C1QTNF6 (C1q and TNF related 6) - Rat Genome Database

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Gene: C1QTNF6 (C1q and TNF related 6) Homo sapiens
Analyze
Symbol: C1QTNF6
Name: C1q and TNF related 6
RGD ID: 1316024
HGNC Page HGNC:14343
Description: Enables identical protein binding activity. Predicted to be located in extracellular region and membrane. Predicted to be part of collagen trimer. Predicted to be active in extracellular space.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C1q and tumor necrosis factor related protein 6; complement C1q tumor necrosis factor-related protein 6; complement-c1q tumor necrosis factor-related protein 6; CTFP6; CTRP6; ZACRP6
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382237,180,166 - 37,199,423 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2237,180,166 - 37,199,385 (-)EnsemblGRCh38hg38GRCh38
GRCh372237,576,206 - 37,595,463 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362235,906,152 - 35,914,276 (-)NCBINCBI36Build 36hg18NCBI36
Build 342235,900,705 - 35,908,830NCBI
Celera2221,377,248 - 21,385,372 (-)NCBICelera
Cytogenetic Map22q12.3NCBI
HuRef2220,541,201 - 20,549,321 (-)NCBIHuRef
CHM1_12237,535,430 - 37,543,555 (-)NCBICHM1_1
T2T-CHM13v2.02237,640,085 - 37,659,343 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Long non-coding RNA H19 promotes leukocyte inflammation in ischemic stroke by targeting the miR-29b/C1QTNF6 axis. Li G, etal., CNS Neurosci Ther. 2022 Jun;28(6):953-963. doi: 10.1111/cns.13829. Epub 2022 Mar 24.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:12975309   PMID:15340161   PMID:15461802   PMID:15489334   PMID:18978792   PMID:19073967   PMID:19430480   PMID:20203524   PMID:20410501   PMID:21508531  
PMID:21516116   PMID:21873635   PMID:22493691   PMID:23612905   PMID:24324551   PMID:24709693   PMID:25416956   PMID:25962701   PMID:26404464   PMID:26496610   PMID:26648301   PMID:27155158  
PMID:28665696   PMID:28726640   PMID:30083983   PMID:30431096   PMID:31111552   PMID:31292940   PMID:32041782   PMID:32077518   PMID:32170998   PMID:32282241   PMID:32296183   PMID:33123583  
PMID:33245899   PMID:33269376   PMID:33961781   PMID:34469206   PMID:34632797   PMID:34964705   PMID:35397057   PMID:35696571   PMID:36217029   PMID:36348139   PMID:38084702  


Genomics

Comparative Map Data
C1QTNF6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382237,180,166 - 37,199,423 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2237,180,166 - 37,199,385 (-)EnsemblGRCh38hg38GRCh38
GRCh372237,576,206 - 37,595,463 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362235,906,152 - 35,914,276 (-)NCBINCBI36Build 36hg18NCBI36
Build 342235,900,705 - 35,908,830NCBI
Celera2221,377,248 - 21,385,372 (-)NCBICelera
Cytogenetic Map22q12.3NCBI
HuRef2220,541,201 - 20,549,321 (-)NCBIHuRef
CHM1_12237,535,430 - 37,543,555 (-)NCBICHM1_1
T2T-CHM13v2.02237,640,085 - 37,659,343 (-)NCBIT2T-CHM13v2.0
C1qtnf6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391578,407,546 - 78,416,370 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1578,407,546 - 78,415,616 (-)EnsemblGRCm39 Ensembl
GRCm381578,523,346 - 78,532,170 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1578,523,346 - 78,531,416 (-)EnsemblGRCm38mm10GRCm38
MGSCv371578,354,516 - 78,360,047 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361578,350,603 - 78,356,820 (-)NCBIMGSCv36mm8
Celera1579,986,693 - 79,992,223 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1537.55NCBI
C1qtnf6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87111,958,348 - 111,964,948 (-)NCBIGRCr8
mRatBN7.27110,077,867 - 110,084,584 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7110,077,878 - 110,084,412 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7111,829,119 - 111,835,684 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07114,052,656 - 114,059,221 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07114,020,380 - 114,026,937 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07119,746,150 - 119,752,727 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7119,746,118 - 119,753,290 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07119,734,788 - 119,741,338 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47116,479,791 - 116,486,309 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17116,515,477 - 116,527,616 (-)NCBI
Celera7106,415,858 - 106,422,374 (-)NCBICelera
Cytogenetic Map7q34NCBI
C1qtnf6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541323,661,788 - 23,669,793 (-)NCBIChiLan1.0ChiLan1.0
C1QTNF6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22347,036,414 - 47,054,987 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12249,724,990 - 49,737,297 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02218,093,940 - 18,112,459 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12235,928,835 - 35,944,252 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2235,928,835 - 35,937,021 (-)Ensemblpanpan1.1panPan2
C1QTNF6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11027,340,547 - 27,349,183 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1027,340,623 - 27,348,494 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1027,295,314 - 27,303,889 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01028,132,649 - 28,141,218 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1028,132,870 - 28,140,526 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11027,854,319 - 27,862,880 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01028,163,042 - 28,171,611 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01028,340,907 - 28,349,476 (+)NCBIUU_Cfam_GSD_1.0
C1qtnf6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494510,748,476 - 10,754,930 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364923,757,939 - 3,765,381 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364923,759,056 - 3,765,345 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C1QTNF6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl510,601,762 - 10,608,777 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1510,601,869 - 10,606,886 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.258,196,870 - 8,201,888 (+)NCBISscrofa10.2Sscrofa10.2susScr3
C1QTNF6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11919,883,376 - 19,892,321 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1919,883,432 - 19,891,914 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045105,936,366 - 105,944,831 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
C1qtnf6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475210,631,568 - 10,641,482 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475210,631,609 - 10,640,988 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in C1QTNF6
25 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 22q12.3-13.1(chr22:35333993-38900177)x1 copy number loss See cases [RCV000051364] Chr22:35333993..38900177 [GRCh38]
Chr22:35729986..39296182 [GRCh37]
Chr22:34059986..37626128 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36552376-37669915)x1 copy number loss See cases [RCV000051365] Chr22:36552376..37669915 [GRCh38]
Chr22:36948423..38065922 [GRCh37]
Chr22:35278369..36395868 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36859030-39236985)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051366]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051366]|See cases [RCV000051366] Chr22:36859030..39236985 [GRCh38]
Chr22:37255072..39632990 [GRCh37]
Chr22:35585018..37962936 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:37124249-37580757)x3 copy number gain See cases [RCV000051123] Chr22:37124249..37580757 [GRCh38]
Chr22:37520289..37976764 [GRCh37]
Chr22:35850235..36306710 [NCBI36]
Chr22:22q12.3-13.1		 uncertain significance
GRCh38/hg38 22q12.3-13.33(chr22:33768441-50739977)x3 copy number gain See cases [RCV000051682] Chr22:33768441..50739977 [GRCh38]
Chr22:34164428..51178405 [GRCh37]
Chr22:32494428..49525271 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36068124-38002382)x3 copy number gain See cases [RCV000051683] Chr22:36068124..38002382 [GRCh38]
Chr22:36464172..38398389 [GRCh37]
Chr22:34794118..36728335 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.33(chr22:37061769-50738932)x3 copy number gain See cases [RCV000051684] Chr22:37061769..50738932 [GRCh38]
Chr22:37457809..51177360 [GRCh37]
Chr22:35787755..49524226 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916608-50739836)x3 copy number gain See cases [RCV000133646] Chr22:16916608..50739836 [GRCh38]
Chr22:17397498..51178264 [GRCh37]
Chr22:15777498..49525130 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916743-50739785)x3 copy number gain See cases [RCV000134730] Chr22:16916743..50739785 [GRCh38]
Chr22:17397633..51178213 [GRCh37]
Chr22:15777633..49525079 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q11.21-12.3(chr22:20907226-37187347)x3 copy number gain See cases [RCV000137926] Chr22:20907226..37187347 [GRCh38]
Chr22:21261514..37583387 [GRCh37]
Chr22:19591514..35913333 [NCBI36]
Chr22:22q11.21-12.3		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36904830-37555510)x1 copy number loss See cases [RCV000139238] Chr22:36904830..37555510 [GRCh38]
Chr22:37300872..37951517 [GRCh37]
Chr22:35630818..36281463 [NCBI36]
Chr22:22q12.3-13.1		 uncertain significance
GRCh37/hg19 22q12.3-13.1(chr22:37090025-39601950)x3 copy number gain See cases [RCV000446037] Chr22:37090025..39601950 [GRCh37]
Chr22:22q12.3-13.1		 uncertain significance
GRCh37/hg19 22q12.3-13.1(chr22:35680095-38098981)x1 copy number loss See cases [RCV000207444] Chr22:35680095..38098981 [GRCh37]
Chr22:22q12.3-13.1		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:37485062-37618530)x3 copy number gain Premature ovarian failure [RCV000225127] Chr22:37485062..37618530 [GRCh37]
Chr22:22q12.3-13.1		 uncertain significance
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51237518)x3 copy number gain See cases [RCV000240091] Chr22:16054691..51237518 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.3-13.33(chr22:35728929-51220961)x3 copy number gain See cases [RCV000240469] Chr22:35728929..51220961 [GRCh37]
Chr22:22q12.3-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51220902)x3 copy number gain See cases [RCV000446956] Chr22:16054691..51220902 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51237463)x3 copy number gain See cases [RCV000448847] Chr22:16054691..51237463 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:36877226-38548989)x1 copy number loss See cases [RCV000512008] Chr22:36877226..38548989 [GRCh37]
Chr22:22q12.3-13.1		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16888900-51197838) copy number gain See cases [RCV000510873] Chr22:16888900..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
NM_031910.4(C1QTNF6):c.472G>A (p.Glu158Lys) single nucleotide variant Inborn genetic diseases [RCV003292590] Chr22:37182553 [GRCh38]
Chr22:37578593 [GRCh37]
Chr22:22q12.3		 uncertain significance
GRCh37/hg19 22q11.1-13.33(chr22:16888900-51197838)x3 copy number gain See cases [RCV000512333] Chr22:16888900..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:35674826-39466442)x3 copy number gain See cases [RCV000512385] Chr22:35674826..39466442 [GRCh37]
Chr22:22q12.3-13.1		 likely pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054667-51243435)x3 copy number gain not provided [RCV000741689] Chr22:16054667..51243435 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16114244-51195728)x3 copy number gain not provided [RCV000741691] Chr22:16114244..51195728 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16114244-51211392)x3 copy number gain not provided [RCV000741692] Chr22:16114244..51211392 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
NM_031910.4(C1QTNF6):c.19C>T (p.Arg7Cys) single nucleotide variant Inborn genetic diseases [RCV003266356] Chr22:37188195 [GRCh38]
Chr22:37584235 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.90A>G (p.Ala30=) single nucleotide variant not provided [RCV000888431] Chr22:37185417 [GRCh38]
Chr22:37581457 [GRCh37]
Chr22:22q12.3		 benign
GRCh37/hg19 22q11.1-13.33(chr22:16888899-51197838)x3 copy number gain not provided [RCV000846344] Chr22:16888899..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
NM_031910.4(C1QTNF6):c.646G>A (p.Ala216Thr) single nucleotide variant Inborn genetic diseases [RCV003252455] Chr22:37182379 [GRCh38]
Chr22:37578419 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.276C>T (p.Ile92=) single nucleotide variant not provided [RCV000955052] Chr22:37185231 [GRCh38]
Chr22:37581271 [GRCh37]
Chr22:22q12.3		 benign
GRCh37/hg19 22q12.2-13.33(chr22:30654764-51197838)x3 copy number gain not provided [RCV001007181] Chr22:30654764..51197838 [GRCh37]
Chr22:22q12.2-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16197005-51224252)x3 copy number gain See cases [RCV001263056] Chr22:16197005..51224252 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
NC_000022.10:g.(?_37154355)_(39148633_?)del deletion Emery-Dreifuss muscular dystrophy [RCV003122557]|Infantile neuroaxonal dystrophy [RCV003122556]|Myoclonic dystonia 26 [RCV003107333] Chr22:37154355..39148633 [GRCh37]
Chr22:22q12.3-13.1		 pathogenic|uncertain significance
NC_000022.10:g.(?_35776672)_(42486826_?)dup duplication Adenylosuccinate lyase deficiency [RCV003119093] Chr22:35776672..42486826 [GRCh37]
Chr22:22q12.3-13.2		 uncertain significance
NM_031910.4(C1QTNF6):c.488T>C (p.Leu163Pro) single nucleotide variant Inborn genetic diseases [RCV003277193] Chr22:37182537 [GRCh38]
Chr22:37578577 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.409G>A (p.Ala137Thr) single nucleotide variant Inborn genetic diseases [RCV002817678] Chr22:37182616 [GRCh38]
Chr22:37578656 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.114G>T (p.Met38Ile) single nucleotide variant Inborn genetic diseases [RCV002688243] Chr22:37185393 [GRCh38]
Chr22:37581433 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.192C>A (p.Asp64Glu) single nucleotide variant Inborn genetic diseases [RCV002865208] Chr22:37185315 [GRCh38]
Chr22:37581355 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.268A>G (p.Ile90Val) single nucleotide variant Inborn genetic diseases [RCV002925961] Chr22:37185239 [GRCh38]
Chr22:37581279 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.832G>A (p.Asp278Asn) single nucleotide variant Inborn genetic diseases [RCV002737213] Chr22:37182193 [GRCh38]
Chr22:37578233 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.685A>G (p.Met229Val) single nucleotide variant Inborn genetic diseases [RCV002699055] Chr22:37182340 [GRCh38]
Chr22:37578380 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.563G>A (p.Arg188His) single nucleotide variant Inborn genetic diseases [RCV002897167] Chr22:37182462 [GRCh38]
Chr22:37578502 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.127A>G (p.Met43Val) single nucleotide variant Inborn genetic diseases [RCV003219985] Chr22:37185380 [GRCh38]
Chr22:37581420 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.757C>T (p.Arg253Cys) single nucleotide variant Inborn genetic diseases [RCV003191621] Chr22:37182268 [GRCh38]
Chr22:37578308 [GRCh37]
Chr22:22q12.3		 uncertain significance
NM_031910.4(C1QTNF6):c.338G>A (p.Arg113Lys) single nucleotide variant Inborn genetic diseases [RCV003373293] Chr22:37182687 [GRCh38]
Chr22:37578727 [GRCh37]
Chr22:22q12.3		 likely benign
NM_031910.4(C1QTNF6):c.329A>T (p.Tyr110Phe) single nucleotide variant Inborn genetic diseases [RCV003384517] Chr22:37182696 [GRCh38]
Chr22:37578736 [GRCh37]
Chr22:22q12.3		 uncertain significance
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR29B1hsa-miR-29b-3pOncomiRDBexternal_infoNANA22864815
MIR29B2hsa-miR-29b-3pOncomiRDBexternal_infoNANA22864815

Predicted Target Of
Summary Value
Count of predictions:3739
Count of miRNA genes:1037
Interacting mature miRNAs:1282
Transcripts:ENST00000255836, ENST00000337843, ENST00000397110, ENST00000434784, ENST00000467564, ENST00000470655, ENST00000493023, ENST00000497071
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH91409  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372237,576,223 - 37,576,381UniSTSGRCh37
Build 362235,906,169 - 35,906,327RGDNCBI36
Celera2221,377,265 - 21,377,424RGD
Cytogenetic Map22q13.1UniSTS
HuRef2220,541,218 - 20,541,377UniSTS
GeneMap99-GB4 RH Map22112.93UniSTS
STS-AA011279  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372237,577,765 - 37,578,041UniSTSGRCh37
Build 362235,907,711 - 35,907,987RGDNCBI36
Celera2221,378,808 - 21,379,084RGD
Cytogenetic Map22q13.1UniSTS
HuRef2220,542,761 - 20,543,037UniSTS
GeneMap99-GB4 RH Map22111.71UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map20p11.23-p11.21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p25.1-p23UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic MapXp21.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map12p13-p12UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q22UniSTS
Cytogenetic Map4p15.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p16.3UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map6q22.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map3p21-p12UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p22-p21.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q31.3UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q32-q33UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map14q23-q24.2UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map2p24-p21UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic MapXq25-q26UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map15q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map1q25.1-q25.2UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map4q32-q34UniSTS
Cytogenetic MapXq25-q26.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map20q11.22-q12UniSTS
Cytogenetic Map4q34.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q31.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map21q21.2UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map2q36.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map20p12UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map22q13.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map11p14UniSTS
Cytogenetic Map1p32.1UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3p13UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map8q23UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map4q31.3UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic MapXq13UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map16q12-q13UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map22qUniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic MapXp22.12-p22.11UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map8p22-p21.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map7q22-qterUniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 105 43 177 68 172 72 341 27 232 90 489 273 8 66 234 3
Low 2326 2728 1547 553 1701 392 3903 1898 3351 320 966 1327 164 1 1138 2447 3
Below cutoff 7 216 1 2 76 1 112 272 132 9 4 13 2 107 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001365878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_031910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_182486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF329842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK226149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM678522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM722009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ674594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU147265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU535692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU542015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU859813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB961508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR456451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KX533492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA987749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA987750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA987751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z82188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000337843   ⟹   ENSP00000338812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,180,166 - 37,188,247 (-)Ensembl
RefSeq Acc Id: ENST00000397110   ⟹   ENSP00000380299
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,180,167 - 37,188,286 (-)Ensembl
RefSeq Acc Id: ENST00000434784   ⟹   ENSP00000399243
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,182,174 - 37,188,236 (-)Ensembl
RefSeq Acc Id: ENST00000467564
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,190,553 - 37,197,748 (-)Ensembl
RefSeq Acc Id: ENST00000470655
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,180,167 - 37,198,301 (-)Ensembl
RefSeq Acc Id: ENST00000493023
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,180,171 - 37,185,948 (-)Ensembl
RefSeq Acc Id: ENST00000497071
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,190,553 - 37,199,385 (-)Ensembl
RefSeq Acc Id: NM_001365878   ⟹   NP_001352807
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,199,423 (-)NCBI
T2T-CHM13v2.02237,640,085 - 37,659,343 (-)NCBI
Sequence:
RefSeq Acc Id: NM_031910   ⟹   NP_114116
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,188,247 (-)NCBI
GRCh372237,576,206 - 37,594,341 (-)NCBI
Build 362235,906,152 - 35,914,276 (-)NCBI Archive
Celera2221,377,248 - 21,385,372 (-)RGD
HuRef2220,541,201 - 20,549,321 (-)RGD
CHM1_12237,535,430 - 37,543,555 (-)NCBI
T2T-CHM13v2.02237,640,085 - 37,648,168 (-)NCBI
Sequence:
RefSeq Acc Id: NM_182486   ⟹   NP_872292
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,188,247 (-)NCBI
GRCh372237,576,206 - 37,594,341 (-)NCBI
Build 362235,906,152 - 35,914,276 (-)NCBI Archive
Celera2221,377,248 - 21,385,372 (-)RGD
HuRef2220,541,201 - 20,549,321 (-)RGD
CHM1_12237,535,430 - 37,543,555 (-)NCBI
T2T-CHM13v2.02237,640,085 - 37,648,168 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011529857   ⟹   XP_011528159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,197,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017028569   ⟹   XP_016884058
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,188,247 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024452150   ⟹   XP_024307918
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,197,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024452153   ⟹   XP_024307921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,199,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047441111   ⟹   XP_047297067
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,197,698 (-)NCBI
RefSeq Acc Id: XM_047441112   ⟹   XP_047297068
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,199,423 (-)NCBI
RefSeq Acc Id: XM_047441113   ⟹   XP_047297069
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,197,698 (-)NCBI
RefSeq Acc Id: XM_047441114   ⟹   XP_047297070
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,180,166 - 37,199,423 (-)NCBI
RefSeq Acc Id: XM_054325056   ⟹   XP_054181031
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,648,051 (-)NCBI
RefSeq Acc Id: XM_054325057   ⟹   XP_054181032
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,659,343 (-)NCBI
RefSeq Acc Id: XM_054325058   ⟹   XP_054181033
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,658,608 (-)NCBI
RefSeq Acc Id: XM_054325059   ⟹   XP_054181034
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,658,608 (-)NCBI
RefSeq Acc Id: XM_054325060   ⟹   XP_054181035
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,659,343 (-)NCBI
RefSeq Acc Id: XM_054325061   ⟹   XP_054181036
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02237,640,085 - 37,658,617 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001352807 (Get FASTA)   NCBI Sequence Viewer  
  NP_114116 (Get FASTA)   NCBI Sequence Viewer  
  NP_872292 (Get FASTA)   NCBI Sequence Viewer  
  XP_011528159 (Get FASTA)   NCBI Sequence Viewer  
  XP_016884058 (Get FASTA)   NCBI Sequence Viewer  
  XP_024307918 (Get FASTA)   NCBI Sequence Viewer  
  XP_024307921 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297067 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297068 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297069 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297070 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181031 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181032 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181033 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181034 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181035 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181036 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH20551 (Get FASTA)   NCBI Sequence Viewer  
  AAK17966 (Get FASTA)   NCBI Sequence Viewer  
  AAQ88740 (Get FASTA)   NCBI Sequence Viewer  
  AQN67645 (Get FASTA)   NCBI Sequence Viewer  
  BAC87283 (Get FASTA)   NCBI Sequence Viewer  
  BAG36766 (Get FASTA)   NCBI Sequence Viewer  
  CAG30337 (Get FASTA)   NCBI Sequence Viewer  
  EAW60145 (Get FASTA)   NCBI Sequence Viewer  
  EAW60146 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000338812
  ENSP00000338812.2
  ENSP00000380299
  ENSP00000380299.2
  ENSP00000399243.1
GenBank Protein Q9BXI9 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_114116   ⟸   NM_031910
- Peptide Label: isoform 1 precursor
- UniProtKB: Q5H9G8 (UniProtKB/Swiss-Prot),   Q6ZRM7 (UniProtKB/Swiss-Prot),   Q9BXI9 (UniProtKB/Swiss-Prot),   A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_872292   ⟸   NM_182486
- Peptide Label: isoform 1 precursor
- UniProtKB: Q5H9G8 (UniProtKB/Swiss-Prot),   Q6ZRM7 (UniProtKB/Swiss-Prot),   Q9BXI9 (UniProtKB/Swiss-Prot),   A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011528159   ⟸   XM_011529857
- Peptide Label: isoform X3
- UniProtKB: A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016884058   ⟸   XM_017028569
- Peptide Label: isoform X1
- UniProtKB: A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024307921   ⟸   XM_024452153
- Peptide Label: isoform X1
- UniProtKB: A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024307918   ⟸   XM_024452150
- Peptide Label: isoform X1
- UniProtKB: A0A3B0ISU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001352807   ⟸   NM_001365878
- Peptide Label: isoform 2 precursor
- UniProtKB: A0A3B0ISU4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000338812   ⟸   ENST00000337843
RefSeq Acc Id: ENSP00000399243   ⟸   ENST00000434784
RefSeq Acc Id: ENSP00000380299   ⟸   ENST00000397110
RefSeq Acc Id: XP_047297070   ⟸   XM_047441114
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047297068   ⟸   XM_047441112
- Peptide Label: isoform X2
- UniProtKB: Q9BXI9 (UniProtKB/Swiss-Prot),   Q5H9G8 (UniProtKB/Swiss-Prot),   Q6ZRM7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047297069   ⟸   XM_047441113
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047297067   ⟸   XM_047441111
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054181035   ⟸   XM_054325060
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054181032   ⟸   XM_054325057
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054181036   ⟸   XM_054325061
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054181034   ⟸   XM_054325059
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054181033   ⟸   XM_054325058
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054181031   ⟸   XM_054325056
- Peptide Label: isoform X1
Protein Domains
C1q   Collagen-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9BXI9-F1-model_v2 AlphaFold Q9BXI9 1-278 view protein structure

Promoters
RGD ID:6799705
Promoter ID:HG_KWN:42656
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   Lymphoblastoid
Transcripts:UC003AQW.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362235,912,264 - 35,912,764 (-)MPROMDB
RGD ID:6799703
Promoter ID:HG_KWN:42657
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000318806,   UC003AQX.1,   UC003AQY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362235,913,816 - 35,914,316 (-)MPROMDB
RGD ID:6799721
Promoter ID:HG_KWN:42658
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid
Transcripts:OTTHUMT00000318810,   UC003AQZ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362235,923,501 - 35,925,282 (-)MPROMDB
RGD ID:13603946
Promoter ID:EPDNEW_H28157
Type:initiation region
Name:C1QTNF6_1
Description:C1q and TNF related 6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H28158  EPDNEW_H28159  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,188,247 - 37,188,307EPDNEW
RGD ID:13603948
Promoter ID:EPDNEW_H28158
Type:initiation region
Name:C1QTNF6_2
Description:C1q and TNF related 6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H28157  EPDNEW_H28159  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,199,391 - 37,199,451EPDNEW
RGD ID:13603950
Promoter ID:EPDNEW_H28159
Type:initiation region
Name:C1QTNF6_3
Description:C1q and TNF related 6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H28157  EPDNEW_H28158  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,199,984 - 37,200,044EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:14343 AgrOrtholog
COSMIC C1QTNF6 COSMIC
Ensembl Genes ENSG00000133466 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000337843 ENTREZGENE
  ENST00000337843.7 UniProtKB/Swiss-Prot
  ENST00000397110 ENTREZGENE
  ENST00000397110.6 UniProtKB/Swiss-Prot
  ENST00000434784.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000133466 GTEx
HGNC ID HGNC:14343 ENTREZGENE
Human Proteome Map C1QTNF6 Human Proteome Map
InterPro C1q_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Collagen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tumour_necrosis_fac-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:114904 UniProtKB/Swiss-Prot
NCBI Gene 114904 ENTREZGENE
OMIM 614910 OMIM
PANTHER CEREBELLIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMPLEMENT C1Q TUMOR NECROSIS FACTOR-RELATED PROTEIN 6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam C1q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Collagen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA25633 PharmGKB
PRINTS COMPLEMNTC1Q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE C1Q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART C1Q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49842 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1S5UZH7_HUMAN UniProtKB/TrEMBL
  A0A3B0ISU4 ENTREZGENE, UniProtKB/TrEMBL
  C1QT6_HUMAN UniProtKB/Swiss-Prot
  F8WC87_HUMAN UniProtKB/TrEMBL
  Q5H9G8 ENTREZGENE
  Q6ZRM7 ENTREZGENE
  Q9BXI9 ENTREZGENE
UniProt Secondary Q5H9G8 UniProtKB/Swiss-Prot
  Q6ZRM7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-07 C1QTNF6  C1q and TNF related 6    C1q and tumor necrosis factor related protein 6  Symbol and/or name change 5135510 APPROVED