Fkbp7 (FKBP prolyl isomerase 7) - Rat Genome Database

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Gene: Fkbp7 (FKBP prolyl isomerase 7) Ictidomys tridecemlineatus
Analyze
Symbol: Fkbp7
Name: FKBP prolyl isomerase 7
RGD ID: 12686508
Description: ENCODES a protein that exhibits calcium ion binding (inferred); isomerase activity (inferred); metal ion binding (inferred); ASSOCIATED WITH dilated cardiomyopathy 1G (ortholog); dystonia 16 (ortholog); FOUND IN endoplasmic reticulum (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FK506 binding protein 7; FK506 binding protein 7, transcript variant X1; FK506 binding protein 7, transcript variant X2; peptidyl-prolyl cis-trans isomerase FKBP7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303139,126,005 - 139,138,115 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365097,679,819 - 7,691,789 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365097,679,908 - 7,690,881 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Fkbp7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303139,126,005 - 139,138,115 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365097,679,819 - 7,691,789 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365097,679,908 - 7,690,881 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FKBP7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382178,463,664 - 178,478,600 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2178,463,664 - 178,478,600 (-)EnsemblGRCh38hg38GRCh38
GRCh372179,328,391 - 179,343,327 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362179,038,267 - 179,051,568 (-)NCBINCBI36Build 36hg18NCBI36
Build 342179,155,531 - 179,168,829NCBI
Celera2172,931,277 - 172,946,242 (-)NCBICelera
Cytogenetic Map2q31.2NCBI
HuRef2171,199,075 - 171,213,798 (-)NCBIHuRef
CHM1_12179,334,423 - 179,349,378 (-)NCBICHM1_1
T2T-CHM13v2.02178,946,457 - 178,961,394 (-)NCBIT2T-CHM13v2.0
Fkbp7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39276,493,378 - 76,503,442 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl276,493,388 - 76,503,460 (-)EnsemblGRCm39 Ensembl
GRCm38276,663,034 - 76,673,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl276,663,044 - 76,673,116 (-)EnsemblGRCm38mm10GRCm38
MGSCv37276,501,091 - 76,511,155 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36276,463,883 - 76,473,909 (-)NCBIMGSCv36mm8
Celera278,324,711 - 78,334,771 (-)NCBICelera
Cytogenetic Map2C3NCBI
cM Map245.09NCBI
Fkbp7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8382,016,647 - 82,030,913 (-)NCBIGRCr8
mRatBN7.2361,609,384 - 61,623,710 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl361,608,557 - 61,623,280 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx364,964,743 - 64,976,673 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0373,548,393 - 73,560,326 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0371,315,999 - 71,327,944 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0363,522,480 - 63,535,835 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl363,522,403 - 63,535,991 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0370,095,618 - 70,107,822 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4359,361,703 - 59,373,382 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1359,258,213 - 59,269,689 (-)NCBI
Celera361,081,934 - 61,106,955 (-)NCBICelera
Cytogenetic Map3q24NCBI
Fkbp7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540318,373,375 - 18,410,627 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540318,373,372 - 18,385,172 (+)NCBIChiLan1.0ChiLan1.0
FKBP7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21381,111,209 - 81,127,198 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B81,126,048 - 81,142,172 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B65,721,439 - 65,736,351 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B183,425,612 - 183,440,522 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B183,425,612 - 183,440,522 (-)Ensemblpanpan1.1panPan2
FKBP7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13622,090,094 - 22,101,230 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3622,090,246 - 22,101,194 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3622,108,507 - 22,119,622 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03622,233,808 - 22,244,933 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3622,233,960 - 22,244,909 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13622,343,154 - 22,354,275 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03622,306,017 - 22,317,125 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03622,422,281 - 22,433,398 (-)NCBIUU_Cfam_GSD_1.0
FKBP7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1584,168,587 - 84,182,860 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11584,168,483 - 84,182,870 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21593,702,224 - 93,716,733 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FKBP7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11064,016,060 - 64,028,890 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1064,016,232 - 64,028,767 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040135,545,474 - 135,560,616 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fkbp7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624844433,255 - 444,448 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624844434,360 - 444,460 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000006173   ⟹   ENSSTOP00000005522
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365097,679,819 - 7,691,789 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000035750   ⟹   ENSSTOP00000032518
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365097,685,595 - 7,691,789 (-)Ensembl
RefSeq Acc Id: XM_005324656   ⟹   XP_005324713
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303139,126,005 - 139,138,103 (-)NCBI
SpeTri2.0NW_0049365097,679,908 - 7,690,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725955   ⟹   XP_021581630
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303139,126,005 - 139,138,115 (-)NCBI
SpeTri2.0NW_0049365097,679,912 - 7,690,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040294540   ⟹   XP_040150474
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303139,126,005 - 139,138,103 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005324713 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581630 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150474 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000005522.2
  ENSSTOP00000032518.1
GenBank Protein KAG3274788 (Get FASTA)   NCBI Sequence Viewer  
  KAG3274789 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005324713   ⟸   XM_005324656
- Peptide Label: isoform X1
- UniProtKB: I3M7D9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021581630   ⟸   XM_021725955
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_040150474   ⟸   XM_040294540
- Peptide Label: isoform X1
- UniProtKB: I3M7D9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000032518   ⟸   ENSSTOT00000035750
RefSeq Acc Id: ENSSTOP00000005522   ⟸   ENSSTOT00000006173
Protein Domains
EF-hand   PPIase FKBP-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000006176 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000006173.3 UniProtKB/TrEMBL
  ENSSTOT00000035750.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.50.40 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  PPIase_dom_sf UniProtKB/TrEMBL
  PPIase_FKBP_dom UniProtKB/TrEMBL
NCBI Gene Fkbp7 ENTREZGENE
PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7 UniProtKB/TrEMBL
  PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
  FKBP_C UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  FKBP_PPIASE UniProtKB/TrEMBL
Superfamily-SCOP FKBP-like UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
UniProt A0A287DG36_ICTTR UniProtKB/TrEMBL
  I3M7D9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-06 Fkbp7  FKBP prolyl isomerase 7    FK506 binding protein 7  Symbol and/or name change 5135510 APPROVED