LOC101973945 (protein numb homolog) - Rat Genome Database

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Gene: LOC101973945 (protein numb homolog) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101973945
Name: protein numb homolog
RGD ID: 12677866
Description: INVOLVED IN nervous system development (inferred); positive regulation of neurogenesis (inferred); FOUND IN basolateral plasma membrane (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530349,409,596 - 49,411,573 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366561,600,111 - 1,602,066 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_040293896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_040293896   ⟹   XP_040149830
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530349,409,596 - 49,411,573 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040149830 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000027359.1
Reference Protein Sequences
RefSeq Acc Id: XP_040149830   ⟸   XM_040293896
- UniProtKB: A0A287D1E9 (UniProtKB/TrEMBL)
Protein Domains
PID


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000030490 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000042399.1 UniProtKB/TrEMBL
Gene3D-CATH Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) UniProtKB/TrEMBL
InterPro Numb/numb-like UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/TrEMBL
NCBI Gene LOC101973945 ENTREZGENE
PANTHER NUMB UniProtKB/TrEMBL
  PROTEIN NUMB HOMOLOG UniProtKB/TrEMBL
Pfam PID UniProtKB/TrEMBL
PIRSF Numb/numb-like UniProtKB/TrEMBL
PROSITE PID UniProtKB/TrEMBL
SMART PTB UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt A0A287D1E9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101973945  protein numb homolog  LOC101973945  protein numb homolog pseudogene  Symbol and/or name change 5135510 APPROVED