGTGCCCCTGGGCCACCCGCACCAC
CCCCTTCAGCACCATCGGGGCCAGCCCCTGCGCCCCCACCCGCCTTCTACCCCACACTCCAGCC
CGAGGCAGCCCCCAGTACTCAGCTGGGGGAGGTCCCGGCTCCCTCTGCTGCTCCCACCACGGCC
CCCTCAGGCACCCCTGCTCGCACCCCAGGTGCTGAGCCACCTACGTATGAGTGCAGCCACTGTC
GCAAGACGTTCAGCTCCCGGAAAAACTACACCAAGCACATGTTCATCCACTCGGGGGAGAAGCC
GCACCAGTGCGCCGTGTGCTGGCGATCCTTCTCTCTACGCGACTACCTGCTCAAACACATGGTC
ACGCACACCGGCGTGCGCGCCTTCCAGTGCGCCGTCTGCGCCAAGCGCTTCACGCAGAAGAGCT
CGCTCAACGTGCACATGCGCACTCACCGGCCCGAGCGCGCGCCCTGCCCCGCCTGCGGCAAGGT
CTTCTCGCACCGCGCGCTGCTGGAGCGCCACCTGGCGGCGCACCCTGCGCCCTGATGGCGCTGG
GGCCTGGCCTCGCCCACGGTGGATCCGGGGCCTCCCGCACAGTCGGCCACGCCCGCTGCGGGAC
CCGTGGTTCCCGCCACTAGACCACGCTCCCTCCTGAGCGCAGGTCCTCTCTCTCCCTTCACCCT
TTCTCCATACCAGGGCCTAAGTCCGCCTTACTCCTCTCCTCCATGTACTTGAACCCTCCAGGTG
GTGCCGGGCTGGGGCTGGGGCTGGTTAGACCACTTCTGAGAACTGGACTATTTCCTGCGTAAAC
CGGGCGCTCAGGCGCTTGGACCCGGCCCAAGATTTGACTCCGGTTCTCACCCCGCCCTCTCCTG
GGGTGGTGGTGGGGGCTGGGGGGCCGCTTGCCTGCCCCAGGGTCAGGCTGGGCAAGGTCCCTAG
CTCTCTACCCAAGCTGTTACTCCCTCATGGGGCGCCTAAGGAGACTCAAGTGGACCCATCATAT
ATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAAGGACTGTAGGCCATGGGGCCTAAACCAC
GAA

hide sequence

RefSeq Acc Id:

XM_054322426 ⟹ XP_054178401

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	19	61,609,523 - 61,615,612 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001303907	(Get FASTA)	NCBI Sequence Viewer
	NP_001303908	(Get FASTA)	NCBI Sequence Viewer
	NP_001303909	(Get FASTA)	NCBI Sequence Viewer
	NP_001303910	(Get FASTA)	NCBI Sequence Viewer
	NP_001303911	(Get FASTA)	NCBI Sequence Viewer
	NP_116181	(Get FASTA)	NCBI Sequence Viewer
	XP_006723508	(Get FASTA)	NCBI Sequence Viewer
	XP_054178401	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH24738	(Get FASTA)	NCBI Sequence Viewer
	BAB55079	(Get FASTA)	NCBI Sequence Viewer
	CAD38572	(Get FASTA)	NCBI Sequence Viewer
	CAE91462	(Get FASTA)	NCBI Sequence Viewer
	EAW72602	(Get FASTA)	NCBI Sequence Viewer
	EAW72603	(Get FASTA)	NCBI Sequence Viewer
	EAW72604	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000346603
	ENSP00000346603.2
	ENSP00000469089
	ENSP00000469089.1
	ENSP00000470316.1
	ENSP00000471885.1
	ENSP00000473072
	ENSP00000473072.1
GenBank Protein	Q96K62	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_116181 ⟸ NM_032792

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:	XP_006723508 ⟸ XM_006723445
- Peptide Label:	isoform X1
- UniProtKB:	Q96K62 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP hide sequence

RefSeq Acc Id:

NP_001303909 ⟸ NM_001316980

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:

NP_001303911 ⟸ NM_001316982

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:

NP_001303908 ⟸ NM_001316979

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:

NP_001303910 ⟸ NM_001316981

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:

NP_001303907 ⟸ NM_001316978

- UniProtKB:

Q96K62 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAEAVHHIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREASLRAHRCVLAAGSPFFQDKLLL
GHSEIRVPPVVPAQTVRQLVEFLYSGSLVVAQGEALQVLTAASVLRIQTVIDECTQIIARARAP
GTSAPTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG
PDADPSLSAAPDDRGDEDDEESDDETDGEDGEGGGPGEGQAPPSFPDCAAGFLTAAADSACEEP
PAPTGLADYSGAGRDFLRGAGSAEDVFPDSYVSTWHDEDGAVPEGCPTETPVQPDCILSGSRPP
GVKTPGPPVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAP
TTAPSGTPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIHSGEKPHQCAVCWRSFSLRDYLLK
HMVTHTGVRAFQCAVCAKRFTQKSSLNVHMRTHRPERAPCPACGKVFSHRALLERHLAAHPAP

hide sequence

RefSeq Acc Id:

ENSP00000471885 ⟸ ENST00000596739

RefSeq Acc Id:

ENSP00000470316 ⟸ ENST00000600130

RefSeq Acc Id:

ENSP00000473072 ⟸ ENST00000600990

RefSeq Acc Id:

ENSP00000346603 ⟸ ENST00000354590

RefSeq Acc Id:

ENSP00000469089 ⟸ ENST00000594051

RefSeq Acc Id:	XP_054178401 ⟸ XM_054322426
- Peptide Label:	isoform X1
- UniProtKB:	Q96K62 (UniProtKB/Swiss-Prot)

Protein Domains

BTB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q96K62-F1-model_v2	AlphaFold	Q96K62	1-511	view protein structure

Promoters

RGD ID:

13206013

Promoter ID:

EPDNEW_H26587

Type:

initiation region

Name:

ZBTB45_1

Description:

zinc finger and BTB domain containing 45

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	58,519,559 - 58,519,619	EPDNEW

RGD ID:

6811830

Promoter ID:

HG_ACW:42866

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, Lymphoblastoid, NB4

Transcripts:

ZBTB45.EAPR07-UNSPLICED

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	19	63,717,149 - 63,717,649 (-)	MPROMDB

RGD ID:

6814671

Promoter ID:

HG_XEF:4314

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Jurkat, K562, NB4

Transcripts:

NM_001091311, NM_205706

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	19	63,721,534 - 63,722,034 (-)	MPROMDB

RGD ID:

6796245

Promoter ID:

HG_KWN:31250

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_032792, UC002QTE.1, UC002QTF.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	19	63,722,456 - 63,723,262 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:23715	AgrOrtholog
COSMIC	ZBTB45	COSMIC
Ensembl Genes	ENSG00000119574	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000354590	ENTREZGENE
	ENST00000354590.7	UniProtKB/Swiss-Prot
	ENST00000594051	ENTREZGENE
	ENST00000594051.6	UniProtKB/Swiss-Prot
	ENST00000596739.1	UniProtKB/TrEMBL
	ENST00000600130.1	UniProtKB/TrEMBL
	ENST00000600990	ENTREZGENE
	ENST00000600990.1	UniProtKB/Swiss-Prot
Gene3D-CATH	Classic Zinc Finger	UniProtKB/Swiss-Prot
GTEx	ENSG00000119574	GTEx
HGNC ID	HGNC:23715	ENTREZGENE
Human Proteome Map	ZBTB45	Human Proteome Map
InterPro	BTB/POZ_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SKP1/BTB/POZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/Swiss-Prot
	Znf_C2H2_type	UniProtKB/Swiss-Prot
KEGG Report	hsa:84878	UniProtKB/Swiss-Prot
NCBI Gene	84878	ENTREZGENE
PANTHER	AGAP004733-PA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZGC:76872	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/Swiss-Prot
PharmGKB	PA162409464	PharmGKB
PROSITE	BTB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/Swiss-Prot
	ZINC_FINGER_C2H2_2	UniProtKB/Swiss-Prot
SMART	BTB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54695	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF57667	UniProtKB/Swiss-Prot
UniProt	M0QZ57_HUMAN	UniProtKB/TrEMBL
	M0R1I4_HUMAN	UniProtKB/TrEMBL
	Q96K62	ENTREZGENE, UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar