KCTD15 (potassium channel tetramerization domain containing 15) - Rat Genome Database

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Gene: KCTD15 (potassium channel tetramerization domain containing 15) Homo sapiens
Analyze
Symbol: KCTD15
Name: potassium channel tetramerization domain containing 15
RGD ID: 1313572
HGNC Page HGNC:23297
Description: Enables identical protein binding activity. Predicted to be involved in protein homooligomerization. Predicted to be located in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BTB/POZ domain-containing protein KCTD15; MGC25497; MGC2628; potassium channel tetramerisation domain containing 15; potassium channel tetramerization domain-containing protein 15
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381933,794,040 - 33,815,761 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1933,795,933 - 33,815,763 (+)EnsemblGRCh38hg38GRCh38
GRCh371934,287,775 - 34,306,666 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361938,979,607 - 38,996,988 (+)NCBINCBI36Build 36hg18NCBI36
Build 341938,979,606 - 38,996,984NCBI
Celera1930,981,389 - 31,000,301 (+)NCBICelera
Cytogenetic Map19q13.11NCBI
HuRef1930,786,796 - 30,805,705 (+)NCBIHuRef
CHM1_11934,289,029 - 34,307,934 (+)NCBICHM1_1
T2T-CHM13v2.01936,314,814 - 36,336,529 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (EXP)
1-nitropyrene  (EXP)
17alpha-ethynylestradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP)
Aflatoxin B2 alpha  (EXP)
all-trans-retinoic acid  (EXP)
alpha-Zearalanol  (ISO)
antirheumatic drug  (EXP)
aristolochic acid A  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
atrazine  (EXP)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
bromobenzene  (ISO)
butanal  (EXP)
carbon nanotube  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chrysene  (ISO)
cisplatin  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (EXP)
diazinon  (EXP)
dicrotophos  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
entinostat  (EXP)
enzyme inhibitor  (EXP)
ethyl methanesulfonate  (EXP)
folic acid  (ISO)
formaldehyde  (EXP)
FR900359  (EXP)
fulvestrant  (EXP)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
L-methionine  (ISO)
methoxychlor  (ISO)
methyl methanesulfonate  (EXP)
N,N-diethyl-m-toluamide  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (EXP)
O-methyleugenol  (EXP)
oxaliplatin  (ISO)
paracetamol  (ISO)
PCB138  (ISO)
pentachlorophenol  (ISO)
pentanal  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (EXP)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
potassium chromate  (EXP)
propanal  (EXP)
propionic acid  (EXP)
SB 431542  (EXP)
silicon dioxide  (EXP)
sodium dichromate  (ISO)
sunitinib  (EXP)
temozolomide  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
topotecan  (ISO)
trichostatin A  (EXP)
tunicamycin  (EXP,ISO)
urethane  (EXP)
valproic acid  (EXP,ISO)
vorinostat  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8125298   PMID:14702039   PMID:15146197   PMID:15342556   PMID:15345747   PMID:15489334   PMID:16169070   PMID:17207965   PMID:19079260   PMID:19079261   PMID:19164386   PMID:19692490  
PMID:19746409   PMID:19812171   PMID:19851340   PMID:19910641   PMID:19910938   PMID:20215397   PMID:20386550   PMID:20520848   PMID:20571754   PMID:20712903   PMID:20724581   PMID:20725061  
PMID:20811636   PMID:20816152   PMID:20816195   PMID:20935630   PMID:23121087   PMID:23251661   PMID:23275563   PMID:23377640   PMID:23382213   PMID:24086424   PMID:25416956   PMID:25637721  
PMID:26186194   PMID:26972000   PMID:27152988   PMID:27716508   PMID:28514442   PMID:28948079   PMID:29665387   PMID:30404837   PMID:31091453   PMID:31391242   PMID:31685809   PMID:32296183  
PMID:32807901   PMID:32891193   PMID:33545068   PMID:33961781   PMID:34521919   PMID:34732716   PMID:35140242   PMID:35748872   PMID:38113115   PMID:38296633  


Genomics

Comparative Map Data
KCTD15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381933,794,040 - 33,815,761 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1933,795,933 - 33,815,763 (+)EnsemblGRCh38hg38GRCh38
GRCh371934,287,775 - 34,306,666 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361938,979,607 - 38,996,988 (+)NCBINCBI36Build 36hg18NCBI36
Build 341938,979,606 - 38,996,984NCBI
Celera1930,981,389 - 31,000,301 (+)NCBICelera
Cytogenetic Map19q13.11NCBI
HuRef1930,786,796 - 30,805,705 (+)NCBIHuRef
CHM1_11934,289,029 - 34,307,934 (+)NCBICHM1_1
T2T-CHM13v2.01936,314,814 - 36,336,529 (+)NCBIT2T-CHM13v2.0
Kctd15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39734,336,424 - 34,354,934 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl734,338,439 - 34,356,157 (-)EnsemblGRCm39 Ensembl
GRCm38734,636,999 - 34,655,509 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl734,639,014 - 34,656,732 (-)EnsemblGRCm38mm10GRCm38
MGSCv37735,424,034 - 35,437,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36734,347,775 - 34,361,601 (-)NCBIMGSCv36mm8
Celera729,774,494 - 29,788,312 (-)NCBICelera
Cytogenetic Map7B1- B2NCBI
cM Map720.41NCBI
Kctd15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8196,395,794 - 96,411,502 (-)NCBIGRCr8
mRatBN7.2187,258,658 - 87,271,979 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl187,258,658 - 87,273,497 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx192,662,187 - 92,675,501 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01101,128,171 - 101,141,482 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0194,420,478 - 94,433,788 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0190,506,697 - 90,522,217 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl190,506,697 - 90,520,344 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0191,645,833 - 91,661,530 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4187,117,385 - 87,130,690 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera181,623,383 - 81,636,586 (-)NCBICelera
Cytogenetic Map1q21NCBI
Kctd15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554683,516,688 - 3,532,554 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554683,517,470 - 3,531,074 (+)NCBIChiLan1.0ChiLan1.0
KCTD15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22039,784,131 - 39,803,158 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11941,784,261 - 41,803,291 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01930,734,721 - 30,753,756 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11939,474,637 - 39,492,760 (+)NCBIpanpan1.1PanPan1.1panPan2
KCTD15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11118,421,710 - 118,435,121 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1118,422,444 - 118,434,699 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1117,819,620 - 117,834,461 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01119,017,008 - 119,031,923 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1119,019,420 - 119,031,947 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11118,578,232 - 118,593,107 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01118,204,219 - 118,219,062 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01119,262,973 - 119,277,873 (-)NCBIUU_Cfam_GSD_1.0
Kctd15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093499,548,346 - 9,563,774 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365702,080,547 - 2,096,929 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365702,080,549 - 2,096,929 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCTD15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl643,529,806 - 43,544,186 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1643,528,677 - 43,545,834 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KCTD15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1628,839,038 - 28,857,506 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl628,840,526 - 28,858,037 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660736,587,720 - 6,606,703 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kctd15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247949,358,497 - 9,374,808 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247949,358,631 - 9,374,743 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KCTD15
15 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19p13.11-q13.11(chr19:17176767-34924150)x3 copy number gain See cases [RCV000050635] Chr19:17176767..34924150 [GRCh38]
Chr19:17287576..35415054 [GRCh37]
Chr19:17148576..40106894 [NCBI36]
Chr19:19p13.11-q13.11
pathogenic
NM_001129994.1(KCTD15):c.243-1866G>A single nucleotide variant Lung cancer [RCV000101236] Chr19:33804997 [GRCh38]
Chr19:34295902 [GRCh37]
Chr19:19q13.11
uncertain significance
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31
pathogenic
GRCh38/hg38 19q12-13.13(chr19:29661858-38114723)x1 copy number loss See cases [RCV000135879] Chr19:29661858..38114723 [GRCh38]
Chr19:30152765..38605363 [GRCh37]
Chr19:34844605..43297203 [NCBI36]
Chr19:19q12-13.13
pathogenic
GRCh38/hg38 19q12-13.13(chr19:29671324-37902990)x1 copy number loss See cases [RCV000136794] Chr19:29671324..37902990 [GRCh38]
Chr19:30162231..38393630 [GRCh37]
Chr19:34854071..43085470 [NCBI36]
Chr19:19q12-13.13
pathogenic
GRCh38/hg38 19q12-13.12(chr19:31367353-35417098)x1 copy number loss See cases [RCV000141865] Chr19:31367353..35417098 [GRCh38]
Chr19:31858259..35908000 [GRCh37]
Chr19:36550099..40599840 [NCBI36]
Chr19:19q12-13.12
pathogenic
GRCh38/hg38 19q13.11(chr19:33738413-33998042)x1 copy number loss See cases [RCV000142711] Chr19:33738413..33998042 [GRCh38]
Chr19:34229318..34488947 [GRCh37]
Chr19:38921158..39180787 [NCBI36]
Chr19:19q13.11
uncertain significance
GRCh38/hg38 19q11-13.11(chr19:27780238-34783942)x3 copy number gain See cases [RCV000143705] Chr19:27780238..34783942 [GRCh38]
Chr19:28271146..35274846 [GRCh37]
Chr19:32962986..39966686 [NCBI36]
Chr19:19q11-13.11
uncertain significance
GRCh37/hg19 19q12-13.12(chr19:30735448-36120396)x3 copy number gain See cases [RCV000448231] Chr19:30735448..36120396 [GRCh37]
Chr19:19q12-13.12
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19q13.11(chr19:33762256-34353184)x1 copy number loss See cases [RCV000512303] Chr19:33762256..34353184 [GRCh37]
Chr19:19q13.11
likely benign
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19q11-13.33(chr19:28271106-49213832)x3 copy number gain not provided [RCV000845733] Chr19:28271106..49213832 [GRCh37]
Chr19:19q11-13.33
pathogenic
NC_000019.9:g.(?_33167170)_(36643309_?)dup duplication Hereditary spastic paraplegia 75 [RCV003107659] Chr19:33167170..36643309 [GRCh37]
Chr19:19q13.11-13.12
uncertain significance
GRCh37/hg19 19p13.11-q13.2(chr19:19546923-41313229)x3 copy number gain Specific learning disability [RCV001801194] Chr19:19546923..41313229 [GRCh37]
Chr19:19p13.11-q13.2
pathogenic
GRCh37/hg19 19q13.11(chr19:32827535-35263640) copy number gain not specified [RCV002052679] Chr19:32827535..35263640 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.847G>C (p.Asp283His) single nucleotide variant not specified [RCV004110691] Chr19:33812943 [GRCh38]
Chr19:34303848 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.101G>A (p.Arg34Gln) single nucleotide variant not specified [RCV004138894] Chr19:33801201 [GRCh38]
Chr19:34292106 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.44C>T (p.Thr15Ile) single nucleotide variant not specified [RCV004139603] Chr19:33800498 [GRCh38]
Chr19:34291403 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.396T>G (p.Ser132Arg) single nucleotide variant not specified [RCV004160693] Chr19:33811255 [GRCh38]
Chr19:34302160 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.748G>A (p.Gly250Ser) single nucleotide variant not specified [RCV004146033] Chr19:33812844 [GRCh38]
Chr19:34303749 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.434C>T (p.Pro145Leu) single nucleotide variant not specified [RCV004229466] Chr19:33811293 [GRCh38]
Chr19:34302198 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.803C>T (p.Pro268Leu) single nucleotide variant not specified [RCV004150182] Chr19:33812899 [GRCh38]
Chr19:34303804 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.528C>G (p.Asp176Glu) single nucleotide variant not specified [RCV004099376] Chr19:33811387 [GRCh38]
Chr19:34302292 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.844C>G (p.Leu282Val) single nucleotide variant not specified [RCV004165307] Chr19:33812940 [GRCh38]
Chr19:34303845 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.478C>T (p.Arg160Trp) single nucleotide variant not specified [RCV004241964] Chr19:33811337 [GRCh38]
Chr19:34302242 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.727G>T (p.Val243Leu) single nucleotide variant not specified [RCV004271027] Chr19:33812823 [GRCh38]
Chr19:34303728 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.337G>A (p.Val113Ile) single nucleotide variant not specified [RCV004248091] Chr19:33806957 [GRCh38]
Chr19:34297862 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.680T>C (p.Leu227Pro) single nucleotide variant not specified [RCV004362106] Chr19:33811539 [GRCh38]
Chr19:34302444 [GRCh37]
Chr19:19q13.11
uncertain significance
NM_001129994.2(KCTD15):c.649A>G (p.Ile217Val) single nucleotide variant not specified [RCV004344898] Chr19:33811508 [GRCh38]
Chr19:34302413 [GRCh37]
Chr19:19q13.11
uncertain significance
GRCh37/hg19 19q11-13.2(chr19:28271146-41508851)x3 copy number gain not specified [RCV003986115] Chr19:28271146..41508851 [GRCh37]
Chr19:19q11-13.2
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6473
Count of miRNA genes:1144
Interacting mature miRNAs:1535
Transcripts:ENST00000284006, ENST00000430256, ENST00000587559, ENST00000587658, ENST00000588637, ENST00000588881, ENST00000589786, ENST00000590385, ENST00000590771, ENST00000590906, ENST00000592210, ENST00000592363
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH78686  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,304,038 - 34,304,215UniSTSGRCh37
Build 361938,995,878 - 38,996,055RGDNCBI36
Celera1930,997,675 - 30,997,852RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,803,079 - 30,803,256UniSTS
GeneMap99-GB4 RH Map19238.3UniSTS
NCBI RH Map19379.9UniSTS
RH93829  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,305,773 - 34,305,926UniSTSGRCh37
Build 361938,997,613 - 38,997,766RGDNCBI36
Celera1930,999,411 - 30,999,564RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,804,815 - 30,804,968UniSTS
GeneMap99-GB4 RH Map19203.96UniSTS
RH98215  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,302,183 - 34,302,366UniSTSGRCh37
Build 361938,994,023 - 38,994,206RGDNCBI36
Celera1930,995,820 - 30,996,003RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,801,224 - 30,801,407UniSTS
GeneMap99-GB4 RH Map19204.98UniSTS
WI-13386  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,305,009 - 34,305,139UniSTSGRCh37
Build 361938,996,849 - 38,996,979RGDNCBI36
Celera1930,998,647 - 30,998,777RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,804,051 - 30,804,181UniSTS
GeneMap99-GB4 RH Map19205.56UniSTS
Whitehead-RH Map19285.0UniSTS
STS-Z40869  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,305,066 - 34,305,135UniSTSGRCh37
Build 361938,996,906 - 38,996,975RGDNCBI36
Celera1930,998,704 - 30,998,773RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,804,108 - 30,804,177UniSTS
GeneMap99-GB4 RH Map19236.79UniSTS
NCBI RH Map19331.5UniSTS
RH35892  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,306,440 - 34,306,571UniSTSGRCh37
Build 361938,998,280 - 38,998,411RGDNCBI36
Celera1931,000,078 - 31,000,209RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,805,482 - 30,805,613UniSTS
GeneMap99-GB4 RH Map19203.96UniSTS
NCBI RH Map19334.6UniSTS
SHGC-32254  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371934,305,968 - 34,306,092UniSTSGRCh37
Build 361938,997,808 - 38,997,932RGDNCBI36
Celera1930,999,606 - 30,999,730RGD
Cytogenetic Map19q13.11UniSTS
HuRef1930,805,010 - 30,805,134UniSTS
Whitehead-RH Map19285.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1883 1429 841 105 399 49 3225 951 2225 184 1296 1463 66 893 1884 1
Low 531 1438 869 510 1043 406 1125 1234 1478 224 145 116 104 311 899 3
Below cutoff 13 115 7 5 334 5 5 8 4 5 4 14 5

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001129994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001129995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011527296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011527297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011527298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047439402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054322083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_935857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC008556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC253569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI741557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK225793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX883448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP339379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN301512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX752088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000284006   ⟹   ENSP00000284006
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,862 - 33,815,763 (+)Ensembl
RefSeq Acc Id: ENST00000430256   ⟹   ENSP00000394390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,798,386 - 33,814,243 (+)Ensembl
RefSeq Acc Id: ENST00000587559   ⟹   ENSP00000466804
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,416 - 33,807,006 (+)Ensembl
RefSeq Acc Id: ENST00000587658   ⟹   ENSP00000466357
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,795,933 - 33,806,958 (+)Ensembl
RefSeq Acc Id: ENST00000588637   ⟹   ENSP00000467955
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,454 - 33,806,868 (+)Ensembl
RefSeq Acc Id: ENST00000588881   ⟹   ENSP00000464812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,902 - 33,812,970 (+)Ensembl
RefSeq Acc Id: ENST00000589786   ⟹   ENSP00000467612
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,862 - 33,813,472 (+)Ensembl
RefSeq Acc Id: ENST00000590385   ⟹   ENSP00000477220
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,806,924 - 33,811,828 (+)Ensembl
RefSeq Acc Id: ENST00000590771   ⟹   ENSP00000464722
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,846 - 33,801,285 (+)Ensembl
RefSeq Acc Id: ENST00000590906   ⟹   ENSP00000467353
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,798,337 - 33,801,332 (+)Ensembl
RefSeq Acc Id: ENST00000592210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,798,699 - 33,801,748 (+)Ensembl
RefSeq Acc Id: ENST00000592363
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,813,811 - 33,814,176 (+)Ensembl
RefSeq Acc Id: ENST00000683859   ⟹   ENSP00000508199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1933,796,870 - 33,815,761 (+)Ensembl
RefSeq Acc Id: NM_001129994   ⟹   NP_001123466
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
GRCh371934,287,751 - 34,306,666 (+)RGD
Celera1930,981,389 - 31,000,301 (+)RGD
HuRef1930,786,796 - 30,805,705 (+)RGD
CHM1_11934,289,029 - 34,307,934 (+)NCBI
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001129995   ⟹   NP_001123467
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
GRCh371934,287,751 - 34,306,666 (+)RGD
Celera1930,981,389 - 31,000,301 (+)RGD
HuRef1930,786,796 - 30,805,705 (+)RGD
CHM1_11934,289,029 - 34,307,934 (+)NCBI
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
Sequence:
RefSeq Acc Id: NM_024076   ⟹   NP_076981
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
GRCh371934,287,751 - 34,306,666 (+)RGD
Build 361938,979,607 - 38,996,988 (+)NCBI Archive
Celera1930,981,389 - 31,000,301 (+)RGD
HuRef1930,786,796 - 30,805,705 (+)RGD
CHM1_11934,289,029 - 34,307,934 (+)NCBI
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011527296   ⟹   XP_011525598
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,798,113 - 33,815,761 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011527297   ⟹   XP_011525599
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,798,113 - 33,815,761 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011527298   ⟹   XP_011525600
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017027283   ⟹   XP_016882772
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017027284   ⟹   XP_016882773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,794,040 - 33,799,715 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047439392   ⟹   XP_047295348
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,806,859 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439393   ⟹   XP_047295349
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,797,118 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439394   ⟹   XP_047295350
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439395   ⟹   XP_047295351
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,003 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439396   ⟹   XP_047295352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,795,892 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439397   ⟹   XP_047295353
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,797,118 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439398   ⟹   XP_047295354
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,798,113 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439399   ⟹   XP_047295355
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,232 - 33,815,761 (+)NCBI
RefSeq Acc Id: XM_047439400   ⟹   XP_047295356
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,797,117 - 33,812,038 (+)NCBI
RefSeq Acc Id: XM_047439401   ⟹   XP_047295357
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,232 - 33,812,038 (+)NCBI
RefSeq Acc Id: XM_047439402   ⟹   XP_047295358
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,870 - 33,812,038 (+)NCBI
RefSeq Acc Id: XM_054322068   ⟹   XP_054178043
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,327,630 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322069   ⟹   XP_054178044
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,892 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322070   ⟹   XP_054178045
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322071   ⟹   XP_054178046
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,316,777 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322072   ⟹   XP_054178047
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322073   ⟹   XP_054178048
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,316,666 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322074   ⟹   XP_054178049
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,892 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322075   ⟹   XP_054178050
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,318,883 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322076   ⟹   XP_054178051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,318,883 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322077   ⟹   XP_054178052
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322078   ⟹   XP_054178053
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,644 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322079   ⟹   XP_054178054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,318,883 - 36,336,529 (+)NCBI
RefSeq Acc Id: XM_054322080   ⟹   XP_054178055
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,891 - 36,332,809 (+)NCBI
RefSeq Acc Id: XM_054322081   ⟹   XP_054178056
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,158 - 36,332,809 (+)NCBI
RefSeq Acc Id: XM_054322082   ⟹   XP_054178057
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,317,644 - 36,332,809 (+)NCBI
RefSeq Acc Id: XM_054322083   ⟹   XP_054178058
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01936,314,814 - 36,320,485 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001123466 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123467 (Get FASTA)   NCBI Sequence Viewer  
  NP_076981 (Get FASTA)   NCBI Sequence Viewer  
  XP_011525598 (Get FASTA)   NCBI Sequence Viewer  
  XP_011525599 (Get FASTA)   NCBI Sequence Viewer  
  XP_011525600 (Get FASTA)   NCBI Sequence Viewer  
  XP_016882772 (Get FASTA)   NCBI Sequence Viewer  
  XP_016882773 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295348 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295349 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295350 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295351 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295352 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295353 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295354 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295355 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295356 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295357 (Get FASTA)   NCBI Sequence Viewer  
  XP_047295358 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178043 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178044 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178045 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178046 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178047 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178048 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178049 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178050 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178051 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178052 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178053 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178054 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178055 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178056 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178057 (Get FASTA)   NCBI Sequence Viewer  
  XP_054178058 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH01185 (Get FASTA)   NCBI Sequence Viewer  
  AAH09335 (Get FASTA)   NCBI Sequence Viewer  
  BAB55443 (Get FASTA)   NCBI Sequence Viewer  
  BAF84154 (Get FASTA)   NCBI Sequence Viewer  
  BAG53375 (Get FASTA)   NCBI Sequence Viewer  
  BAG57750 (Get FASTA)   NCBI Sequence Viewer  
  CAE91978 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000284006
  ENSP00000284006.4
  ENSP00000394390.1
  ENSP00000464722.1
  ENSP00000464812
  ENSP00000464812.1
  ENSP00000466357.1
  ENSP00000466804.1
  ENSP00000467353.1
  ENSP00000467612
  ENSP00000467612.1
  ENSP00000467955.1
  ENSP00000477220.1
  ENSP00000508199
  ENSP00000508199.1
GenBank Protein Q96SI1 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001123467   ⟸   NM_001129995
- Peptide Label: isoform 2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_076981   ⟸   NM_024076
- Peptide Label: isoform 1
- UniProtKB: B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123466   ⟸   NM_001129994
- Peptide Label: isoform 2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011525600   ⟸   XM_011527298
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011525599   ⟸   XM_011527297
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011525598   ⟸   XM_011527296
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016882773   ⟸   XM_017027284
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_016882772   ⟸   XM_017027283
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot),   B4DGD9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000466804   ⟸   ENST00000587559
RefSeq Acc Id: ENSP00000284006   ⟸   ENST00000284006
RefSeq Acc Id: ENSP00000466357   ⟸   ENST00000587658
RefSeq Acc Id: ENSP00000464812   ⟸   ENST00000588881
RefSeq Acc Id: ENSP00000467955   ⟸   ENST00000588637
RefSeq Acc Id: ENSP00000467612   ⟸   ENST00000589786
RefSeq Acc Id: ENSP00000394390   ⟸   ENST00000430256
RefSeq Acc Id: ENSP00000477220   ⟸   ENST00000590385
RefSeq Acc Id: ENSP00000464722   ⟸   ENST00000590771
RefSeq Acc Id: ENSP00000467353   ⟸   ENST00000590906
RefSeq Acc Id: ENSP00000508199   ⟸   ENST00000683859
RefSeq Acc Id: XP_047295352   ⟸   XM_047439396
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295351   ⟸   XM_047439395
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295355   ⟸   XM_047439399
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295357   ⟸   XM_047439401
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047295350   ⟸   XM_047439394
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295358   ⟸   XM_047439402
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047295356   ⟸   XM_047439400
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047295353   ⟸   XM_047439397
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295349   ⟸   XM_047439393
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295354   ⟸   XM_047439398
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047295348   ⟸   XM_047439392
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054178058   ⟸   XM_054322083
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054178048   ⟸   XM_054322073
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178046   ⟸   XM_054322071
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178056   ⟸   XM_054322081
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054178047   ⟸   XM_054322072
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178045   ⟸   XM_054322070
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178052   ⟸   XM_054322077
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178053   ⟸   XM_054322078
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178057   ⟸   XM_054322082
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054178055   ⟸   XM_054322080
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054178049   ⟸   XM_054322074
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178044   ⟸   XM_054322069
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178050   ⟸   XM_054322075
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178051   ⟸   XM_054322076
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178054   ⟸   XM_054322079
- Peptide Label: isoform X2
- UniProtKB: Q9BVI6 (UniProtKB/Swiss-Prot),   Q96SI1 (UniProtKB/Swiss-Prot),   A8K600 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054178043   ⟸   XM_054322068
- Peptide Label: isoform X1
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96SI1-F1-model_v2 AlphaFold Q96SI1 1-283 view protein structure

Promoters
RGD ID:7239425
Promoter ID:EPDNEW_H25458
Type:initiation region
Name:KCTD15_1
Description:potassium channel tetramerization domain containing 15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381933,796,838 - 33,796,898EPDNEW
RGD ID:6795693
Promoter ID:HG_KWN:29558
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   Jurkat,   Lymphoblastoid,   NB4
Transcripts:NM_001129994,   NM_001129995,   NM_024076
Position:
Human AssemblyChrPosition (strand)Source
Build 361938,978,626 - 38,980,007 (+)MPROMDB
RGD ID:6795695
Promoter ID:HG_KWN:29559
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   NB4
Transcripts:UC002NUX.2
Position:
Human AssemblyChrPosition (strand)Source
Build 361938,980,149 - 38,980,649 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:23297 AgrOrtholog
COSMIC KCTD15 COSMIC
Ensembl Genes ENSG00000153885 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000284006 ENTREZGENE
  ENST00000284006.10 UniProtKB/Swiss-Prot
  ENST00000430256.3 UniProtKB/Swiss-Prot
  ENST00000587559.5 UniProtKB/TrEMBL
  ENST00000587658.5 UniProtKB/TrEMBL
  ENST00000588637.5 UniProtKB/TrEMBL
  ENST00000588881 ENTREZGENE
  ENST00000588881.5 UniProtKB/Swiss-Prot
  ENST00000589786 ENTREZGENE
  ENST00000589786.5 UniProtKB/Swiss-Prot
  ENST00000590385.2 UniProtKB/TrEMBL
  ENST00000590771.5 UniProtKB/TrEMBL
  ENST00000590906.5 UniProtKB/TrEMBL
  ENST00000683859 ENTREZGENE
  ENST00000683859.1 UniProtKB/Swiss-Prot
GTEx ENSG00000153885 GTEx
HGNC ID HGNC:23297 ENTREZGENE
Human Proteome Map KCTD15 Human Proteome Map
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KCTD1-15-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KCTD15_T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:79047 UniProtKB/Swiss-Prot
NCBI Gene 79047 ENTREZGENE
OMIM 615240 OMIM
PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KCTD1-15_CTD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134916319 PharmGKB
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A8K600 ENTREZGENE
  B4DGD9 ENTREZGENE, UniProtKB/TrEMBL
  K7EIF1_HUMAN UniProtKB/TrEMBL
  K7EM48_HUMAN UniProtKB/TrEMBL
  K7EN63_HUMAN UniProtKB/TrEMBL
  K7EPF0_HUMAN UniProtKB/TrEMBL
  K7EQS3_HUMAN UniProtKB/TrEMBL
  KCD15_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q9BVI6 ENTREZGENE
  V9GYY8_HUMAN UniProtKB/TrEMBL
UniProt Secondary A8K600 UniProtKB/Swiss-Prot
  Q9BVI6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-25 KCTD15  potassium channel tetramerization domain containing 15    potassium channel tetramerisation domain containing 15  Symbol and/or name change 5135510 APPROVED