PPIAP84 (peptidylprolyl isomerase A pseudogene 84) - Rat Genome Database

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Gene: PPIAP84 (peptidylprolyl isomerase A pseudogene 84) Homo sapiens
Analyze
Symbol: PPIAP84
Name: peptidylprolyl isomerase A pseudogene 84
RGD ID: 13209041
HGNC Page HGNC:53708
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: PPIA  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38830,349,866 - 30,350,347 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl830,349,866 - 30,350,347 (-)EnsemblGRCh38hg38GRCh38
GRCh37830,207,382 - 30,207,863 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8p12NCBI
T2T-CHM13v2.0830,628,770 - 30,629,251 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:113
Count of miRNA genes:112
Interacting mature miRNAs:113
Transcripts:ENST00000519658
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 444 334 209 14 23 7 816 266 402 24 188 346 7 246 632
Below cutoff 875 767 473 146 142 76 1292 556 641 134 485 482 70 589 776

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000519658
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl830,349,866 - 30,350,347 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC PPIAP84 COSMIC
Ensembl Genes ENSG00000254152 Ensembl, ENTREZGENE
GTEx ENSG00000254152 GTEx
HGNC ID HGNC:53708 ENTREZGENE
Human Proteome Map PPIAP84 Human Proteome Map
NCBI Gene PPIAP84 ENTREZGENE