S100A5 (S100 calcium binding protein A5)

Gene: S100A5 (S100 calcium binding protein A5) Homo sapiens

Analyze

Symbol:

S100A5

Name:

S100 calcium binding protein A5

RGD ID:

1319090

HGNC Page

HGNC:10495

Description:

Enables metal ion binding activity and protein homodimerization activity. Located in nucleus.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

protein S100-A5; S100 calcium-binding protein A5; S100D

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	153,537,147 - 153,543,685 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	153,537,147 - 153,541,765 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	153,509,623 - 153,514,285 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	151,776,247 - 151,780,865 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	150,322,695 - 150,327,314	NCBI
Celera	1	126,580,884 - 126,585,501 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	124,872,886 - 124,877,501 (-)	NCBI		HuRef
CHM1_1	1	154,905,588 - 154,910,190 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	152,674,403 - 152,680,771 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (IAGP)

immunodeficiency 42 (IAGP)

MHC class II deficiency (IAGP)

middle cerebral artery infarction (EXP)

parathyroid carcinoma (IAGP)

severe congenital neutropenia 3 (IAGP)

severe congenital neutropenia 5 (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-palmitoylglycerol (EXP)

4,4'-diaminodiphenylmethane (ISO)

5-aza-2'-deoxycytidine (EXP)

6-propyl-2-thiouracil (ISO)

all-trans-retinoic acid (EXP)

alpha-Zearalanol (ISO)

amitrole (ISO)

ammonium chloride (ISO)

arsane (EXP)

arsenic atom (EXP)

arsenite(3-) (EXP)

atrazine (ISO)

benzo[a]pyrene (EXP)

bisphenol A (EXP,ISO)

cadmium atom (EXP)

CGP 52608 (EXP)

chromium(6+) (ISO)

clothianidin (EXP)

copper(II) sulfate (EXP)

Cuprizon (ISO)

diuron (ISO)

endosulfan (ISO)

fulvestrant (EXP)

methimazole (ISO)

perfluorohexanesulfonic acid (ISO)

pirinixic acid (EXP,ISO)

pregnenolone 16alpha-carbonitrile (ISO)

sodium arsenite (ISO)

sodium dodecyl sulfate (EXP)

trichloroethene (ISO)

valproic acid (EXP,ISO)

zinc atom (EXP)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

neuronal cell body (IEA)

nucleus (IBA,IDA)

Molecular Function

calcium ion binding (IBA,IDA,IEA)

calcium-dependent protein binding (IBA)

copper ion binding (IDA)

metal ion binding (IEA)

protein binding (IPI)

protein homodimerization activity (IPI)

transition metal ion binding (IEA)

zinc ion binding (IDA)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Gastrointestinal stroma tumor (IAGP)

Parathyroid carcinoma (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7759097	PMID:8341667	PMID:8701470	PMID:9920416	PMID:10882717	PMID:11510959	PMID:11855835	PMID:12118070	PMID:12477932	PMID:12645008	PMID:16710414	PMID:19536568
PMID:19601998	PMID:19668339	PMID:21873635	PMID:27297108	PMID:28017722	PMID:29240404	PMID:31837246	PMID:33528559	PMID:33961781	PMID:34349018

Genomics

Comparative Map Data

S100A5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	153,537,147 - 153,543,685 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	153,537,147 - 153,541,765 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	153,509,623 - 153,514,285 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	151,776,247 - 151,780,865 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	150,322,695 - 150,327,314	NCBI
Celera	1	126,580,884 - 126,585,501 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	124,872,886 - 124,877,501 (-)	NCBI		HuRef
CHM1_1	1	154,905,588 - 154,910,190 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	152,674,403 - 152,680,771 (-)	NCBI		T2T-CHM13v2.0

S100a5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	90,513,787 - 90,519,091 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	90,515,830 - 90,519,087 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	90,606,480 - 90,611,784 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	90,608,523 - 90,611,780 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	90,412,444 - 90,415,702 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	90,694,449 - 90,697,703 (+)	NCBI		MGSCv36	mm8
Celera	3	90,649,926 - 90,653,182 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.27	NCBI

S100a5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	178,392,922 - 178,397,128 (+)	NCBI		GRCr8
mRatBN7.2	2	176,095,332 - 176,099,546 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	176,097,539 - 176,099,546 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	183,237,760 - 183,239,767 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	181,260,026 - 181,262,033 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	175,859,884 - 175,861,891 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	189,999,669 - 190,005,877 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	190,003,223 - 190,005,871 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	209,435,794 - 209,439,970 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	182,891,664 - 182,893,671 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	182,841,801 - 182,843,785 (+)	NCBI
Celera	2	170,032,266 - 170,034,273 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

S100a5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	187,147 - 190,143 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	187,159 - 190,399 (-)	NCBI	ChiLan1.0	ChiLan1.0

S100A5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	96,292,234 - 96,296,801 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	96,027,413 - 96,031,983 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	128,892,317 - 128,896,879 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	132,521,394 - 132,525,991 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	132,521,394 - 132,525,991 (-)	Ensembl	panpan1.1		panPan2

S100A5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	43,497,738 - 43,501,010 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	43,491,466 - 43,500,936 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	42,990,715 - 42,993,827 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	43,446,738 - 43,450,669 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	43,447,481 - 43,450,593 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	43,149,752 - 43,152,863 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	43,203,621 - 43,206,733 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	43,487,268 - 43,490,380 (+)	NCBI		UU_Cfam_GSD_1.0

S100a5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	24,319,261 - 24,323,562 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	3,349,641 - 3,353,697 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	3,349,655 - 3,353,601 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

S100A5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	96,094,147 - 96,096,870 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	96,093,204 - 96,096,870 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	104,902,421 - 104,905,256 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

S100A5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	10,260,479 - 10,267,615 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	10,263,814 - 10,266,685 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	9,653,234 - 9,658,345 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

S100a5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	3,593,083 - 3,596,633 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	3,591,615 - 3,596,224 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in S100A5
6 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh37/hg19 1q21.1-23.1(chr1:144368497-158992086)x3	copy number gain	not specified [RCV003986717]	Chr1:144368497..158992086 [GRCh37] Chr1:1q21.1-23.1	pathogenic
GRCh37/hg19 1q21.3(chr1:153354333-153703053)x3	copy number gain	not specified [RCV003987106]	Chr1:153354333..153703053 [GRCh37] Chr1:1q21.3	uncertain significance
GRCh37/hg19 1q21.1-23.1(chr1:146577511-157155587)x3	copy number gain	not specified [RCV003987261]	Chr1:146577511..157155587 [GRCh37] Chr1:1q21.1-23.1	pathogenic
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3	copy number gain	See cases [RCV000143515]	Chr1:149854269..180267197 [GRCh38] Chr1:149825831..180236332 [GRCh37] Chr1:148092455..178502955 [NCBI36] Chr1:1q21.2-25.2	pathogenic
NM_001394232.1(S100A5):c.150C>G (p.Ser50Arg)	single nucleotide variant	not specified [RCV004447244]	Chr1:153537425 [GRCh38] Chr1:153509901 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.59C>T (p.Ser20Leu)	single nucleotide variant	not specified [RCV004447245]	Chr1:153540133 [GRCh38] Chr1:153512609 [GRCh37] Chr1:1q21.3	uncertain significance
GRCh37/hg19 1q21.3(chr1:153412418-153604246)x3	copy number gain	Breast ductal adenocarcinoma [RCV000207267]	Chr1:153412418..153604246 [GRCh37] Chr1:1q21.3	uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3	copy number gain	See cases [RCV000510383]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)	copy number gain	See cases [RCV000510926]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1q21.3(chr1:150853044-154647786)x3	copy number gain	not provided [RCV000684655]	Chr1:150853044..154647786 [GRCh37] Chr1:1q21.3	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3	copy number gain	not provided [RCV000736295]	Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3	copy number gain	not provided [RCV000736305]	Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1q21.3(chr1:153488723-153750339)x3	copy number gain	not provided [RCV000749192]	Chr1:153488723..153750339 [GRCh37] Chr1:1q21.3	benign
GRCh37/hg19 1q21.3(chr1:153321482-153835605)x3	copy number gain	not provided [RCV000847221]	Chr1:153321482..153835605 [GRCh37] Chr1:1q21.3	uncertain significance
GRCh37/hg19 1q21.3(chr1:153061323-153904594)x3	copy number gain	not provided [RCV001005141]	Chr1:153061323..153904594 [GRCh37] Chr1:1q21.3	uncertain significance
NC_000001.10:g.(?_130980840)_(248900000_?)dup	duplication	Gastrointestinal stromal tumor [RCV001300221]\|Parathyroid carcinoma [RCV001341077]	Chr1:130980840..248900000 [GRCh37] Chr1:1q12-44	uncertain significance
NC_000001.10:g.(?_149895434)_(156851434_?)dup	duplication	Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001958273]\|Congenital neutropenia-myelofibrosis-nephromegaly syndrome [RCV001958271]\|Kostmann syndrome [RCV003120769]\|MHC class II deficiency [RCV001992607]	Chr1:149895434..156851434 [GRCh37] Chr1:1q21.2-23.1	uncertain significance
NM_001394232.1(S100A5):c.73A>G (p.Ser25Gly)	single nucleotide variant	not specified [RCV004141666]	Chr1:153540119 [GRCh38] Chr1:153512595 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.190G>A (p.Asp64Asn)	single nucleotide variant	not specified [RCV004237591]	Chr1:153537385 [GRCh38] Chr1:153509861 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.35T>C (p.Met12Thr)	single nucleotide variant	not specified [RCV004088546]	Chr1:153540157 [GRCh38] Chr1:153512633 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.156C>G (p.Ile52Met)	single nucleotide variant	not specified [RCV004191775]	Chr1:153537419 [GRCh38] Chr1:153509895 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.191A>T (p.Asp64Val)	single nucleotide variant	not specified [RCV004131353]	Chr1:153537384 [GRCh38] Chr1:153509860 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.251A>G (p.Asn84Ser)	single nucleotide variant	not specified [RCV004214903]	Chr1:153537324 [GRCh38] Chr1:153509800 [GRCh37] Chr1:1q21.3	uncertain significance
GRCh37/hg19 1q12-23.1(chr1:142535935-157648813)x3	copy number gain	Chromosome 1q21.1 duplication syndrome [RCV003329522]	Chr1:142535935..157648813 [GRCh37] Chr1:1q12-23.1	pathogenic
GRCh37/hg19 1q21.3(chr1:153460453-153737619)x3	copy number gain	not provided [RCV003484040]	Chr1:153460453..153737619 [GRCh37] Chr1:1q21.3	uncertain significance
NM_001394232.1(S100A5):c.91A>T (p.Arg31Trp)	single nucleotide variant	not specified [RCV004447247]	Chr1:153540101 [GRCh38] Chr1:153512577 [GRCh37] Chr1:1q21.3	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	945
Count of miRNA genes:	307
Interacting mature miRNAs:	318
Transcripts:	ENST00000359215, ENST00000368717, ENST00000368718
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

STS-Z18949

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	153,509,661 - 153,509,780	UniSTS	GRCh37
Build 36	1	151,776,285 - 151,776,404	RGD	NCBI36
Celera	1	126,580,922 - 126,581,041	RGD
Cytogenetic Map	1	q21	UniSTS
HuRef	1	124,872,924 - 124,873,043	UniSTS
GeneMap99-GB4 RH Map	1	554.06	UniSTS
NCBI RH Map	1	1187.2	UniSTS

RH70249

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	153,516,093 - 153,516,237	UniSTS	GRCh37
Build 36	1	151,782,717 - 151,782,861	RGD	NCBI36
Celera	1	126,587,353 - 126,587,497	RGD
Cytogenetic Map	1	q21	UniSTS
HuRef	1	124,879,353 - 124,879,497	UniSTS
GeneMap99-GB4 RH Map	1	555.98	UniSTS
NCBI RH Map	1	1259.0	UniSTS

GDB:230308

Human Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	1	q21	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

Low

697

1096

728

1133

1755

213

824

277

528

1132

279

1077

Below cutoff

1575

1412

516

257

611

136

2004

1244

1906

123

721

328

121

841

1208

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001394232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001394233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001394234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_002962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011509860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017002029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017002031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017002032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054338110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054338111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054338112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AX038698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC093955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC093957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX470102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z18949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z18950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z18954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000368717 ⟹ ENSP00000357706

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	153,537,147 - 153,540,934 (-)	Ensembl

RefSeq Acc Id:

ENST00000368718 ⟹ ENSP00000357707

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	153,537,147 - 153,541,765 (-)	Ensembl

RefSeq Acc Id:

NM_001394232 ⟹ NP_001381161

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,540,934 (-)	NCBI
T2T-CHM13v2.0	1	152,674,403 - 152,678,190 (-)	NCBI

Sequence:

show sequence

ATCTGTCTCTTCCCTTGGCTGAGGGTGGCTGTGCTATTGGAATCCAGGCCCTTATTCAAGCGTA
GCCTCTGGATCCAGGTTTTGGAATGATCCTGGAGATTTCAAGAGGCCCCCTGCCCTCCCTGCCC
GCTGACCCGTCTCTGTGTGCACTGCTCTGGGCCAGAGTCTGGAGACCAGCTGGGCCAGCTCAGC
TCACCTCCCTGCTGCTCCTTGTTGAGACCCCATCACCCAGTTCCAGCCCAGCCCCCTCTCAGCC
CTGGACTCTCTCTTTGCCCTGTCCCCGACTTTAATAATGGGACACTCCTCGATATCAGAGCTGC
ACACTGTGATGGAGACTCCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATA
TTCGGGGAGAGAGGGTAGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAA
GAGCTGTGTCTTGGGGAGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGA
ACAGCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTA
CAACGACTTCTTTCTAGAGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCT
TTGCTGCTGACCTCGGCTGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCC
CAGATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGA

hide sequence

RefSeq Acc Id:

NM_001394233 ⟹ NP_001381162

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,540,934 (-)	NCBI
T2T-CHM13v2.0	1	152,674,403 - 152,678,190 (-)	NCBI

Sequence:

show sequence

ATCTGTCTCTTCCCTTGGCTGAGGGTGGCTGTGCTATTGGAATCCAGGCCCTTATTCAAGCGTA
GCCTCTGGATCCAGGTTTTGGAATGATCCTGGAGATTTCAAGAGGCCCCCTGCCCTCCCTGCCC
GCTGACCCGTCTCTGTGTGCACTGCTCTGGGCCAGAGTCTGGAGACCAGCTGGGCCAGCTCAGC
TCACCTCCCTGCTGCTCCTTGTTGAGACCCCATCACCCAGTTCCAGCCCAGCCCCCTCTCAGCC
CTGGACTCTCTCTTTGCCCTGTCCCCGACTTTAATAATGGGACACTCCTCGATATCAGGTGATT
CAGGCACTGGGGGAAAGGCTGGTGAACTGCCTGTGGAAAACCAGTTCCTAAGCTGGAAGAAGCA
GAGAGAAAATCGTGACCCTTGATCTGCTCCACCATCTGCCACCAGGGCCTTTTGAGGAGGTCGT
CTTCTCATCTTTCTGCCTCAGGCCTACTTTTCAACAACTCCCCAGCAGGAGAGTCTGTGGTCTC
CTTTGGGGTCTTGCTGTTCTCCTTGTACCAGCAGCTCCAGAGTTTGTTGTGGGTCTCATTGTAA
CCTGTACTGATATAGATGGGCGCTCTTGTTAGTGGATTTCAGTCTCATCCTGGGTTCCAGTCTC
TTGTTCTTTGAGGGAGGGGCCTCAGAGGTAGGCTAGTGCTGCTGGTGGTGACTTCCTGAGGAAT
GGGATCTTCCCCTCTCCCTCTACAGAGCTGCACACTGTGATGGAGACTCCTCTGGAGAAGGCCC
TGACCACTATGGTGACCACGTTTCACAAATATTCGGGGAGAGAGGGTAGCAAACTGACCCTGAG
TAGGAAGGAACTCAAGGAGCTGATCAAGAAAGAGCTGTGTCTTGGGGAGATGAAGGAGAGCAGC
ATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGATCGACTTCAAGGAGTACT
CGGTGTTCCTGACCATGCTGTGCATGGCCTACAACGACTTCTTTCTAGAGGACAACAAGTGACC
AGGGCTGCCCTCCACCCTCACCCTCCACCCTTTGCTGCTGACCTCGGCTGCTCCTCTCACAGAC
CCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCAGATGGACCCTTCCATGGGAGGAAATAAAGTT
TCCATCGCAGGTGCTGGGA

hide sequence

RefSeq Acc Id:

NM_001394234 ⟹ NP_001381163

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,541,809 (-)	NCBI
T2T-CHM13v2.0	1	152,674,403 - 152,679,065 (-)	NCBI

Sequence:

show sequence

GTGGAGAGCTTCCTAGGACACGGGGAGATGGTGCCCTGTGTTTGTCCCACACTTCTGAGGTTTT
CTTTCCAGGACAGCCTGGTTTCCCTTCTTCGGCTTATTGTTCCATCAGATTTCAGATTTTGAGT
TCTGATTTTTGGTCAGAAGAGTAAAGTTTCTGGGATTGGGGACGTGTGTGCTATGGGAACTCAG
TGTGTCCCCAGCCCTTGTTTGTAAACAAGGAAGGTGAGATTGGCAGAAGGGGTTTCTCCCCAGC
TCCATCCCGGGAGGCTCTGACGTGGGCATCCTCAAGTCCCCAACAACTTCTCATGGGCCCTTTC
TCTCCCCTGGATTCCTAGGGACAGAGATCAGGGAAATAAAGGCAGAAGGCAGTGAGAGGGAGGC
TATGCCTGCTGCTTGGATTCTCTGGGCTCACTCCCACAGTGAGCTGCACACTGTGATGGAGACT
CCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATATTCGGGGAGAGAGGGTA
GCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAAGAGCTGTGTCTTGGGGA
GATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGATC
GACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACAACGACTTCTTTCTAG
AGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCTTTGCTGCTGACCTCGGC
TGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCAGATGGACCCTTCCAT
GGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGA

hide sequence

RefSeq Acc Id:

NM_002962 ⟹ NP_002953

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,541,809 (-)	NCBI
GRCh37	1	153,509,623 - 153,515,772 (-)	NCBI
Build 36	1	151,776,247 - 151,780,865 (-)	NCBI Archive
HuRef	1	124,872,886 - 124,877,501 (-)	ENTREZGENE
CHM1_1	1	154,905,588 - 154,910,190 (-)	NCBI
T2T-CHM13v2.0	1	152,674,403 - 152,679,065 (-)	NCBI

Sequence:

show sequence

GTGGAGAGCTTCCTAGGACACGGGGAGATGGTGCCCTGTGTTTGTCCCACACTTCTGAGGTTTT
CTTTCCAGGACAGCCTGGTTTCCCTTCTTCGGCTTATTGTTCCATCAGATTTCAGATTTTGAGT
TCTGATTTTTGGTCAGAAGAGTAAAGTTTCTGGGATTGGGGACGTGTGTGCTATGGGAACTCAG
TGTGTCCCCAGCCCTTGTTTGTAAACAAGGAAGGGACAGAGATCAGGGAAATAAAGGCAGAAGG
CAGTGAGAGGGAGGCTATGCCTGCTGCTTGGATTCTCTGGGCTCACTCCCACAGTGAGCTGCAC
ACTGTGATGGAGACTCCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATATT
CGGGGAGAGAGGGTAGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAAGA
GCTGTGTCTTGGGGAGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAAC
AGCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACA
ACGACTTCTTTCTAGAGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCTTT
GCTGCTGACCTCGGCTGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCA
GATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGA

hide sequence

RefSeq Acc Id:

XM_017002029 ⟹ XP_016857518

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,543,685 (-)	NCBI

Sequence:

show sequence

GCAGACCAGTGAAGTTAGGGGAGGGATGCAGGGTGACTAACAGTGTGTGTGCACAGGCAATAGA
GTTCACTCGGTGTGGTCAAAGCCGAGAAGGGGACCCCTCACCACCCCCCTGCCAAGGTTTGGAA
GGTCCCAGCTGTGGGATCTCAGCCAGCCCACTTACCCCTCCCACCTCTCTCCAACCTTGCCTCT
GGCAGGATCTTGAACCGAGGCTGGAATTGAAGGTCATATCTGTTCCTGGTTGGGGTCTGGAATG
GAGTTTGGGTGTCCTGGGAGGACAGAGATCAGGGAAATAAAGGCAGAAGGCAGTGAGAGGGAGG
CTATGCCTGCTGCTTGGATTCTCTGGGCTCACTCCCACAGTGAGCTGCACACTGTGATGGAGAC
TCCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATATTCGGGGAGAGAGGGT
AGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAAGAGCTGTGTCTTGGGG
AGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAGAT
CGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACAACGACTTCTTTCTA
GAGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCTTTGCTGCTGACCTCGG
CTGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCAGATGGACCCTTCCA
TGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGAGTCTGGTTTTGAAGCTGTCTTGTCTACC
TTGGC

hide sequence

RefSeq Acc Id:

XM_017002031 ⟹ XP_016857520

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,540,455 (-)	NCBI

Sequence:

show sequence

CCTTCCTTCCTATGTCTCTGTTCATCTGATATCTGGTGGGTCACGCTGGATGATGAGGGTGACA
AGTGGTGGTGACCTCCACCAAGGAGGCCTGGCCCCACAAGCGGGCATGCGCTCAGGGAGAAGAG
GGCAGAGCCTTTGGAATTTCTTGAGAAATGGCTCTGGGGTGGAGGTGGGGGTCTGGACTAGCCA
GGATGCTCCTGCAGGTGCACAGAGTCCCTTGCCTTCAACTGTGGTCCCAGCTGAGTCTCCTTGA
GGTGGGAGAGGCTGAGGTTTTTGTGGTGGGAGAGGAATGATGGGTCTGGTTCAAGAATGGCAGG
GAGGGCTTTGGGCTGGAGGTGAAGACTCTCCACAGATTTAACCTGCAGCCTTCAAGTTCCGTGG
GTGTTGCCTCCTTCCTCCCTGAGGGGGAAGTGGTTTTTGAGTCTGAGTCACTTGAGCTCCATCT
GTCTCTTCCCTTGGCTGAGGGTGGCTGTGCTATTGGAATCCAGGCCCTTATTCAAGCGTAGCCT
CTGGATCCAGGTTTTGGAATGATCCTGGAGATTTCAAGAGGCCCCCTGCCCTCCCTGCCCGCTG
ACCCGTCTCTGTGTGCACTGCTCTGGGCCAGAGTCTGGAGACCAGCTGGGCCAGCTCAGCTCAC
CTCCCTGCTGCTCCTTGTTGAGACCCCATCACCCAGTTCCAGCCCAGCCCCCTCTCAGCCCTGG
ACTCTCTCTTTGCCCTGTCCCCGACTTTAATAATGGGACACTCCTCGATATCAGGTGATTCAGG
CACTGGGGGAAAGGCTGGTGAACTGCCTGTGGAAAACCAGTTCCTAAGCTGGAAGAAGCAGAGA
GAAAATCGTGACCCTTGATCTGCTCCACCATCTGCCACCAGGGCCTTTTGAGGAGGTCGTCTTC
TCATCTTTCTGCCTCAGGCCTACTTTTCAACAACTCCCCAGCAGGAGAGTCTGTGGTCTCCTTT
GGGGTCTTGCTGTTCTCCTTGTACCAGCAGCTCCAGAGTTTGTTAGCTGCACACTGTGATGGAG
ACTCCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATATTCGGGGAGAGAGG
GTAGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAAGAGCTGTGTCTTGG
GGAGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACAGCGACCAGGAG
ATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACAACGACTTCTTTC
TAGAGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCTTTGCTGCTGACCTC
GGCTGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCAGATGGACCCTTC
CATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGAGTCTGGTTTTGAAGCTGTCTTGTCTA
CCTTGGC

hide sequence

RefSeq Acc Id:

XM_017002032 ⟹ XP_016857521

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,537,147 - 153,540,664 (-)	NCBI

Sequence:

show sequence

CCTTCCTTCCTATGTCTCTGTTCATCTGATATCTGGTGGGTCACGCTGGATGATGAGGGTGACA
AGTGGTGGTGACCTCCACCAAGGAGGCCTGGCCCCACAAGCGGGCATGCGCTCAGGGAGAAGAG
GGCAGAGCCTTTGGAATTTCTTGAGAAATGGCTCTGGGGTGGAGGTGGGGGTCTGGACTAGCCA
GGATGCTCCTGCAGGTGCACAGAGTCCCTTGCCTTCAACTGTGGTCCCAGCTGAGTCTCCTTGA
GGTGGGAGAGGCTGAGGTTTTTGTGGTGGGAGAGGAATGATGGGTCTGGTTCAAGAATGGCAGG
GAGGGCTTTGGGCTGGAGGTGAAGACTCTCCACAGATTTAACCTGCAGCCTTCAAGTTCCGTGG
GTGTTGCCTCCTTCCTCCCTGAGGGGGAAGTGGTTTTTGAGTCTGAGTCACTTGAGCTCCATCT
GTCTCTTCCCTTGGCTGAGGGTGGCTGTGCTATTGGAATCCAGGCCCTTATTCAAGCGTAGCCT
CTGGATCCAGGTTTTGGAATGATCCTGGAGATTTCAAGAGGCCCCCTGCCCTCCCTGCCCGCTG
ACCCGTCTCTGTGTGCACTGCTCTGGGCCAGAGTCTGGAGACCAGCTGGGCCAGCTCAGCTCAC
CTCCCTGCTGCTCCTTGTTGAGACCCCATCACCCAGTTCCAGCCCAGCCCCCTCTCAGCCCTGG
ACTCTCTCTTTGCCCTGTCCCCGACTTTAATAATGGGACACTCCTCGATATCAGGTGATTCAGG
CACTGGGGGAAAGGCTGGTGAACTGCCTGTGGAAAACCAGTTCCTAAGCTGGAAGAAGCAGAGA
GAAAATCGTGACCCTTGATCTGCTCCACCATCTGCCACCAGGGCCTTTTGAGGAGAGCTGCACA
CTGTGATGGAGACTCCTCTGGAGAAGGCCCTGACCACTATGGTGACCACGTTTCACAAATATTC
GGGGAGAGAGGGTAGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGCTGATCAAGAAAGAG
CTGTGTCTTGGGGAGATGAAGGAGAGCAGCATCGATGACTTGATGAAGAGCCTGGACAAGAACA
GCGACCAGGAGATCGACTTCAAGGAGTACTCGGTGTTCCTGACCATGCTGTGCATGGCCTACAA
CGACTTCTTTCTAGAGGACAACAAGTGACCAGGGCTGCCCTCCACCCTCACCCTCCACCCTTTG
CTGCTGACCTCGGCTGCTCCTCTCACAGACCCTCTTTGGCCCCCTGCCCTCCTCTCCCTCCCAG
ATGGACCCTTCCATGGGAGGAAATAAAGTTTCCATCGCAGGTGCTGGGAGTCTGGTTTTGAAGC
TGTCTTGTCTACCTTGGC

hide sequence

RefSeq Acc Id:

XM_054338110 ⟹ XP_054194085

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	152,674,403 - 152,680,771 (-)	NCBI

RefSeq Acc Id:

XM_054338111 ⟹ XP_054194086

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	152,674,403 - 152,677,911 (-)	NCBI

RefSeq Acc Id:

XM_054338112 ⟹ XP_054194087

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	152,674,403 - 152,677,696 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001381161	(Get FASTA)	NCBI Sequence Viewer
	NP_001381162	(Get FASTA)	NCBI Sequence Viewer
	NP_001381163	(Get FASTA)	NCBI Sequence Viewer
	NP_002953	(Get FASTA)	NCBI Sequence Viewer
	XP_016857518	(Get FASTA)	NCBI Sequence Viewer
	XP_016857520	(Get FASTA)	NCBI Sequence Viewer
	XP_016857521	(Get FASTA)	NCBI Sequence Viewer
	XP_054194085	(Get FASTA)	NCBI Sequence Viewer
	XP_054194086	(Get FASTA)	NCBI Sequence Viewer
	XP_054194087	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH93955	(Get FASTA)	NCBI Sequence Viewer
	AAH93957	(Get FASTA)	NCBI Sequence Viewer
	CAA79472	(Get FASTA)	NCBI Sequence Viewer
	CAA79475	(Get FASTA)	NCBI Sequence Viewer
	CAA79479	(Get FASTA)	NCBI Sequence Viewer
	CAC16551	(Get FASTA)	NCBI Sequence Viewer
	EAW53316	(Get FASTA)	NCBI Sequence Viewer
	EAW53317	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000357706
	ENSP00000357706.2
	ENSP00000357707
	ENSP00000357707.1
GenBank Protein	P33763	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_002953 ⟸ NM_002962
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSD QEIDFKEYSVFLTMLCMAYNDFFLEDNK hide sequence

RefSeq Acc Id:	XP_016857518 ⟸ XM_017002029
- Peptide Label:	isoform X1
- Sequence:	show sequence MEFGCPGRTEIREIKAEGSEREAMPAAWILWAHSHSELHTVMETPLEKALTTMVTTFHKYSGRE GSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTMLCMAYNDFF LEDNK hide sequence

RefSeq Acc Id:	XP_016857521 ⟸ XM_017002032
- Peptide Label:	isoform X2
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSD QEIDFKEYSVFLTMLCMAYNDFFLEDNK hide sequence

RefSeq Acc Id:	XP_016857520 ⟸ XM_017002031
- Peptide Label:	isoform X2
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSD QEIDFKEYSVFLTMLCMAYNDFFLEDNK hide sequence

RefSeq Acc Id:

ENSP00000357707 ⟸ ENST00000368718

RefSeq Acc Id:

ENSP00000357706 ⟸ ENST00000368717

RefSeq Acc Id:	NP_001381163 ⟸ NM_001394234
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001381161 ⟸ NM_001394232
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001381162 ⟸ NM_001394233
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_054194085 ⟸ XM_054338110
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_054194086 ⟸ XM_054338111
- Peptide Label:	isoform X2
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_054194087 ⟸ XM_054338112
- Peptide Label:	isoform X2
- UniProtKB:	Q52LE7 (UniProtKB/Swiss-Prot), P33763 (UniProtKB/Swiss-Prot), Q5RHS3 (UniProtKB/Swiss-Prot)

Protein Domains

EF-hand

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P33763-F1-model_v2	AlphaFold	P33763	1-92	view protein structure

Promoters

RGD ID:

6785392

Promoter ID:

HG_KWN:5184

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Lymphoblastoid

Transcripts:

ENST00000368717

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	151,779,781 - 151,780,281 (-)	MPROMDB

RGD ID:

6857204

Promoter ID:

EPDNEW_H1767

Type:

initiation region

Name:

S100A5_2

Description:

S100 calcium binding protein A5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H1768

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,541,809 - 153,541,869	EPDNEW

RGD ID:

6857206

Promoter ID:

EPDNEW_H1768

Type:

initiation region

Name:

S100A5_1

Description:

S100 calcium binding protein A5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H1767

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	153,543,319 - 153,543,379	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:10495	AgrOrtholog
COSMIC	S100A5	COSMIC
Ensembl Genes	ENSG00000196420	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000368717	ENTREZGENE
	ENST00000368717.3	UniProtKB/Swiss-Prot
	ENST00000368718	ENTREZGENE
	ENST00000368718.5	UniProtKB/Swiss-Prot
Gene3D-CATH	EF-hand	UniProtKB/Swiss-Prot
GTEx	ENSG00000196420	GTEx
HGNC ID	HGNC:10495	ENTREZGENE
Human Proteome Map	S100A5	Human Proteome Map
InterPro	EF-hand-dom_pair	UniProtKB/Swiss-Prot
	EF_Hand_1_Ca_BS	UniProtKB/Swiss-Prot
	EF_hand_dom	UniProtKB/Swiss-Prot
	S-100_dom	UniProtKB/Swiss-Prot
	S100/CaBP-9k_CS	UniProtKB/Swiss-Prot
	S100_Ca-bd_sub	UniProtKB/Swiss-Prot
KEGG Report	hsa:6276	UniProtKB/Swiss-Prot
NCBI Gene	6276	ENTREZGENE
OMIM	176991	OMIM
PANTHER	PTHR11639:SF65	UniProtKB/Swiss-Prot
	S100 CALCIUM-BINDING PROTEIN	UniProtKB/Swiss-Prot
Pfam	S_100	UniProtKB/Swiss-Prot
PharmGKB	PA34907	PharmGKB
PROSITE	EF_HAND_1	UniProtKB/Swiss-Prot
	EF_HAND_2	UniProtKB/Swiss-Prot
	S100_CABP	UniProtKB/Swiss-Prot
SMART	EFh	UniProtKB/Swiss-Prot
	S_100	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF47473	UniProtKB/Swiss-Prot
UniProt	P33763	ENTREZGENE
	Q52LE7	ENTREZGENE
	Q5RHS3	ENTREZGENE
	S10A5_HUMAN	UniProtKB/Swiss-Prot
UniProt Secondary	Q52LE7	UniProtKB/Swiss-Prot
	Q5RHS3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Human Phenotype Annotations - ClinVar

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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