Mtmr2 (myotubularin related protein 2)

Gene: Mtmr2 (myotubularin related protein 2) Ictidomys tridecemlineatus

Analyze

Symbol:

Mtmr2

Name:

myotubularin related protein 2

RGD ID:

12731680

Description:

ENCODES a protein that exhibits identical protein binding (inferred); phosphatidylinositol phosphate phosphatase activity (inferred); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (inferred); INVOLVED IN dendritic spine maintenance (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

myotubularin related protein 2, transcript variant X1; myotubularin related protein 2, transcript variant X2; myotubularin related protein 2, transcript variant X3; myotubularin-related protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,065 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936700	1,790,064 - 1,873,034 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936700	1,790,592 - 1,873,019 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

ataxia telangiectasia (ISO)

Charcot-Marie-Tooth disease (ISO)

Charcot-Marie-Tooth disease type 4 (ISO)

Charcot-Marie-Tooth disease type 4B1 (ISO)

genetic disease (ISO)

intellectual disability (ISO)

mosaic variegated aneuploidy syndrome 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dendritic spine maintenance (ISO)

lipid metabolic process (IEA)

myelin assembly (IEA,ISO)

myelination (IEA,ISO)

negative regulation of endocytosis (ISO)

negative regulation of excitatory postsynaptic potential (ISO)

negative regulation of myelination (IEA,ISO)

negative regulation of receptor catabolic process (ISO)

negative regulation of receptor internalization (ISO)

neuron development (IEA,ISO)

phosphatidylinositol dephosphorylation (IEA,ISO)

phosphatidylinositol metabolic process (IEA,ISO)

positive regulation of early endosome to late endosome transport (ISO)

regulation of phosphatidylinositol dephosphorylation (IEA)

Cellular Component

axon (ISO)

cytoplasm (IEA)

cytosol (IEA)

dendrite (ISO)

dendritic spine (ISO)

early endosome membrane (IEA)

intracellular membrane-bounded organelle (IEA)

membrane (IEA)

nucleus (IEA)

postsynaptic density (ISO)

synaptic membrane (ISO)

synaptic vesicle (ISO)

vacuolar membrane (IEA)

Molecular Function

identical protein binding (IEA)

phosphatidylinositol phosphate phosphatase activity (IEA)

phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (IEA)

phosphatidylinositol-3-phosphate phosphatase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Mtmr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,065 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936700	1,790,064 - 1,873,034 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936700	1,790,592 - 1,873,019 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTMR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	95,832,880 - 95,924,107 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	95,821,766 - 95,925,315 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	95,566,044 - 95,657,271 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	95,205,694 - 95,296,920 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	95,205,693 - 95,296,920	NCBI
Celera	11	92,864,432 - 92,955,746 (-)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI
HuRef	11	91,631,843 - 91,723,157 (-)	NCBI		HuRef
CHM1_1	11	95,449,060 - 95,540,399 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	95,840,305 - 95,931,520 (-)	NCBI		T2T-CHM13v2.0

Mtmr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	13,660,397 - 13,720,192 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	13,659,706 - 13,717,777 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	13,747,260 - 13,808,896 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	13,748,410 - 13,806,481 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	13,553,625 - 13,610,925 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	13,498,807 - 13,556,194 (+)	NCBI		MGSCv36	mm8
Celera	9	11,027,704 - 11,084,917 (+)	NCBI		Celera
Cytogenetic Map	9	A1	NCBI
cM Map	9	3.44	NCBI

Mtmr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	18,899,303 - 18,949,767 (+)	NCBI		GRCr8
mRatBN7.2	8	10,617,993 - 10,670,724 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	10,617,993 - 10,668,172 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	14,604,331 - 14,654,971 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	12,902,057 - 12,952,697 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	10,878,541 - 10,929,074 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	12,283,471 - 12,334,014 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	12,284,528 - 12,333,316 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	12,233,710 - 12,284,290 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	10,556,644 - 10,606,844 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	10,557,636 - 10,605,951 (+)	NCBI
Celera	8	12,118,312 - 12,168,683 (+)	NCBI		Celera
Cytogenetic Map	8	q12	NCBI

Mtmr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	693,743 - 750,154 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	693,743 - 764,377 (-)	NCBI	ChiLan1.0	ChiLan1.0

MTMR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	96,680,045 - 96,773,841 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	97,771,513 - 97,865,297 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	90,839,577 - 90,929,731 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	94,367,038 - 94,457,138 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	94,367,038 - 94,457,138 (-)	Ensembl	panpan1.1		panPan2

MTMR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	5,194,772 - 5,316,441 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	5,194,604 - 5,315,375 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	5,205,909 - 5,327,596 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	5,366,974 - 5,491,223 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	5,366,812 - 5,491,187 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	5,164,226 - 5,285,897 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	5,225,833 - 5,347,545 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	5,273,521 - 5,395,231 (+)	NCBI		UU_Cfam_GSD_1.0

MTMR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	27,854,491 - 27,974,423 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	27,864,335 - 27,974,448 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	31,847,124 - 31,938,450 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTMR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	87,090,401 - 87,181,057 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	87,087,191 - 87,180,497 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	38,639,598 - 38,727,631 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mtmr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624735	40,673,156 - 40,770,693 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005338017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005338018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021735085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000002286 ⟹ ENSSTOP00000002043

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936700	1,811,325 - 1,873,034 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000030414 ⟹ ENSSTOP00000030295

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936700	1,790,064 - 1,873,034 (+)	Ensembl

RefSeq Acc Id:

XM_005338017 ⟹ XP_005338074

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,063 (-)	NCBI
SpeTri2.0	NW_004936700	1,790,601 - 1,873,019 (+)	NCBI

Sequence:

show sequence

GGCAGAGGTACGCAGGCAGCGCCGCGCTTCAGGCTCGGCGTCCGAGGGGCGCCGCGGGGTCCTC
CCGAGGCCGCAGACCCCGGGCGCGGTGCAGTCTGGGGGAACATGGCCGCTTCCGGTCTTCCTCC
CAGGCCGGCGCTGGCTTGACCGCGGCCCCTGCCTGGTGCACTCCGCCCTCCGCTCCCTGCCTGG
CAGTCGCGGAGGTCCCTTCAGCCTTTTGCTCTCGTTGCCCCTGCTGGGCCATGGAGAAGAGCTC
GAGCTGCGAGAGTCTGGGCTCCCAGCCCGCAGCGGCTCGGCCGCCCAGCGTGGACTCCCTGTCC
AGTGCCTCCACTTCTCATTCAGAGAATTCAGTGCATACAAAATCAGCTTCTGTTGTGTCATCAG
ATTCCATTTCAACTTCTGCAGAGAACTTTTCTCCTGATTTGAGGGTCCTGAGGGAATCTAACAA
ATTAGCAGAAATGGAAGAACCACCCTTGCTTCCAGGAGAAAATATTAAAGATATGGCCAAAGAT
GTAACTTACATCTGTCCATTTACTGGTGCTGTAAGAGGAACTCTGACTGTCACGAATTACAGGT
TATATTTCAAAAGCATGGAACGGGACCCCCCATTTGTTTTAGATGCTTCTCTTGGTGTTATAAG
TAGAGTGGAAAAAATTGGTGGTGCCTCTAGTCGAGGTGAAAATTCTTATGGACTGGAAACTGTG
TGTAAGGATATTAGGAATTTACGATTTGCTCATAAACCTGAGGGGCGAACAAGAAGATCCATAT
TTGAGAATCTAATGAAATATGCATTTCCTGTCTCTAATAACCTGCCTCTTTTTGCTTTTGAATA
CAAAGAAGTATTCCCAGAAAATGGGTGGAAGCTATATGATTCTCTTTTAGAGTATAGAAGGCAG
GGAATTCCAAATGAAAGCTGGAGAATAACTAAGATAAATGAACGATATGAACTTTGTGATACAT
ACCCTGCCTTGTTGGTTGTACCATCAAATATTCCTGATGAAGAATTAAAGAGAGTGGCATCCTT
TAGGTCAAGGGGCCGCATCCCAGTTTTATCCTGGATTCATCCTGAAAGTCAAGCCACAATCACT
CGATGTAGCCAGCCCATGGTAGGAGTGAGTGGGAAACGAAACAAAGATGATGAAAAATACCTTC
AAGCCATCATGGATTCCAATGCCCAGTCTCACAAAATCTTTATATTTGATGCCCGACCAAGTGT
TAATGCTGTTGCCAATAAGGCAAAAGGTGGAGGTTATGAAAGTGAAGATGCTTATCAAAACGCA
GAACTAGTTTTTCTGGATATCCACAATATTCATGTCATGAGAGAATCATTACGAAAACTTAAAG
AGATTGTGTACCCCAACATTGAGGAAACTCACTGGCTGTCTAACTTGGAATCTACTCACTGGCT
AGAACATATTAAGCTTATTCTTGCAGGGGCTCTTCGGGTTGCTGACAAGGTAGAGTCAGGGAAG
ACGTCTGTAGTGGTACACTGCAGTGATGGTTGGGATCGCACAGCTCAGCTAACTTCTCTAGCCA
TGCTTATGTTGGATGGATACTATCGCACAATACGAGGATTTGAAGTCCTTGTGGAGAAAGAGTG
GCTAAGCTTTGGACATAGATTTCAACTAAGAGTTGGCCATGGAGATAAGAACCATGCAGATGCA
GAAAGATCACCTGTTTTCCTTCAGTTTATTGACTGTGTGTGGCAAATGACAAGACAGTTTCCTA
CTGCATTTGAATTCAATGAATATTTTCTCATTACCATTTTGGACCACCTGTACAGCTGCTTGTT
TGGAACATTCCTTTGTAACAGTGAACAGCAGAGAGGAAAAGAGAATCTTCCTAAGAGGACTGTG
TCACTGTGGTCTTACATAAATAGCCAGCTGGAAGACTTCACTAATCCTCTCTATGGGAGTTATT
GCAATCATGTCCTTTATCCAGTAGCCAGCATGCGCCACCTAGAGCTCTGGGTGGGATATTACAT
AAGATGGAATCCACGGATGAAACCACAGGAACCTATTCACAATAGATACAAAGAACTTCTTGCT
AAACGAGCAGAGCTTCAAAAAAAAGTAGAGGAACTACAGAGAGAAATTTCCAACCGATCAACCT
CATCCTCAGAGAGAGCCAGCTCTCCTGCACAATGTGTCACTCCTGTCCAGACTGTTGTGTGAAA
GGATTGTGACCAAGGACATCATTGATATGAACTCTTCATTACAGTGGCAGCTTTATGAGTAGAA
AGTCTCCCTATTTTGAACTCATCTCTGAGAGAAAAGTTCAGATGCTTTATTTATTTTAAGTCTC
TCTAAGATGAGTTTAGAACTATAGCAATGTGGGTGGCTTAAGAGAAACATGAAATTACATGATT
ATGACACTAAACCTGTTCAGACATCTGGTAAAAGTACAAACTACTTTAGAAATACACCTCTTGA
TTGGAGAAAGCTCACTGCACAGAGCCAAGTTTTCAAACCAAATCAACACTGAAGTTTTGTGGCA
TCATCTATATTAGGCCTTTATGTATGACAGATCAAAATCATTTAATACCTTTTTCTCCATCATG
GGCTTTTCTTCATGTAGTAATTGATTTACATTGATCACTGTTCAACCTCCATTCTTAATATAGT
GAAAGGCAACACATAGTGTGGCAGTAGTTAAAAATTGCTGCTGACATTATTTATATACTTAATT
AGGGCATTCTACTGTTCCAGAATGATGCCTTAGAAATATGCTTAGGGGACCATAAGGAGACAAA
GTGGAAGCCATTTTGGAGTTCAAAGAATTCTATGACATTCAGATTAATTTTCTTTTTTTTCCAA
TTAAAAAAAAATTGTACCCCTTTCTGTTTTACCCCTTGCTAATTGGGAAGTTTTAAAGTTTAAA
AAAGGCTTTTTTGAAGACTGTATAAATAGCATATGGTGAGAAGTATAATGCTTAAATTTTACAT
GAAATACTTCACTACTTTATTCCACCAAATTAAGCCTACCAAAGAACAAACCGCATTTAAAAAT
GAATTACAATCTCAATACCAGTAAAAGAAATCTTGCTTCACTGCTTGCCTGAGACTTTGGTGCT
GGTATGGACATTTCACTGTCTGATGTCTATTTTACTCTATATGAGAGCCATATGTAATGTACTG
TAACTAAGAAGCTTCTTGTCCCTTGGTCTTTTAATTAAAAGAAATTTCAGCTAATTTTAAAA

hide sequence

RefSeq Acc Id:

XM_005338018 ⟹ XP_005338075

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,061 (-)	NCBI
SpeTri2.0	NW_004936700	1,790,592 - 1,873,019 (+)	NCBI

Sequence:

show sequence

GTGGGGCGGGGCAGAGGTACGCAGGCAGCGCCGCGCTTCAGGCTCGGCGTCCGAGGGGCGCCGC
GGGGTCCTCCCGAGGCCGCAGACCCCGGGCGCGGTGCAGTCTGGGGGAACATGGCCGCTTCCGG
TCTTCCTCCCAGGCCGGCGCTGGCTTGACCGCGGCCCCTGCCTGGTGCACTCCGCCCTCCGCTC
CCTGCCTGGCAGTCGCGGAGGTCCCTTCAGCCTTTTGCTCTCGTTGCCCCTGCTGGGCCATGGA
GAAGAGCTCGAGCTGCGAGAGTCTGGGCTCCCAGCCCGCAGCGGCTCGGCCGCCCAGCGTGGAC
TCCCTGTCCAGTTAATGTGTTAAGAGCCATTGACATTTGAAGATCATCAGAAGTGAAGATAAAA
CATCTCAAAAAATTATAATTGCCTCCACTTCTCATTCAGAGAATTCAGTGCATACAAAATCAGC
TTCTGTTGTGTCATCAGATTCCATTTCAACTTCTGCAGAGAACTTTTCTCCTGATTTGAGGGTC
CTGAGGGAATCTAACAAATTAGCAGAAATGGAAGAACCACCCTTGCTTCCAGGAGAAAATATTA
AAGATATGGCCAAAGATGTAACTTACATCTGTCCATTTACTGGTGCTGTAAGAGGAACTCTGAC
TGTCACGAATTACAGGTTATATTTCAAAAGCATGGAACGGGACCCCCCATTTGTTTTAGATGCT
TCTCTTGGTGTTATAAGTAGAGTGGAAAAAATTGGTGGTGCCTCTAGTCGAGGTGAAAATTCTT
ATGGACTGGAAACTGTGTGTAAGGATATTAGGAATTTACGATTTGCTCATAAACCTGAGGGGCG
AACAAGAAGATCCATATTTGAGAATCTAATGAAATATGCATTTCCTGTCTCTAATAACCTGCCT
CTTTTTGCTTTTGAATACAAAGAAGTATTCCCAGAAAATGGGTGGAAGCTATATGATTCTCTTT
TAGAGTATAGAAGGCAGGGAATTCCAAATGAAAGCTGGAGAATAACTAAGATAAATGAACGATA
TGAACTTTGTGATACATACCCTGCCTTGTTGGTTGTACCATCAAATATTCCTGATGAAGAATTA
AAGAGAGTGGCATCCTTTAGGTCAAGGGGCCGCATCCCAGTTTTATCCTGGATTCATCCTGAAA
GTCAAGCCACAATCACTCGATGTAGCCAGCCCATGGTAGGAGTGAGTGGGAAACGAAACAAAGA
TGATGAAAAATACCTTCAAGCCATCATGGATTCCAATGCCCAGTCTCACAAAATCTTTATATTT
GATGCCCGACCAAGTGTTAATGCTGTTGCCAATAAGGCAAAAGGTGGAGGTTATGAAAGTGAAG
ATGCTTATCAAAACGCAGAACTAGTTTTTCTGGATATCCACAATATTCATGTCATGAGAGAATC
ATTACGAAAACTTAAAGAGATTGTGTACCCCAACATTGAGGAAACTCACTGGCTGTCTAACTTG
GAATCTACTCACTGGCTAGAACATATTAAGCTTATTCTTGCAGGGGCTCTTCGGGTTGCTGACA
AGGTAGAGTCAGGGAAGACGTCTGTAGTGGTACACTGCAGTGATGGTTGGGATCGCACAGCTCA
GCTAACTTCTCTAGCCATGCTTATGTTGGATGGATACTATCGCACAATACGAGGATTTGAAGTC
CTTGTGGAGAAAGAGTGGCTAAGCTTTGGACATAGATTTCAACTAAGAGTTGGCCATGGAGATA
AGAACCATGCAGATGCAGAAAGATCACCTGTTTTCCTTCAGTTTATTGACTGTGTGTGGCAAAT
GACAAGACAGTTTCCTACTGCATTTGAATTCAATGAATATTTTCTCATTACCATTTTGGACCAC
CTGTACAGCTGCTTGTTTGGAACATTCCTTTGTAACAGTGAACAGCAGAGAGGAAAAGAGAATC
TTCCTAAGAGGACTGTGTCACTGTGGTCTTACATAAATAGCCAGCTGGAAGACTTCACTAATCC
TCTCTATGGGAGTTATTGCAATCATGTCCTTTATCCAGTAGCCAGCATGCGCCACCTAGAGCTC
TGGGTGGGATATTACATAAGATGGAATCCACGGATGAAACCACAGGAACCTATTCACAATAGAT
ACAAAGAACTTCTTGCTAAACGAGCAGAGCTTCAAAAAAAAGTAGAGGAACTACAGAGAGAAAT
TTCCAACCGATCAACCTCATCCTCAGAGAGAGCCAGCTCTCCTGCACAATGTGTCACTCCTGTC
CAGACTGTTGTGTGAAAGGATTGTGACCAAGGACATCATTGATATGAACTCTTCATTACAGTGG
CAGCTTTATGAGTAGAAAGTCTCCCTATTTTGAACTCATCTCTGAGAGAAAAGTTCAGATGCTT
TATTTATTTTAAGTCTCTCTAAGATGAGTTTAGAACTATAGCAATGTGGGTGGCTTAAGAGAAA
CATGAAATTACATGATTATGACACTAAACCTGTTCAGACATCTGGTAAAAGTACAAACTACTTT
AGAAATACACCTCTTGATTGGAGAAAGCTCACTGCACAGAGCCAAGTTTTCAAACCAAATCAAC
ACTGAAGTTTTGTGGCATCATCTATATTAGGCCTTTATGTATGACAGATCAAAATCATTTAATA
CCTTTTTCTCCATCATGGGCTTTTCTTCATGTAGTAATTGATTTACATTGATCACTGTTCAACC
TCCATTCTTAATATAGTGAAAGGCAACACATAGTGTGGCAGTAGTTAAAAATTGCTGCTGACAT
TATTTATATACTTAATTAGGGCATTCTACTGTTCCAGAATGATGCCTTAGAAATATGCTTAGGG
GACCATAAGGAGACAAAGTGGAAGCCATTTTGGAGTTCAAAGAATTCTATGACATTCAGATTAA
TTTTCTTTTTTTTCCAATTAAAAAAAAATTGTACCCCTTTCTGTTTTACCCCTTGCTAATTGGG
AAGTTTTAAAGTTTAAAAAAGGCTTTTTTGAAGACTGTATAAATAGCATATGGTGAGAAGTATA
ATGCTTAAATTTTACATGAAATACTTCACTACTTTATTCCACCAAATTAAGCCTACCAAAGAAC
AAACCGCATTTAAAAATGAATTACAATCTCAATACCAGTAAAAGAAATCTTGCTTCACTGCTTG
CCTGAGACTTTGGTGCTGGTATGGACATTTCACTGTCTGATGTCTATTTTACTCTATATGAGAG
CCATATGTAATGTACTGTAACTAAGAAGCTTCTTGTCCCTTGGTCTTTTAATTAAAAGAAATTT
CAGCTAATTTTAAAA

hide sequence

RefSeq Acc Id:

XM_021735085 ⟹ XP_021590760

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,734,286 (-)	NCBI
SpeTri2.0	NW_004936700	1,811,326 - 1,873,019 (+)	NCBI

Sequence:

show sequence

TATTCATTTTGATTTTTCAATTCATGTCTAGCTTCATTCTGCTAAACCAGGATTCTTTGATGGC
AAAGAGGTGTCCTATTCAAGCCTTCATTAGTGCCTCCACTTCTCATTCAGAGAATTCAGTGCAT
ACAAAATCAGCTTCTGTTGTGTCATCAGATTCCATTTCAACTTCTGCAGAGAACTTTTCTCCTG
ATTTGAGGGTCCTGAGGGAATCTAACAAATTAGCAGAAATGGAAGAACCACCCTTGCTTCCAGG
AGAAAATATTAAAGATATGGCCAAAGATGTAACTTACATCTGTCCATTTACTGGTGCTGTAAGA
GGAACTCTGACTGTCACGAATTACAGGTTATATTTCAAAAGCATGGAACGGGACCCCCCATTTG
TTTTAGATGCTTCTCTTGGTGTTATAAGTAGAGTGGAAAAAATTGGTGGTGCCTCTAGTCGAGG
TGAAAATTCTTATGGACTGGAAACTGTGTGTAAGGATATTAGGAATTTACGATTTGCTCATAAA
CCTGAGGGGCGAACAAGAAGATCCATATTTGAGAATCTAATGAAATATGCATTTCCTGTCTCTA
ATAACCTGCCTCTTTTTGCTTTTGAATACAAAGAAGTATTCCCAGAAAATGGGTGGAAGCTATA
TGATTCTCTTTTAGAGTATAGAAGGCAGGGAATTCCAAATGAAAGCTGGAGAATAACTAAGATA
AATGAACGATATGAACTTTGTGATACATACCCTGCCTTGTTGGTTGTACCATCAAATATTCCTG
ATGAAGAATTAAAGAGAGTGGCATCCTTTAGGTCAAGGGGCCGCATCCCAGTTTTATCCTGGAT
TCATCCTGAAAGTCAAGCCACAATCACTCGATGTAGCCAGCCCATGGTAGGAGTGAGTGGGAAA
CGAAACAAAGATGATGAAAAATACCTTCAAGCCATCATGGATTCCAATGCCCAGTCTCACAAAA
TCTTTATATTTGATGCCCGACCAAGTGTTAATGCTGTTGCCAATAAGGCAAAAGGTGGAGGTTA
TGAAAGTGAAGATGCTTATCAAAACGCAGAACTAGTTTTTCTGGATATCCACAATATTCATGTC
ATGAGAGAATCATTACGAAAACTTAAAGAGATTGTGTACCCCAACATTGAGGAAACTCACTGGC
TGTCTAACTTGGAATCTACTCACTGGCTAGAACATATTAAGCTTATTCTTGCAGGGGCTCTTCG
GGTTGCTGACAAGGTAGAGTCAGGGAAGACGTCTGTAGTGGTACACTGCAGTGATGGTTGGGAT
CGCACAGCTCAGCTAACTTCTCTAGCCATGCTTATGTTGGATGGATACTATCGCACAATACGAG
GATTTGAAGTCCTTGTGGAGAAAGAGTGGCTAAGCTTTGGACATAGATTTCAACTAAGAGTTGG
CCATGGAGATAAGAACCATGCAGATGCAGAAAGATCACCTGTTTTCCTTCAGTTTATTGACTGT
GTGTGGCAAATGACAAGACAGTTTCCTACTGCATTTGAATTCAATGAATATTTTCTCATTACCA
TTTTGGACCACCTGTACAGCTGCTTGTTTGGAACATTCCTTTGTAACAGTGAACAGCAGAGAGG
AAAAGAGAATCTTCCTAAGAGGACTGTGTCACTGTGGTCTTACATAAATAGCCAGCTGGAAGAC
TTCACTAATCCTCTCTATGGGAGTTATTGCAATCATGTCCTTTATCCAGTAGCCAGCATGCGCC
ACCTAGAGCTCTGGGTGGGATATTACATAAGATGGAATCCACGGATGAAACCACAGGAACCTAT
TCACAATAGATACAAAGAACTTCTTGCTAAACGAGCAGAGCTTCAAAAAAAAGTAGAGGAACTA
CAGAGAGAAATTTCCAACCGATCAACCTCATCCTCAGAGAGAGCCAGCTCTCCTGCACAATGTG
TCACTCCTGTCCAGACTGTTGTGTGAAAGGATTGTGACCAAGGACATCATTGATATGAACTCTT
CATTACAGTGGCAGCTTTATGAGTAGAAAGTCTCCCTATTTTGAACTCATCTCTGAGAGAAAAG
TTCAGATGCTTTATTTATTTTAAGTCTCTCTAAGATGAGTTTAGAACTATAGCAATGTGGGTGG
CTTAAGAGAAACATGAAATTACATGATTATGACACTAAACCTGTTCAGACATCTGGTAAAAGTA
CAAACTACTTTAGAAATACACCTCTTGATTGGAGAAAGCTCACTGCACAGAGCCAAGTTTTCAA
ACCAAATCAACACTGAAGTTTTGTGGCATCATCTATATTAGGCCTTTATGTATGACAGATCAAA
ATCATTTAATACCTTTTTCTCCATCATGGGCTTTTCTTCATGTAGTAATTGATTTACATTGATC
ACTGTTCAACCTCCATTCTTAATATAGTGAAAGGCAACACATAGTGTGGCAGTAGTTAAAAATT
GCTGCTGACATTATTTATATACTTAATTAGGGCATTCTACTGTTCCAGAATGATGCCTTAGAAA
TATGCTTAGGGGACCATAAGGAGACAAAGTGGAAGCCATTTTGGAGTTCAAAGAATTCTATGAC
ATTCAGATTAATTTTCTTTTTTTTCCAATTAAAAAAAAATTGTACCCCTTTCTGTTTTACCCCT
TGCTAATTGGGAAGTTTTAAAGTTTAAAAAAGGCTTTTTTGAAGACTGTATAAATAGCATATGG
TGAGAAGTATAATGCTTAAATTTTACATGAAATACTTCACTACTTTATTCCACCAAATTAAGCC
TACCAAAGAACAAACCGCATTTAAAAATGAATTACAATCTCAATACCAGTAAAAGAAATCTTGC
TTCACTGCTTGCCTGAGACTTTGGTGCTGGTATGGACATTTCACTGTCTGATGTCTATTTTACT
CTATATGAGAGCCATATGTAATGTACTGTAACTAAGAAGCTTCTTGTCCCTTGGTCTTTTAATT
AAAAGAAATTTCAGCTAATTTTAAAA

hide sequence

RefSeq Acc Id:

XM_040285118 ⟹ XP_040141052

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,702,660 (-)	NCBI

RefSeq Acc Id:

XM_040285119 ⟹ XP_040141053

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,065 (-)	NCBI

RefSeq Acc Id:

XM_040285120 ⟹ XP_040141054

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,061 (-)	NCBI

RefSeq Acc Id:

XM_040285121 ⟹ XP_040141055

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,754,614 (-)	NCBI

RefSeq Acc Id:

XM_040285122 ⟹ XP_040141056

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	80,672,667 - 80,755,061 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005338074	(Get FASTA)	NCBI Sequence Viewer
	XP_005338075	(Get FASTA)	NCBI Sequence Viewer
	XP_021590760	(Get FASTA)	NCBI Sequence Viewer
	XP_040141052	(Get FASTA)	NCBI Sequence Viewer
	XP_040141053	(Get FASTA)	NCBI Sequence Viewer
	XP_040141054	(Get FASTA)	NCBI Sequence Viewer
	XP_040141055	(Get FASTA)	NCBI Sequence Viewer
	XP_040141056	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000002043.3
	ENSSTOP00000030295.1
GenBank Protein	KAG3286397	(Get FASTA)	NCBI Sequence Viewer
	KAG3286398	(Get FASTA)	NCBI Sequence Viewer
	KAG3286399	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005338074 ⟸ XM_005338017
- Peptide Label:	isoform X1
- UniProtKB:	A0A287D9R4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKSSSCESLGSQPAAARPPSVDSLSSASTSHSENSVHTKSASVVSSDSISTSAENFSPDLRVL RESNKLAEMEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDAS LGVISRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNNLPL FAFEYKEVFPENGWKLYDSLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPSNIPDEELK RVASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRNKDDEKYLQAIMDSNAQSHKIFIFD ARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSNLE STHWLEHIKLILAGALRVADKVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVL VEKEWLSFGHRFQLRVGHGDKNHADAERSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHL YSCLFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYCNHVLYPVASMRHLELW VGYYIRWNPRMKPQEPIHNRYKELLAKRAELQKKVEELQREISNRSTSSSERASSPAQCVTPVQ TVV hide sequence

RefSeq Acc Id:	XP_005338075 ⟸ XM_005338018
- Peptide Label:	isoform X2
- UniProtKB:	I3M047 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVISRVE KIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNNLPLFAFEYKEV FPENGWKLYDSLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPSNIPDEELKRVASFRSR GRIPVLSWIHPESQATITRCSQPMVGVSGKRNKDDEKYLQAIMDSNAQSHKIFIFDARPSVNAV ANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSNLESTHWLEHI KLILAGALRVADKVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSF GHRFQLRVGHGDKNHADAERSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTF LCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYCNHVLYPVASMRHLELWVGYYIRWN PRMKPQEPIHNRYKELLAKRAELQKKVEELQREISNRSTSSSERASSPAQCVTPVQTVV hide sequence

RefSeq Acc Id:	XP_021590760 ⟸ XM_021735085
- Peptide Label:	isoform X2
- UniProtKB:	I3M047 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSFILLNQDSLMAKRCPIQAFISASTSHSENSVHTKSASVVSSDSISTSAENFSPDLRVLRES NKLAEMEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGV ISRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNNLPLFAF EYKEVFPENGWKLYDSLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPSNIPDEELKRVA SFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRNKDDEKYLQAIMDSNAQSHKIFIFDARP SVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSNLESTH WLEHIKLILAGALRVADKVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEK EWLSFGHRFQLRVGHGDKNHADAERSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSC LFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYCNHVLYPVASMRHLELWVGY YIRWNPRMKPQEPIHNRYKELLAKRAELQKKVEELQREISNRSTSSSERASSPAQCVTPVQTVV hide sequence

RefSeq Acc Id:	XP_040141053 ⟸ XM_040285119
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040141056 ⟸ XM_040285122
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_040141054 ⟸ XM_040285120
- Peptide Label:	isoform X2
- UniProtKB:	I3M047 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040141055 ⟸ XM_040285121
- Peptide Label:	isoform X2
- UniProtKB:	I3M047 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040141052 ⟸ XM_040285118
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSSTOP00000030295 ⟸ ENSSTOT00000030414

RefSeq Acc Id:

ENSSTOP00000002043 ⟸ ENSSTOT00000002286

Protein Domains

Myotubularin phosphatase Tyrosine specific protein phosphatases

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000002284	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000002286.3	UniProtKB/TrEMBL
	ENSSTOT00000030414.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
InterPro	GRAM	UniProtKB/TrEMBL
	Myotubularin-like_Pase_dom	UniProtKB/TrEMBL
	Myotubularin_fam	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	Prot-tyrosine_phosphatase-like	UniProtKB/TrEMBL
	Tyr_Pase_AS	UniProtKB/TrEMBL
	Tyr_Pase_cat	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_dom	UniProtKB/TrEMBL
NCBI Gene	Mtmr2	ENTREZGENE
PANTHER	MYOTUBULARIN-RELATED PROTEIN 2	UniProtKB/TrEMBL
	PTHR10807	UniProtKB/TrEMBL
Pfam	GRAM	UniProtKB/TrEMBL
	Myotub-related	UniProtKB/TrEMBL
PROSITE	PPASE_MYOTUBULARIN	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_1	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_2	UniProtKB/TrEMBL
SMART	GRAM	UniProtKB/TrEMBL
	PTPc_motif	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF52799	UniProtKB/TrEMBL
UniProt	A0A287D9R4	ENTREZGENE, UniProtKB/TrEMBL
	I3M047	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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