Mrgpre (MAS related GPR family member E) - Rat Genome Database

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Gene: Mrgpre (MAS related GPR family member E) Ictidomys tridecemlineatus
Analyze
Symbol: Mrgpre
Name: MAS related GPR family member E
RGD ID: 12586985
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN G protein-coupled receptor signaling pathway (inferred); ASSOCIATED WITH delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mas-related G-protein coupled receptor member E
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049473,401,521 - 3,406,868 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367941,346,350 - 1,347,939 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367941,346,350 - 1,347,291 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mrgpre
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049473,401,521 - 3,406,868 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367941,346,350 - 1,347,939 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367941,346,350 - 1,347,291 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRGPRE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38113,225,030 - 3,232,417 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl113,225,030 - 3,232,417 (-)EnsemblGRCh38hg38GRCh38
GRCh37113,246,260 - 3,253,647 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36113,205,617 - 3,210,192 (-)NCBINCBI36Build 36hg18NCBI36
Celera113,284,634 - 3,289,260 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
CHM1_1113,248,699 - 3,253,274 (-)NCBICHM1_1
T2T-CHM13v2.0113,316,000 - 3,323,368 (-)NCBIT2T-CHM13v2.0
Mrgpre
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397143,332,100 - 143,338,237 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7143,332,100 - 143,338,237 (-)EnsemblGRCm39 Ensembl
GRCm387143,778,363 - 143,784,500 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7143,778,363 - 143,784,500 (-)EnsemblGRCm38mm10GRCm38
MGSCv377150,964,268 - 150,970,405 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367143,587,755 - 143,593,708 (-)NCBIMGSCv36mm8
Celera7143,534,742 - 143,540,879 (-)NCBICelera
Cytogenetic Map7F5NCBI
cM Map788.31NCBI
Mrgpre
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81208,393,141 - 208,401,252 (-)NCBIGRCr8
mRatBN7.21198,963,786 - 198,969,862 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1198,963,787 - 198,969,521 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1207,345,752 - 207,346,681 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01214,427,692 - 214,428,621 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01207,101,860 - 207,102,789 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01216,969,464 - 216,973,936 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1216,970,254 - 216,971,183 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01223,825,104 - 223,830,426 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41204,171,075 - 204,172,004 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11204,324,527 - 204,325,457 (-)NCBI
Celera1196,529,375 - 196,530,304 (-)NCBICelera
Cytogenetic Map1q42NCBI
Mrgpre
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542214,976,730 - 14,982,295 (-)NCBIChiLan1.0ChiLan1.0
MRGPRE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v295,626,066 - 5,634,066 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1114,837,374 - 4,845,365 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0113,239,980 - 3,247,880 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1113,262,444 - 3,267,440 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl113,263,249 - 3,264,187 (-)Ensemblpanpan1.1panPan2
LOC102159152
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.122,329,261 - 2,330,710 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22776,673 - 777,698 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MRGPRE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.113,041,908 - 3,049,499 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl13,045,744 - 3,046,673 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038100,238,653 - 100,243,615 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrgpre
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476715,979,561 - 15,988,846 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476715,976,090 - 15,988,969 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000021060   ⟹   ENSSTOP00000019866
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049367941,346,350 - 1,347,939 (-)Ensembl
RefSeq Acc Id: XM_040283968   ⟹   XP_040139902
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049473,401,521 - 3,406,868 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040139902 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000019866.2
GenBank Protein KAG3284435 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040139902   ⟸   XM_040283968
- UniProtKB: I3N670 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000019866   ⟸   ENSSTOT00000021060
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000021328 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000021060.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  MRGPCRE UniProtKB/TrEMBL
  MRGPCRFAMILY UniProtKB/TrEMBL
NCBI Gene Mrgpre ENTREZGENE
PANTHER PTHR11334 UniProtKB/TrEMBL
  PTHR11334:SF26 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  MRGPCRE UniProtKB/TrEMBL
  MRGPCRFAMILY UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3N670 ENTREZGENE, UniProtKB/TrEMBL