CUNH16orf95 (chromosome unknown C16orf95 homolog) - Rat Genome Database

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Gene: CUNH16orf95 (chromosome unknown C16orf95 homolog) Ictidomys tridecemlineatus
Analyze
Symbol: CUNH16orf95
Name: chromosome unknown C16orf95 homolog
RGD ID: 12614838
Description: ASSOCIATED WITH 16Q24.3 Microdeletion Syndrome (ortholog); KBG syndrome (ortholog); persistent fetal circulation syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: chromosome unknown open reading frame, human C16orf95; LOC101960606; uncharacterized protein C16orf95 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934926,090,141 - 26,096,838 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366411,843,874 - 1,850,488 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
CUNH16orf95
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934926,090,141 - 26,096,838 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366411,843,874 - 1,850,488 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C16orf95
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381687,302,814 - 87,317,392 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1687,083,562 - 87,317,420 (-)EnsemblGRCh38hg38GRCh38
GRCh371687,336,420 - 87,350,998 (-)NCBIGRCh37GRCh37hg19GRCh37
Celera1671,633,096 - 71,647,671 (-)NCBICelera
Cytogenetic Map16q24.2NCBI
HuRef1673,079,501 - 73,094,098 (-)NCBIHuRef
CHM1_11688,748,121 - 88,762,835 (-)NCBICHM1_1
T2T-CHM13v2.01693,373,698 - 93,388,274 (-)NCBIT2T-CHM13v2.0
1700018B08Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398122,257,515 - 122,271,077 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8122,257,519 - 122,271,059 (-)EnsemblGRCm39 Ensembl
GRCm388121,530,776 - 121,544,339 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8121,530,780 - 121,544,320 (-)EnsemblGRCm38mm10GRCm38
MGSCv378124,054,684 - 124,065,854 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368124,416,761 - 124,427,931 (-)NCBIMGSCv36mm8
Celera8125,751,956 - 125,763,485 (-)NCBICelera
Cytogenetic Map8E1NCBI
cM Map870.64NCBI
C19h16orf95
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81966,514,447 - 66,527,096 (-)NCBIGRCr8
mRatBN7.21949,605,818 - 49,618,466 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1949,605,818 - 49,618,702 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1956,396,688 - 56,409,251 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01957,080,798 - 57,093,360 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01959,295,192 - 59,307,760 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01953,467,806 - 53,481,093 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,468,054 - 53,477,420 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01964,204,383 - 64,216,534 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1948,852,927 - 48,866,670 (-)NCBICelera
Cytogenetic Map19q12NCBI
LOC102025174
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555411,795,301 - 1,807,870 (-)NCBIChiLan1.0ChiLan1.0
C18H16orf95
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21897,060,307 - 97,075,197 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116102,976,319 - 102,991,187 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01667,973,069 - 67,987,773 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11687,298,076 - 87,312,980 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1687,298,076 - 87,312,629 (-)Ensemblpanpan1.1panPan2
C5H16orf95
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1565,738,445 - 65,757,635 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha565,749,916 - 65,769,119 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0565,960,264 - 65,979,464 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1565,984,220 - 66,003,457 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0565,816,588 - 65,835,807 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0566,230,742 - 66,249,945 (+)NCBIUU_Cfam_GSD_1.0
C6H16orf95
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.161,996,457 - 2,013,709 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.262,088,631 - 2,101,643 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH16orf95
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1572,508,773 - 72,685,057 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660473,012,509 - 3,032,020 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040279659   ⟹   XP_040135593
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934926,090,141 - 26,096,838 (+)NCBI
RefSeq Acc Id: XM_040279660   ⟹   XP_040135594
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934926,090,151 - 26,096,825 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040135593 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135594 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000032020.1
GenBank Protein KAG3256719 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040135593   ⟸   XM_040279659
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040135594   ⟸   XM_040279660
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000033877 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000034048.1 UniProtKB/TrEMBL
InterPro DUF4568 UniProtKB/TrEMBL
NCBI Gene LOC101960606 ENTREZGENE
PANTHER PTHR14693 UniProtKB/TrEMBL
  RIKEN CDNA 1700018B08 GENE UniProtKB/TrEMBL
Pfam DUF4568 UniProtKB/TrEMBL
UniProt A0A287DEN1_ICTTR UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-07-13 CUNH16orf95  chromosome unknown C16orf95 homolog  LOC101960606  chromosome unknown open reading frame, human C16orf95  Symbol and/or name change 5135510 APPROVED