SUPV3L1 (Suv3 like RNA helicase) - Rat Genome Database

Name: SUPV3L1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SUPV3L1 (Suv3 like RNA helicase) Homo sapiens

Analyze

Symbol:

SUPV3L1

Name:

Suv3 like RNA helicase

RGD ID:

1313667

HGNC Page

HGNC:11471

Description:

Enables helicase activity; nucleic acid binding activity; and protein homodimerization activity. Involved in several processes, including DNA duplex unwinding; mitochondrial RNA metabolic process; and positive regulation of mitochondrial RNA catabolic process. Located in mitochondrial nucleoid and nucleus. Part of mitochondrial degradosome.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ATP-dependent RNA helicase SUPV3L1, mitochondrial; suppressor of var1 3-like protein 1; suppressor of var1, 3-like 1; suppressor of var1, 3-like 1(SUV3); SUV3; SUV3-like helicase; SUV3-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Supv3l1 (suppressor of var1, 3-like 1 (S. cerevisiae))	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Supv3l1 (Suv3 like RNA helicase)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Supv3l1 (Suv3 like RNA helicase)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	SUPV3L1 (Suv3 like RNA helicase)	NCBI	Ortholog
Canis lupus familiaris (dog):	SUPV3L1 (Suv3 like RNA helicase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Supv3l1 (Suv3 like RNA helicase)	NCBI	Ortholog
Sus scrofa (pig):	SUPV3L1 (Suv3 like RNA helicase)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	SUPV3L1 (Suv3 like RNA helicase)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Supv3l1 (Suv3 like RNA helicase)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Supv3l1 (Suv3 like RNA helicase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Supv3l1 (suppressor of var1, 3-like 1 (S. cerevisiae))	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	supv3l1 (SUV3-like helicase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	C08F8.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SUV3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Suv3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	supv3l1.S	Alliance	DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):	supv3l1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	69,180,234 - 69,209,099 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	70,939,990 - 70,968,849 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	70,609,999 - 70,638,855 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	70,609,998 - 70,638,855	NCBI
Celera	10	64,215,826 - 64,244,691 (+)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	64,939,986 - 64,968,855 (+)	NCBI		HuRef
CHM1_1	10	71,221,740 - 71,250,602 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alopecia (EXP)

ichthyosis (EXP)

Sarcopenia (EXP)

Skin Abnormalities (EXP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-alpha-phellandrene (EXP)

(1->4)-beta-D-glucan (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (ISO)

2,6-dinitrotoluene (ISO)

3-isobutyl-1-methyl-7H-xanthine (EXP)

5-fluorouracil (EXP)

acrylamide (ISO)

all-trans-retinoic acid (EXP)

alpha-phellandrene (EXP)

atrazine (EXP,ISO)

bisphenol A (EXP,ISO)

Bisphenol B (EXP)

bisphenol F (EXP)

carbon nanotube (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (EXP)

cyclosporin A (EXP)

deguelin (EXP)

dexamethasone (EXP)

doxorubicin (EXP,ISO)

fenthion (ISO)

finasteride (ISO)

flutamide (ISO)

folic acid (ISO)

FR900359 (EXP)

gentamycin (ISO)

glyphosate (ISO)

hydrogen peroxide (ISO)

indometacin (EXP)

ivermectin (EXP)

methidathion (ISO)

paracetamol (EXP)

pentachlorophenol (ISO)

perfluorononanoic acid (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (EXP)

picoxystrobin (EXP)

pirinixic acid (ISO)

rotenone (EXP)

silicon dioxide (EXP)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA duplex unwinding (IMP)

DNA recombination (IMP)

mitochondrial mRNA catabolic process (IMP)

mitochondrial mRNA surveillance (IMP)

mitochondrial ncRNA surveillance (IMP)

mitochondrial RNA 3'-end processing (IBA,IEA,IMP)

mitochondrial RNA catabolic process (TAS)

mitochondrial RNA surveillance (IMP)

mitochondrion organization (IMP)

negative regulation of apoptotic process (IMP)

positive regulation of cell growth (IMP)

positive regulation of mitochondrial RNA catabolic process (IDA,IMP)

RNA catabolic process (IBA,IEA,IMP)

Cellular Component

mitochondrial degradosome (IBA,IDA,IEA)

mitochondrial matrix (IDA,IEA,TAS)

mitochondrial nucleoid (IDA,IEA)

mitochondrion (IDA,IEA,TAS)

nucleus (IDA,IEA)

Molecular Function

3'-5' RNA helicase activity (EXP,IDA)

ATP binding (IEA)

ATP hydrolysis activity (IEA)

DNA binding (IMP)

DNA helicase activity (IMP)

double-stranded RNA binding (IDA)

helicase activity (IEA,TAS)

hydrolase activity (IEA)

hydrolase activity, acting on acid anhydrides (IEA)

identical protein binding (IPI)

protein binding (IPI)

protein homodimerization activity (IPI)

RNA binding (HDA,TAS)

RNA helicase activity (IBA,IDA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7566098	PMID:8889548	PMID:9925937	PMID:11154739	PMID:12466530	PMID:12477932	PMID:15096047	PMID:15919122	PMID:16176273	PMID:16385451	PMID:17352692	PMID:17373700
PMID:17961633	PMID:18063578	PMID:18678873	PMID:19322201	PMID:19509288	PMID:19864255	PMID:20186120	PMID:20467437	PMID:20877624	PMID:21145461	PMID:21873635	PMID:22610502
PMID:22658674	PMID:22681889	PMID:23221631	PMID:23903356	PMID:24770417	PMID:25416956	PMID:25446650	PMID:25921289	PMID:26186194	PMID:28291845	PMID:28514442	PMID:29395067
PMID:29467282	PMID:29568061	PMID:29967381	PMID:30948266	PMID:31056398	PMID:31586073	PMID:31617661	PMID:31932471	PMID:32164594	PMID:32296183	PMID:32628020	PMID:32687490
PMID:32877691	PMID:33001583	PMID:33961781	PMID:34079125	PMID:34133714	PMID:34373451	PMID:34732716	PMID:35013218	PMID:35023579	PMID:35032548	PMID:35384245	PMID:35481630
PMID:35509820	PMID:35831314	PMID:35914814	PMID:35944360	PMID:36215168	PMID:36604567	PMID:36758106	PMID:37827155

Genomics

Comparative Map Data

SUPV3L1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	69,180,234 - 69,209,099 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	70,939,990 - 70,968,849 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	70,609,999 - 70,638,855 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	70,609,998 - 70,638,855	NCBI
Celera	10	64,215,826 - 64,244,691 (+)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	64,939,986 - 64,968,855 (+)	NCBI		HuRef
CHM1_1	10	71,221,740 - 71,250,602 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI		T2T-CHM13v2.0

Supv3l1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	62,265,000 - 62,287,294 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	62,264,988 - 62,285,517 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	62,429,221 - 62,451,515 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	62,429,209 - 62,449,738 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	61,892,126 - 61,912,441 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	61,824,735 - 61,845,050 (-)	NCBI		MGSCv36	mm8
Celera	10	63,532,543 - 63,552,858 (-)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	32.4	NCBI

Supv3l1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	30,921,248 - 30,941,779 (-)	NCBI		GRCr8
mRatBN7.2	20	30,378,542 - 30,399,076 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	30,378,550 - 30,399,054 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	31,389,464 - 31,409,939 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	30,780,364 - 30,800,843 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	31,516,952 - 31,537,595 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	32,057,530 - 32,080,170 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	32,057,454 - 32,080,088 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	33,844,945 - 33,865,381 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	29,681,431 - 29,714,796 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	29,695,230 - 29,714,461 (-)	NCBI
Celera	20	31,798,626 - 31,819,177 (-)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

Supv3l1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	21,877,666 - 21,906,362 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	21,880,778 - 21,905,540 (-)	NCBI	ChiLan1.0	ChiLan1.0

SUPV3L1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	81,326,442 - 81,355,348 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	81,331,765 - 81,360,670 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	65,647,273 - 65,676,179 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	68,180,665 - 68,209,538 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	68,180,671 - 68,209,538 (+)	Ensembl	panpan1.1		panPan2

SUPV3L1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	20,313,902 - 20,342,375 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	20,313,814 - 20,340,882 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	20,444,181 - 20,471,207 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	20,585,901 - 20,612,932 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	20,585,723 - 20,614,352 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	20,486,562 - 20,513,580 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	20,689,769 - 20,716,783 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	21,033,217 - 21,060,241 (+)	NCBI		UU_Cfam_GSD_1.0

Supv3l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	60,744,355 - 60,771,693 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	9,237,120 - 9,264,358 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	9,237,081 - 9,264,441 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SUPV3L1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	72,245,600 - 72,273,688 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	72,245,526 - 72,272,948 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	78,262,471 - 78,290,268 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SUPV3L1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	62,111,702 - 62,141,092 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	62,111,648 - 62,141,045 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	22,851,896 - 22,881,275 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Supv3l1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	3,474,298 - 3,500,170 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	3,474,235 - 3,500,215 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SUPV3L1
32 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 10q21.2-22.2(chr10:62229688-74468143)x1	copy number loss	See cases [RCV000052530]	Chr10:62229688..74468143 [GRCh38] Chr10:63989447..76227901 [GRCh37] Chr10:63659453..75897907 [NCBI36] Chr10:10q21.2-22.2	pathogenic
GRCh38/hg38 10q21.1-22.2(chr10:58436466-74415216)x1	copy number loss	See cases [RCV000052511]	Chr10:58436466..74415216 [GRCh38] Chr10:60196226..76174974 [GRCh37] Chr10:59866232..75844980 [NCBI36] Chr10:10q21.1-22.2	pathogenic
NM_003171.4(SUPV3L1):c.90C>T (p.Pro30=)	single nucleotide variant	Malignant melanoma [RCV000069012]	Chr10:69180381 [GRCh38] Chr10:70940137 [GRCh37] Chr10:70610143 [NCBI36] Chr10:10q22.1	not provided
NM_003171.4(SUPV3L1):c.1776+1925G>A	single nucleotide variant	Lung cancer [RCV000109320]	Chr10:69204968 [GRCh38] Chr10:70964724 [GRCh37] Chr10:10q22.1	uncertain significance
GRCh38/hg38 10q11.21-22.2(chr10:42685306-73715908)x3	copy number gain	See cases [RCV000134848]	Chr10:42685306..73715908 [GRCh38] Chr10:43180754..75475666 [GRCh37] Chr10:42500760..75145672 [NCBI36] Chr10:10q11.21-22.2	pathogenic
GRCh38/hg38 10q21.3-22.3(chr10:67196567-79422057)x3	copy number gain	See cases [RCV000135438]	Chr10:67196567..79422057 [GRCh38] Chr10:68956325..81181813 [GRCh37] Chr10:68626331..80851819 [NCBI36] Chr10:10q21.3-22.3	pathogenic
GRCh38/hg38 10q21.3-22.2(chr10:63402579-75296099)x1	copy number loss	See cases [RCV000136658]	Chr10:63402579..75296099 [GRCh38] Chr10:65162339..77055857 [GRCh37] Chr10:64832345..76725863 [NCBI36] Chr10:10q21.3-22.2	pathogenic\|likely benign
GRCh38/hg38 10q11.23-23.2(chr10:50729367-87147204)x3	copy number gain	See cases [RCV000138007]	Chr10:50729367..87147204 [GRCh38] Chr10:52489127..88906961 [GRCh37] Chr10:52159133..88896941 [NCBI36] Chr10:10q11.23-23.2	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3	copy number gain	See cases [RCV000448750]	Chr10:93297..135378918 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)	copy number gain	See cases [RCV000511389]	Chr10:100027..135427143 [GRCh37] Chr10:10p15.3-q26.3	pathogenic\|uncertain significance
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3	copy number gain	See cases [RCV000510861]	Chr10:100027..135427143 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
NM_003171.5(SUPV3L1):c.1094G>A (p.Arg365Gln)	single nucleotide variant	not specified [RCV004302408]	Chr10:69198442 [GRCh38] Chr10:70958198 [GRCh37] Chr10:10q22.1	uncertain significance
GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1	copy number loss	Poly (ADP-Ribose) polymerase inhibitor response [RCV000626438]	Chr10:42347406..135534747 [GRCh37] Chr10:10q11.21-26.3	drug response
GRCh37/hg19 10q21.3-23.32(chr10:69040366-93194993)x3	copy number gain	not provided [RCV000683289]	Chr10:69040366..93194993 [GRCh37] Chr10:10q21.3-23.32	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3	copy number gain	not provided [RCV000749464]	Chr10:73232..135524321 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3	copy number gain	not provided [RCV000749465]	Chr10:98087..135477883 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
NM_003171.5(SUPV3L1):c.1465G>C (p.Glu489Gln)	single nucleotide variant	not specified [RCV004322358]	Chr10:69200446 [GRCh38] Chr10:70960202 [GRCh37] Chr10:10q22.1	uncertain significance
GRCh37/hg19 10q21.3-22.3(chr10:68735254-78885714)	copy number loss	not specified [RCV002052875]	Chr10:68735254..78885714 [GRCh37] Chr10:10q21.3-22.3	pathogenic
NC_000010.10:g.(?_67680088)_(71332799_?)del	deletion	not provided [RCV001956019]	Chr10:67680088..71332799 [GRCh37] Chr10:10q21.3-22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1244A>G (p.Asn415Ser)	single nucleotide variant	not specified [RCV004320711]	Chr10:69199143 [GRCh38] Chr10:70958899 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2183C>A (p.Ala728Glu)	single nucleotide variant	not specified [RCV004215169]	Chr10:69208857 [GRCh38] Chr10:70968613 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1447G>A (p.Val483Ile)	single nucleotide variant	not specified [RCV004092657]	Chr10:69200428 [GRCh38] Chr10:70960184 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.170A>G (p.Lys57Arg)	single nucleotide variant	not specified [RCV004141623]	Chr10:69180461 [GRCh38] Chr10:70940217 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.671C>A (p.Ala224Glu)	single nucleotide variant	not specified [RCV004225433]	Chr10:69189365 [GRCh38] Chr10:70949121 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1279A>G (p.Ile427Val)	single nucleotide variant	not specified [RCV004181053]	Chr10:69199178 [GRCh38] Chr10:70958934 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.217G>A (p.Gly73Ser)	single nucleotide variant	not specified [RCV004217005]	Chr10:69180508 [GRCh38] Chr10:70940264 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1034A>G (p.Tyr345Cys)	single nucleotide variant	not specified [RCV004235625]	Chr10:69198382 [GRCh38] Chr10:70958138 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.127T>G (p.Ser43Ala)	single nucleotide variant	not specified [RCV004135287]	Chr10:69180418 [GRCh38] Chr10:70940174 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.197C>T (p.Pro66Leu)	single nucleotide variant	not specified [RCV004200018]	Chr10:69180488 [GRCh38] Chr10:70940244 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1147C>T (p.Arg383Trp)	single nucleotide variant	not specified [RCV004096773]	Chr10:69198495 [GRCh38] Chr10:70958251 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.505A>G (p.Ile169Val)	single nucleotide variant	not specified [RCV004231520]	Chr10:69187689 [GRCh38] Chr10:70947445 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2132G>A (p.Arg711His)	single nucleotide variant	not specified [RCV004237002]	Chr10:69208806 [GRCh38] Chr10:70968562 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1006A>G (p.Thr336Ala)	single nucleotide variant	not specified [RCV004202555]	Chr10:69197066 [GRCh38] Chr10:70956822 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.733A>G (p.Asn245Asp)	single nucleotide variant	not specified [RCV004124952]	Chr10:69189427 [GRCh38] Chr10:70949183 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2006G>A (p.Gly669Asp)	single nucleotide variant	not specified [RCV004178366]	Chr10:69208680 [GRCh38] Chr10:70968436 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.386A>C (p.Asn129Thr)	single nucleotide variant	not specified [RCV004163479]	Chr10:69186479 [GRCh38] Chr10:70946235 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.845C>G (p.Thr282Arg)	single nucleotide variant	not specified [RCV004101321]	Chr10:69191758 [GRCh38] Chr10:70951514 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.538C>T (p.Arg180Cys)	single nucleotide variant	not specified [RCV004196737]	Chr10:69187722 [GRCh38] Chr10:70947478 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.481T>A (p.Phe161Ile)	single nucleotide variant	not specified [RCV004258945]	Chr10:69187665 [GRCh38] Chr10:70947421 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.13C>G (p.Arg5Gly)	single nucleotide variant	not specified [RCV004279336]	Chr10:69180304 [GRCh38] Chr10:70940060 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2099C>T (p.Ser700Leu)	single nucleotide variant	not specified [RCV004287404]	Chr10:69208773 [GRCh38] Chr10:70968529 [GRCh37] Chr10:10q22.1	uncertain significance
GRCh37/hg19 10p14-q26.3(chr10:11138692-135427143)	copy number gain	Distal trisomy 10q [RCV003319593]	Chr10:11138692..135427143 [GRCh37] Chr10:10p14-q26.3	pathogenic
GRCh37/hg19 10p13-q26.3(chr10:12829206-135427143)	copy number loss	Distal 10q deletion syndrome [RCV003319583]	Chr10:12829206..135427143 [GRCh37] Chr10:10p13-q26.3	pathogenic
NM_003171.5(SUPV3L1):c.1423A>G (p.Ser475Gly)	single nucleotide variant	not specified [RCV004349335]	Chr10:69200404 [GRCh38] Chr10:70960160 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1972C>G (p.Leu658Val)	single nucleotide variant	not specified [RCV004356230]	Chr10:69208646 [GRCh38] Chr10:70968402 [GRCh37] Chr10:10q22.1	uncertain significance
GRCh37/hg19 10q11.21-24.2(chr10:42709645-100834951)x3	copy number gain	not provided [RCV003484798]	Chr10:42709645..100834951 [GRCh37] Chr10:10q11.21-24.2	pathogenic
NM_003171.5(SUPV3L1):c.99G>A (p.Gly33=)	single nucleotide variant	not provided [RCV003417457]	Chr10:69180390 [GRCh38] Chr10:70940146 [GRCh37] Chr10:10q22.1	likely benign
NM_003171.5(SUPV3L1):c.161G>C (p.Gly54Ala)	single nucleotide variant	not specified [RCV004461138]	Chr10:69180452 [GRCh38] Chr10:70940208 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.86G>A (p.Arg29His)	single nucleotide variant	not specified [RCV004461153]	Chr10:69180377 [GRCh38] Chr10:70940133 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.16G>T (p.Ala6Ser)	single nucleotide variant	not specified [RCV004461140]	Chr10:69180307 [GRCh38] Chr10:70940063 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1792A>G (p.Ser598Gly)	single nucleotide variant	not specified [RCV004461141]	Chr10:69207808 [GRCh38] Chr10:70967564 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1825C>T (p.Arg609Cys)	single nucleotide variant	not specified [RCV004461142]	Chr10:69207841 [GRCh38] Chr10:70967597 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1838A>G (p.Lys613Arg)	single nucleotide variant	not specified [RCV004461143]	Chr10:69207854 [GRCh38] Chr10:70967610 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1897G>A (p.Asp633Asn)	single nucleotide variant	not specified [RCV004461144]	Chr10:69207913 [GRCh38] Chr10:70967669 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1931G>A (p.Arg644Gln)	single nucleotide variant	not specified [RCV004461145]	Chr10:69208605 [GRCh38] Chr10:70968361 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.1952A>G (p.Asp651Gly)	single nucleotide variant	not specified [RCV004461146]	Chr10:69208626 [GRCh38] Chr10:70968382 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2015A>G (p.Asn672Ser)	single nucleotide variant	not specified [RCV004461147]	Chr10:69208689 [GRCh38] Chr10:70968445 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2255A>G (p.Glu752Gly)	single nucleotide variant	not specified [RCV004461149]	Chr10:69208929 [GRCh38] Chr10:70968685 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2355G>A (p.Ser785=)	single nucleotide variant	not specified [RCV004461150]	Chr10:69209029 [GRCh38] Chr10:70968785 [GRCh37] Chr10:10q22.1	likely benign
NM_003171.5(SUPV3L1):c.443T>C (p.Ile148Thr)	single nucleotide variant	not specified [RCV004461151]	Chr10:69186536 [GRCh38] Chr10:70946292 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.451G>A (p.Gly151Ser)	single nucleotide variant	not specified [RCV004461152]	Chr10:69186544 [GRCh38] Chr10:70946300 [GRCh37] Chr10:10q22.1	likely benign
NM_003171.5(SUPV3L1):c.976A>G (p.Ile326Val)	single nucleotide variant	not specified [RCV004461154]	Chr10:69197036 [GRCh38] Chr10:70956792 [GRCh37] Chr10:10q22.1	uncertain significance
NM_003171.5(SUPV3L1):c.2134G>A (p.Gly712Ser)	single nucleotide variant	not specified [RCV004461148]	Chr10:69208808 [GRCh38] Chr10:70968564 [GRCh37] Chr10:10q22.1	uncertain significance

miRNA Target Status

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
MIR200B	hsa-miR-200b-3p	Mirtarbase	external_info	CLASH	Functional MTI (Weak)	23622248

Predicted Target Of

	Summary Value
Count of predictions:	720
Count of miRNA genes:	529
Interacting mature miRNAs:	593
Transcripts:	ENST00000359655, ENST00000422378, ENST00000471069, ENST00000478227, ENST00000483572, ENST00000486661, ENST00000497254
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

D10S1647

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	70,944,314 - 70,944,517	UniSTS	GRCh37
Build 36	10	70,614,320 - 70,614,523	RGD	NCBI36
Celera	10	64,220,148 - 64,220,351	RGD
Cytogenetic Map	10	q22.1	UniSTS
HuRef	10	64,944,308 - 64,944,513	UniSTS
Marshfield Genetic Map	10	88.41	RGD
Marshfield Genetic Map	10	88.41	UniSTS
Genethon Genetic Map	10	91.4	UniSTS
deCODE Assembly Map	10	85.07	UniSTS
Whitehead-YAC Contig Map	10		UniSTS

WI-13637

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	70,968,695 - 70,968,795	UniSTS	GRCh37
Build 36	10	70,638,701 - 70,638,801	RGD	NCBI36
Celera	10	64,244,537 - 64,244,637	RGD
Cytogenetic Map	10	q22.1	UniSTS
HuRef	10	64,968,701 - 64,968,801	UniSTS
GeneMap99-GB4 RH Map	10	371.44	UniSTS
Whitehead-RH Map	10	440.9	UniSTS

SUPV3L1_8661

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	70,968,404 - 70,968,890	UniSTS	GRCh37
Build 36	10	70,638,410 - 70,638,896	RGD	NCBI36
Celera	10	64,244,246 - 64,244,732	RGD
HuRef	10	64,968,410 - 64,968,896	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

High

Medium

2367

2018

1575

470

1286

324

4332

2011

2988

334

1435

1580

160

1195

2769

Low

970

148

152

663

140

184

733

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001301683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001323584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001323585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001323586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001323587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001323588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_003171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_136626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_136627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF042169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK290416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK299670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL596223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC036112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM675613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DC398467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000359655 ⟹ ENSP00000352678

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,180,234 - 69,209,093 (+)	Ensembl

RefSeq Acc Id:

ENST00000422378 ⟹ ENSP00000409072

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,180,288 - 69,200,353 (+)	Ensembl

RefSeq Acc Id:

ENST00000471069

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,180,250 - 69,193,263 (+)	Ensembl

RefSeq Acc Id:

ENST00000478227

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,187,433 - 69,197,080 (+)	Ensembl

RefSeq Acc Id:

ENST00000483572

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,180,281 - 69,195,213 (+)	Ensembl

RefSeq Acc Id:

ENST00000486661

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,187,713 - 69,195,380 (+)	Ensembl

RefSeq Acc Id:

ENST00000497254

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	69,207,776 - 69,209,099 (+)	Ensembl

RefSeq Acc Id:

NM_001301683 ⟹ NP_001288612

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGACTATTCCAATTCACCTGAAAATGTAAATGTCTTTGCTGCTTCCTGTAAGAAGATA
GAATAAAGACATGGGTTTGTCAGCACTAGATTTTCTTCTGGTGGAGAATCCTTAGATACTTCAT
TGGGTCTGTGTGCCAGATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTC
AGAAACTGGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAG
AAATTATATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGC
TTCGGTGCAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTC
CTGTGTTGGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTA
CCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAG
ACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAAT
TACTGGCACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGG
TGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAG
ATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATC
CAGCCAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTG
TGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAG
GTTCGAGACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATA
ACCTTCGGCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCA
GATTGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTT
GCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAA
TTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTAT
CAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGC
AGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATC
TCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCC
AACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATT
GATATTTTTGTAGACTTTTCACAAGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTTTA
AATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCAC
AGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTAT
AGCAGGAATGAGCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCAC
CTAAGAATATTAAAGACCTCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTG
GCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAA
CTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGC
ATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAA
GAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGC
CCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACA
TGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGA
GTCTGGGACTCATCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCT
GTTCCTGTTTTTTTTTTTTTATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_001323584 ⟹ NP_001310513

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGACATTTATCTAAGATAAGGAAACGTTAAATTTTGACATCTCTCTTCTAGATGAAGT
AAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACTGGGTGCTGATTATGGA
CTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGCAGTCTCATT
CCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTGCAGCTCATGCGGATGA
TTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTTGGACTGTAAGGATGAT
CTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTACCCAGATGCTAGAGCCATGCAGC
GGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATCCAGAAATA
CTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGCACATGAGATCTTCGAA
AAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAAGAGCGTGTGACAGTTCAGC
CAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTA
TGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATCCAGCCAGAGGATGGGCCTGGACC
AGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGACC
TGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAGGTTCGAGACTATAAGAGGCTTAC
CCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCATT
GTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATTGAAATTCGGGGATTAGAAT
CAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAATGA
TCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAATTGGCATGGGACTTAATTTGAGC
ATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAAAAGGGAGAGAGAGAAC
TAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCACG
GTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATCTCAGTTTATTAAAGGAAATTTTG
AAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCCAACTGCTGAGCAGATTGAAATGT
TTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATTGATATTTTTGTAGACTTTTCACA
AGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTCTGCAGAGTTGATCCAG
CATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGC
CTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACCTT
TGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCTCATG
GATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCGATTTATGGATA
TGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGG
TGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGGGC
TTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACGCG
GCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGAGAGCTGTCCCT
TGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAAAGAG
TGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGGACTCATCCAAAAGGGA
CGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCTGTTCCTGTTTTTTTTTTTTTATT
TAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_001323585 ⟹ NP_001310514

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGACTATTCCAATTCACCTGAAAATGTAAATGTCTTTGCTGCTTCCTGTAAGAAGATA
GAATAAAGACATGGGTTTGTCAGCACTAGATTTTCTTCTGGTGGAGAATCCTTAGATACTTCAT
TGGGTCTGTGTGCCAGATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTC
AGAAACTGGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAG
AAATTATATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGC
TTCGGTGCAGGCTCTGGAGTGCAGTGGCTCAGTCTCAGCTCAGTGTGTAGCCTCAACCTCCTGG
GCTCAAGCCATCCTTCCAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAAC
AAATATTTCCTGTGTTGGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACC
TAACTGGTACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAAC
AGTGGAAAGACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCC
CTCTAAAATTACTGGCACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTT
GGTGACAGGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGT
ACAGTTGAGATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGA
TTAGAGATCCAGCCAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGT
TCATTTGTGTGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAG
GAAGTGGAGGTTCGAGACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAAT
CTTTAGATAACCTTCGGCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGT
GAGTCGGCAGATTGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGG
ACCAAACTTGCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTA
CAGATGCAATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAA
GCCCAGTATCAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAG
ATTGCTGGCAGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATC
ATGAAGATCTCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGG
TCTTCATCCAACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCC
AATCTCATTGATATTTTTGTAGACTTTTCACAAGTTGATGGGCAGTATTTTGTCTGCAATATGG
ATGATTTTAAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGT
TTTCTGCACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCC
AGGCAGTATAGCAGGAATGAGCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTT
TACTTCCACCTAAGAATATTAAAGACCTCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCT
TTACTTGTGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTC
CAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGT
CTGAGACGCATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGG
AACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAG
CCACCCAGCCCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCA
CTCCAGACATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGA
AAAAACAGAGTCTGGGACTCATCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGAC
TAGTTTTCTGTTCCTGTTTTTTTTTTTTTATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_001323586 ⟹ NP_001310515

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGAATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACT
GGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTAT
ATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTG
CAGGCTCTGGAGTGCAGTGGCTCAGTCTCAGCTCAGTGTGTAGCCTCAACCTCCTGGGCTCAAG
CCATCCTTCCAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATT
TCCTGTGTTGGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGG
TACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAA
AGACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAA
ATTACTGGCACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACA
GGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTG
AGATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGA
TCCAGCCAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTG
TGTGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGG
AGGTTCGAGACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGA
TAACCTTCGGCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGG
CAGATTGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAAC
TTGCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGC
AATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGT
ATCAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTG
GCAGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGA
TCTCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCAT
CCAACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCA
TTGATATTTTTGTAGACTTTTCACAAGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTT
TAAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGC
ACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGT
ATAGCAGGAATGAGCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCC
ACCTAAGAATATTAAAGACCTCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTG
TGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAG
AACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGAC
GCATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTA
AAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCA
GCCCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGA
CATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACA
GAGTCTGGGACTCATCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTT
CTGTTCCTGTTTTTTTTTTTTTATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_001323587 ⟹ NP_001310516

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGAATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACT
GGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTAT
ATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTG
CAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTT
GGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTACCCAGAT
GCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATC
ACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGC
ACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAAGAG
CGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCA
GTGTTACAACTCCTTGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGA
CCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAGGTTCGAGACTATAAGAGGCTT
ACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCA
TTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATTGAAATTCGGGGATTAGA
ATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAAT
GATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAATTGGCATGGGACTTAATTTGA
GCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAAAAGGGAGAGAGAGA
ACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCA
CGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATCTCAGTTTATTAAAGGAAATTT
TGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCCAACTGCTGAGCAGATTGAAAT
GTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATTGATATTTTTGTAGACTTTTCA
CAAGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTCTGCAGAGTTGATCC
AGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCA
GCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACC
TTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCTCA
TGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCGATTTATGGA
TATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGAT
GGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGG
GCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACG
CGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGAGAGCTGTCC
CTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAAAG
AGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGGACTCATCCAAAAGG
GACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCTGTTCCTGTTTTTTTTTTTTTA
TTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_001323588 ⟹ NP_001310517

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGACATTTATCTAAGATAAGGAAACGTTAAATTTTGACATCTCTCTTCTAGATGAAGT
AAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACTGGGTGCTGATTATGGA
CTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGCAGTCTCATT
CCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTGCAGCTCATGCGGATGA
TTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTTGGACTGTAAGGATGAT
CTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTACCCAGATGCTAGAGCCATGCAGC
GGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATCCAGAAATA
CTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGCACATGAGATCTTCGAA
AAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAAGAGCGTGTGACAGTTCAGC
CAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTG
ACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTT
ATGTACACAACGGGGGAGGAAGTGGAGGTTCGAGACTATAAGAGGCTTACCCCCATTTCTGTGC
TGGACCATGCACTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCATTGTCTGTTTTAGCAA
GAATGATATTTATTCTGTGAGTCGGCAGATTGAAATTCGGGGATTAGAATCAGCTGTTATATAT
GGCAGTCTCCCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCAT
GCAAAATCTTGGTTGCTACAGATGCAATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTAT
TTTTTACTCCCTTATAAAGCCCAGTATCAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACA
ACCTCTCAAGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAG
AGGTTACAACAATGAATCATGAAGATCTCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGA
TCCTATAAGGGCAGCTGGTCTTCATCCAACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTC
CCTGATGCAACACTGTCCAATCTCATTGATATTTTTGTAGACTTTTCACAAGTTGATGGGCAGT
ATTTTGTCTGCAATATGGATGATTTTAAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAG
TCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCT
TCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACCTTTGCATGGTTACGCC
GATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCTCATGGATCTTGAAGCTGT
CCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCC
AGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCA
CTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAG
CCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTA
GGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGG
TGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACA
AACTGAACACAACAAAGAAAAAACAGAGTCTGGGACTCATCCAAAAGGGACGAGAAGAAAGAAG
AAGGAACCTGATTCGGACTAGTTTTCTGTTCCTGTTTTTTTTTTTTTATTTAATTTTGCAAATA
AAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NM_003171 ⟹ NP_003162

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
GRCh37	10	70,939,993 - 70,968,854 (+)	NCBI
Build 36	10	70,609,999 - 70,638,855 (+)	NCBI Archive
HuRef	10	64,939,986 - 64,968,855 (+)	ENTREZGENE
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGAATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACT
GGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTAT
ATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTG
CAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTT
GGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTACCCAGAT
GCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATC
ACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGC
ACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAAGAG
CGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCA
GTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATCCAGCCAG
AGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAA
CCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAGGTTCGAG
ACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATAACCTTCG
GCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATTGAA
ATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTTGCTCAAG
CAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAATTGGCAT
GGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAA
AAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGCAGAGCTG
GCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATCTCAGTTT
ATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCCAACTGCT
GAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATTGATATTT
TTGTAGACTTTTCACAAGTTGATGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTC
TGCAGAGTTGATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCT
ATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGA
ATGAGCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAA
TATTAAAGACCTCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGC
TACCGATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATG
GTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCT
GTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAA
GCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATG
CAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAA
ACAGCTAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGG
ACTCATCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCTGTTCCTG
TTTTTTTTTTTTTATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NR_136626

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGAATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTCAGAAACT
GGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTAT
ATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTG
CAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTT
GGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTACCCAGAT
GCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATC
ACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGC
ACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAAGAG
CGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCA
GTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATCCAGCCAG
AGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAA
CCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAGGTTCGAG
ACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATAACCTTCG
GCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATTGAA
ATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTTGCTCAAG
CAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAATTGGCAT
GGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAA
AAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGCAGAGCTG
GCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATCTCAGTTT
ATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCCAACTGCT
GAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATTAGTTGAT
CCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAG
CAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGA
CCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCT
CATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCGATTTATG
GATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAG
ATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGAATTTGGA
GGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACA
CGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGAGAGCTGT
CCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAA
AGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGGACTCATCCAAAA
GGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCTGTTCCTGTTTTTTTTTTTT
TATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

RefSeq Acc Id:

NR_136627

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,234 - 69,209,093 (+)	NCBI
CHM1_1	10	71,221,707 - 71,250,607 (+)	NCBI
T2T-CHM13v2.0	10	70,048,571 - 70,077,444 (+)	NCBI

Sequence:

show sequence

GTCACTGTCCGCCGCCGTGTCCGCGGCTGCGCCAGACAGTGTAGAACCTGCGGCCTCGATGTCC
TTCTCCCGTGCCCTATTGTGGGCTCGGCTCCCGGCGGGGCGCCAGGCTGGCCACCGGGCAGCCA
TCTGCTCTGCCCTTCGTCCCCACTTTGGGCCCTTTCCCGGGGTTCTGGGGCAAGTTTCTGTCCT
TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCC
CTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTC
TGGACAAGACTATTCCAATTCACCTGAAAATGTAAATGTCTTTGCTGCTTCCTGTAAGAAGATA
GAATAAAGACATGGGTTTGTCAGCACTAGATTTTCTTCTGGTGGAGAATCCTTAGATACTTCAT
TGGGTCTGTGTGCCAGATGAAGTAAAGAAGGTCTTAGACAAATTTTACAAGAGGAAAGAAATTC
AGAAACTGGGTGCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAG
AAATTATATTATGCAGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGC
TTCGGTGCAGCTCATGCGGATGATTTATTCCCATTTTTCTTGAGACATGCCAAACAAATATTTC
CTGTGTTGGACTGTAAGGATGATCTACGTAAAATCAGTGACTTAAGAATACCACCTAACTGGTA
CCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAG
ACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAAT
TACTGGCACATGAGATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGG
TGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAG
ATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAATTCAAATGATTAGAGATC
CAGCCAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTG
TGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTTATGTACACAACGGGGGAGGAAGTGGAG
GTTCGAGACTATAAGAGGCTTACCCCCATTTCTGTGCTGGACCATGCACTAGAATCTTTAGATA
ACCTTCGGCCTGGGGACTGCATTGTCTGTTTTAGCAAGAATGATATTTATTCTGTGAGTCGGCA
GATTGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTCCCACCTGGGACCAAACTT
GCTCAAGCAAAAAAGTTTAATGATCCCAATGACCCATGCAAAATCTTGGTTGCTACAGATGCAA
TTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTAT
CAATGAAAAGGGAGAGAGAGAACTAGAACCAATCACAACCTCTCAAGCCCTGCAGATTGCTGGC
AGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATC
TCAGTTTATTAAAGGAAATTTTGAAGAGGCCTGTGGATCCTATAAGGGCAGCTGGTCTTCATCC
AACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATGCAACACTGTCCAATCTCATT
AGTTGATCCAGCATATTCCACTAAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAA
CAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAG
CCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTA
AAGACCTCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTACTTGTGGCTAAGCTACCG
ATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATT
ATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGA
ATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAG
AAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGA
GAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGC
TAGAAAAAGAGTGGATGACACAACAAACTGAACACAACAAAGAAAAAACAGAGTCTGGGACTCA
TCCAAAAGGGACGAGAAGAAAGAAGAAGGAACCTGATTCGGACTAGTTTTCTGTTCCTGTTTTT
TTTTTTTTATTTAATTTTGCAAATAAAAATTTATTTTGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001288612	(Get FASTA)	NCBI Sequence Viewer
	NP_001310513	(Get FASTA)	NCBI Sequence Viewer
	NP_001310514	(Get FASTA)	NCBI Sequence Viewer
	NP_001310515	(Get FASTA)	NCBI Sequence Viewer
	NP_001310516	(Get FASTA)	NCBI Sequence Viewer
	NP_001310517	(Get FASTA)	NCBI Sequence Viewer
	NP_003162	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB97370	(Get FASTA)	NCBI Sequence Viewer
	AAH36112	(Get FASTA)	NCBI Sequence Viewer
	BAF83105	(Get FASTA)	NCBI Sequence Viewer
	BAH13097	(Get FASTA)	NCBI Sequence Viewer
	EAW54314	(Get FASTA)	NCBI Sequence Viewer
	EAW54315	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000352678
	ENSP00000352678.4
	ENSP00000409072.1
GenBank Protein	Q8IYB8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_003162 ⟸ NM_003171
- Peptide Label:	isoform 1
- UniProtKB:	A8K301 (UniProtKB/Swiss-Prot), O43630 (UniProtKB/Swiss-Prot), Q8IYB8 (UniProtKB/Swiss-Prot), B7Z611 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPNTSLF VPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDARLFHQAFISFR NYIMQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDLRIPPNWY PDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTG EERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLC GEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQ IEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSI NEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHP TAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCT APINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLW LSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLK SQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTE SGTHPKGTRRKKKEPDSD hide sequence

RefSeq Acc Id:	NP_001288612 ⟸ NM_001301683
- Peptide Label:	isoform 2
- UniProtKB:	B7Z611 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDLRIPPNWYPDA RAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEER VTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEP AAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEI RGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEK GERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAE QIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPI NKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSY RFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQA RRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGT HPKGTRRKKKEPDSD hide sequence

RefSeq Acc Id:	NP_001310514 ⟸ NM_001323585
- Peptide Label:	isoform 3
- UniProtKB:	B7Z611 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIFASVQALECSGSVSAQCVASTSWAQAILPAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDL RIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGV PCDLVTGEERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLC AEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKND IYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFY SLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPI RAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLR VRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHD VLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQS RLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTE HNKEKTESGTHPKGTRRKKKEPDSD hide sequence

RefSeq Acc Id:	NP_001310513 ⟸ NM_001323584
- Peptide Label:	isoform 2
- UniProtKB:	B7Z611 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDLRIPPNWYPDA RAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEER VTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEP AAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEI RGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEK GERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAE QIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPI NKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSY RFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQA RRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGT HPKGTRRKKKEPDSD hide sequence

RefSeq Acc Id:

NP_001310517 ⟸ NM_001323588

- Peptide Label:

isoform 4

- Sequence:

show sequence

MELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLESA
VIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELE
PITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFA
YHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPF
VCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFMDMF
PDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQARRTRGT
KALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTR
RKKKEPDSD

hide sequence

RefSeq Acc Id:	NP_001310515 ⟸ NM_001323586
- Peptide Label:	isoform 3
- UniProtKB:	B7Z611 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIFASVQALECSGSVSAQCVASTSWAQAILPAHADDLFPFFLRHAKQIFPVLDCKDDLRKISDL RIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGV PCDLVTGEERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLC AEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKND IYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFY SLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPI RAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLR VRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHD VLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQS RLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTE HNKEKTESGTHPKGTRRKKKEPDSD hide sequence

RefSeq Acc Id:

NP_001310516 ⟸ NM_001323587

- Peptide Label:

isoform 4

- Sequence:

show sequence

MELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLESA
VIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELE
PITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFA
YHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPF
VCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFMDMF
PDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQARRTRGT
KALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTR
RKKKEPDSD

hide sequence

RefSeq Acc Id:

ENSP00000352678 ⟸ ENST00000359655

RefSeq Acc Id:

ENSP00000409072 ⟸ ENST00000422378

Protein Domains

Helicase ATP-binding Helicase C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8IYB8-F1-model_v2	AlphaFold	Q8IYB8	1-786	view protein structure

Promoters

RGD ID:

7217727

Promoter ID:

EPDNEW_H14609

Type:

initiation region

Name:

SUPV3L1_1

Description:

Suv3 like RNA helicase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	69,180,267 - 69,180,327	EPDNEW

RGD ID:

6788284

Promoter ID:

HG_KWN:9851

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

ENST00000395093, OTTHUMT00000048396, OTTHUMT00000048397, OTTHUMT00000048398, OTTHUMT00000048400

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	10	70,609,556 - 70,610,297 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:11471	AgrOrtholog
COSMIC	SUPV3L1	COSMIC
Ensembl Genes	ENSG00000156502	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000359655	ENTREZGENE
	ENST00000359655.9	UniProtKB/Swiss-Prot
	ENST00000422378.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1740.140	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	1.20.272.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	1.20.58.1080	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000156502	GTEx
HGNC ID	HGNC:11471	ENTREZGENE
Human Proteome Map	SUPV3L1	Human Proteome Map
InterPro	Helicase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUV3_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Suv3_C_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Suv3_DEXQc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Suv3_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:6832	UniProtKB/Swiss-Prot
NCBI Gene	6832	ENTREZGENE
OMIM	605122	OMIM
PANTHER	ATP-DEPENDENT RNA AND DNA HELICASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Helicase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUV3_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Suv3_C_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Suv3_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA36257	PharmGKB
PROSITE	HELICASE_CTER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	HELICc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A8K301	ENTREZGENE
	B1AR60_HUMAN	UniProtKB/TrEMBL
	B7Z611	ENTREZGENE, UniProtKB/TrEMBL
	O43630	ENTREZGENE
	Q8IYB8	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A8K301	UniProtKB/Swiss-Prot
	O43630	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-12	SUPV3L1	Suv3 like RNA helicase		SUV3-like helicase	Symbol and/or name change	5135510	APPROVED
2015-09-29	SUPV3L1	SUV3-like helicase		suppressor of var1, 3-like 1 (S. cerevisiae)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD