Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1)

Gene: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1) Ictidomys tridecemlineatus

Analyze

Symbol:

Ndufs1

Name:

NADH:ubiquinone oxidoreductase core subunit S1

RGD ID:

12540070

Description:

ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (inferred); ATP metabolic process (inferred); ATP synthesis coupled electron transport (inferred); ASSOCIATED WITH cystic fibrosis (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN mitochondrial respiratory chain complex I (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; NADH:ubiquinone oxidoreductase core subunit S1, transcript variant X1; NADH:ubiquinone oxidoreductase core subunit S1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,922 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936631	2,499,062 - 2,538,801 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936631	2,503,353 - 2,538,957 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cystic fibrosis (ISO)

Disease Progression (ISO)

genetic disease (ISO)

hypertrophic cardiomyopathy (ISO)

inherited metabolic disorder (ISO)

Leigh disease (ISO)

megacolon (ISO)

MELAS syndrome (ISO)

mitochondrial complex I deficiency (ISO)

Myocardial Reperfusion Injury (ISO)

Neurodevelopmental Disorders (ISO)

nuclear type mitochondrial complex I deficiency 1 (ISO)

nuclear type mitochondrial complex I deficiency 5 (ISO)

Parkinson's disease (ISO)

primary pulmonary hypertension (ISO)

Stomach Neoplasms (ISO)

Subacute Necrotizing Encephalopathy of Leigh, Infantile (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic mitochondrial changes (IEA)

ATP metabolic process (IEA)

ATP synthesis coupled electron transport (IEA)

cellular respiration (IEA)

mitochondrial electron transport, NADH to ubiquinone (IEA)

mitochondrial respiratory chain complex I assembly (IEA)

reactive oxygen species metabolic process (IEA)

regulation of mitochondrial membrane potential (IEA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

mitochondrial inner membrane (IEA)

mitochondrial intermembrane space (IEA)

mitochondrial respiratory chain complex I (IEA,ISO)

mitochondrion (IEA)

Molecular Function

4 iron, 4 sulfur cluster binding (IEA)

electron transfer activity (IEA)

iron-sulfur cluster binding (IEA)

NADH dehydrogenase (ubiquinone) activity (IEA,ISO)

NADH dehydrogenase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Ndufs1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,922 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936631	2,499,062 - 2,538,801 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936631	2,503,353 - 2,538,957 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NDUFS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	206,114,817 - 206,159,444 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	206,114,817 - 206,159,509 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	206,979,541 - 207,024,168 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	206,696,048 - 206,732,432 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	206,813,308 - 206,849,693	NCBI
Celera	2	200,745,218 - 200,781,616 (-)	NCBI		Celera
Cytogenetic Map	2	q33.3	NCBI
HuRef	2	198,836,332 - 198,872,823 (-)	NCBI		HuRef
CHM1_1	2	206,994,334 - 207,030,799 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	206,596,710 - 206,641,337 (-)	NCBI		T2T-CHM13v2.0

Ndufs1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	63,182,751 - 63,215,981 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	63,182,755 - 63,215,992 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	63,143,592 - 63,176,822 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	63,143,596 - 63,176,833 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	63,190,166 - 63,223,396 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	63,077,874 - 63,110,985 (-)	NCBI		MGSCv36	mm8
Celera	1	63,653,959 - 63,687,212 (-)	NCBI		Celera
Cytogenetic Map	1	C2	NCBI
cM Map	1	32.29	NCBI

Ndufs1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	72,040,286 - 72,073,605 (-)	NCBI		GRCr8
mRatBN7.2	9	64,546,430 - 64,579,751 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	64,546,225 - 64,579,893 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	73,049,877 - 73,083,200 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	78,170,168 - 78,204,120 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	76,476,771 - 76,510,751 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	69,919,863 - 69,953,182 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	69,919,867 - 69,953,182 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	69,728,932 - 69,762,079 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	61,798,141 - 61,831,964 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	61,945,124 - 61,978,946 (-)	NCBI
Celera	9	61,964,379 - 61,997,783 (-)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI

Ndufs1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955457	8,838,216 - 8,883,481 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955457	8,838,216 - 8,879,059 (+)	NCBI	ChiLan1.0	ChiLan1.0

NDUFS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	108,735,668 - 108,773,190 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	108,751,932 - 108,788,172 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	93,363,092 - 93,399,326 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	211,493,021 - 211,528,496 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	211,493,021 - 211,528,496 (-)	Ensembl	panpan1.1		panPan2

NDUFS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	14,680,908 - 14,713,838 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	14,683,083 - 14,713,754 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	15,557,654 - 15,590,612 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	14,616,264 - 14,649,231 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	14,616,260 - 14,649,178 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	14,570,542 - 14,603,481 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	14,542,759 - 14,575,738 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	14,539,074 - 14,572,034 (-)	NCBI		UU_Cfam_GSD_1.0

NDUFS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	109,409,771 - 109,451,676 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	109,413,726 - 109,451,813 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	120,962,189 - 121,000,375 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NDUFS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	91,893,337 - 91,927,559 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	91,893,616 - 91,927,592 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	107,451,554 - 107,485,782 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ndufs1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	9,962,447 - 9,993,790 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624765	9,962,254 - 9,993,790 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005335103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013362784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000010256 ⟹ ENSSTOP00000009203

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936631	2,499,062 - 2,538,801 (-)	Ensembl

RefSeq Acc Id:

XM_005335103 ⟹ XP_005335160

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,919 (-)	NCBI
SpeTri2.0	NW_004936631	2,503,353 - 2,538,957 (-)	NCBI

Sequence:

show sequence

CTCTTGCTTTCCGTTCACCAGGCCCGGCTGACAGAATTAGCCGAGACCGCCATATTGGATAAGT
TGCCGGGTCTCCGAGGGGTCAGTGTGGGCCGGACACTCCAGCTGAGCAGCTGCAGCGGCTCCGG
GCAGAAGCAATATGTTAAGGATACCTGTTAGAAGGGCCTTAGTGGGCCTTTCTAAGTCTCCTAA
AGGATATGTTCGAACCACTGCCACAGCAGCAAGCAACTTGATTGAAGTATTCGTTGATGGTCAG
TCTGTCATGGTGGAACCAGGGACTACTGTCCTCCAAGCTTGTGAGAAGGTTGGCATGCAGATCC
CTCGATTTTGTTATCACGAAAGGTTATCTGTTGCTGGAAACTGCAGGATGTGCCTTGTTGAAAT
TGAGAAAGCTCCTAAGGTTGTAGCTGCTTGTGCTATGCCAGTAATGAAGGGTTGGAATATCCTG
ACAAACTCAGAAAAATCTAAGAAAGCCAGAGAAGGGGTGATGGAGTTCTTACTAGCCAATCACC
CATTGGACTGTCCCATTTGTGACCAGGGAGGCGAATGTGATCTGCAGGATCAGTCCATGATGTT
TGGAAGTGATAGGAGCCGATTTTTAGAGGGTAAACGGGCTGTGGAAGACAAGAACATCGGGCCA
TTGGTAAAGACCATCATGACTAGATGCATACAGTGTACTCGATGCATCAGGTTTGCAAGTGAGA
TTGCAGGAGTAGATGATCTGGGAACAACAGGCAGAGGAAATGATATGCAAGTTGGCACATATGT
TGAAAAAATGTTCATGTCTGAATTATCTGGGAATATCATTGATATCTGCCCTGTAGGTGCCCTA
ACCTCTAAGCCCTATGCCTTTACTGCACGGCCTTGGGAAACAAGAAAGACAGAATCCATTGATG
TAATGGATGCAGTTGGAAGTAATATTGTGGTTAGCACAAGAACTGGAGAGGTAATGAGAATTTT
GCCACGAATGCATGAGGACATCAATGAAGAATGGATCTCTGATAAAACCAGATTTGCCTATGAT
GGGCTAAAACGTCAAAGACTTATCGAGCCGATGGTCAGAAACGAAAAGGGACTTTTAAGCTATA
CTTCCTGGGAAGATGCACTGTCTCGTGTAGCTGGAATGTTGCAGAGTTTTCAAGGCAAGGATGT
GGCAGCAGTTGCAGGTGGCTTGGTAGATGCTGAAGCCCTAGTAGCTCTGAAAGATTTGCTTAAT
AGAGTGGACTCTGAAACCTTATGCACTGAAGAGGTCTTCCCCACTGCAGGAGCTGGCACAGATT
TGCGTTCCAATTATCTTCTTAATACTACAATTGCTGGTGTAGAAGAGGCAGATGTTGTCCTTCT
GGTTGGTACAAATCCACGTTTTGAGGCACCACTATTTAATGCTAGAATTCGAAAGAGCTGGCTT
CATAATGACTTGAAAGTAGCGCTTATAGGTAGTCCAGTGGACCTCACTTACCAATATGACCACC
TGGGAGACTCCCCTAAAATTCTGCAAGACATTGCTTCCGGTAGCCATTCATTCAGCCAGGTCTT
AAAGGATGCTAAAAAACCAATGGTGATTTTAGGCAGTTCTGCACTCCAAAGAAATGATGGGGCA
GCAATTCTTGCAGCTGTTTCTAGCATCGCACAAACCATTCGGGTGACTGGTGGTGTTGCTGATG
ATTGGAAAGTTATGAATATTCTTCATAGGGTTGCAAGCCAAGTAGCTGCTTTGGACCTAGGGTA
TAAACCTGGGGTAGAAGCAATTCGGAAGAACCCTCCCAAAGTGTTGTTTCTCCTGGGAGCTGAT
GGAGGTTGTATCACACGACAGGATTTACCAAAGGATTGTTTCATTGTATATCAAGGACATCATG
GTGATGTTGGAGCACCCATAGCTGATGTTATTCTCCCAGGAGCTGCTTACACAGAAAAGTCTGC
TACTTATGTAAATACTGAGGGTAGAGCTCAACAAACAAAAGTAGCAGTGACACCTCCTGGCTTG
GCACGAGAGGACTGGAAAATTATCAGAGCCCTTTCTGAGATTGCAGGCATTACTCTTCCATATG
ATACTCTGGATCAAGTGAGGAACAGATTGGAAGAAGTCTCTCCTAATCTTGTTCGATATGATGA
TGTGGAAGGAGCTAATTACTTTCAGCAAGCAAATGAGCTCTCCAAGCTTGTGAACCAGCAGCTT
CTTGCTGATCCCCTTGTTCCACCTCAATTAACTATAAAAGACTTCTATATGACAGATTCAATTA
GCAGAGCCTCACAGACAATGGCTAAATGTGTCAAAGCTGTCACAGAGGGTGCTCAAGCAGTAGA
GGAACCATCCATATGCTGAAATATCTATTACCAACCCAAATTTGCAACAAGTAGTGAATGGACA
ATTACATTAGAGTAATGCCT

hide sequence

RefSeq Acc Id:

XM_013362784 ⟹ XP_013218238

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,687 (-)	NCBI
SpeTri2.0	NW_004936631	2,503,370 - 2,538,945 (-)	NCBI

Sequence:

show sequence

GTTCACCAGGCCCGGCTGACAGAATTAGCCGAGACCGCCATATTGGATAAGTTGCCGGGTCTCC
GAGGGGTCAGTGTGGGCCGGACACTCCAGCTGAGCAGCTGCAGCGGCTCCGGGCAGAAGGTGAG
GTAGTGTTTAGGTGAGAAGGCTGAGTGATCTCGGCCAGAGTTTTAATTTTTGACGGGACTGCCT
TATGTGGCCCAGGCGACTCGTTCTCCTTTGCCCTTGACTGGGCACCGCCTCCCGCCCTGCCGCC
TTGGGAACCCCTGAGTTGCGGCAGCAATATGTTAAGGATACCTGTTAGAAGGGCCTTAGTGGGC
CTTTCTAAGTCTCCTAAAGGATATGTTCGAACCACTGCCACAGCAGCAAGCAACTTGATTGAAG
TATTCGTTGATGGTCAGTCTGTCATGGTGGAACCAGGGACTACTGTCCTCCAAGCTTGTGAGAA
GGTTGGCATGCAGATCCCTCGATTTTGTTATCACGAAAGGTTATCTGTTGCTGGAAACTGCAGG
ATGTGCCTTGTTGAAATTGAGAAAGCTCCTAAGGTTGTAGCTGCTTGTGCTATGCCAGTAATGA
AGGGTTGGAATATCCTGACAAACTCAGAAAAATCTAAGAAAGCCAGAGAAGGGGTGATGGAGTT
CTTACTAGCCAATCACCCATTGGACTGTCCCATTTGTGACCAGGGAGGCGAATGTGATCTGCAG
GATCAGTCCATGATGTTTGGAAGTGATAGGAGCCGATTTTTAGAGGGTAAACGGGCTGTGGAAG
ACAAGAACATCGGGCCATTGGTAAAGACCATCATGACTAGATGCATACAGTGTACTCGATGCAT
CAGGTTTGCAAGTGAGATTGCAGGAGTAGATGATCTGGGAACAACAGGCAGAGGAAATGATATG
CAAGTTGGCACATATGTTGAAAAAATGTTCATGTCTGAATTATCTGGGAATATCATTGATATCT
GCCCTGTAGGTGCCCTAACCTCTAAGCCCTATGCCTTTACTGCACGGCCTTGGGAAACAAGAAA
GACAGAATCCATTGATGTAATGGATGCAGTTGGAAGTAATATTGTGGTTAGCACAAGAACTGGA
GAGGTAATGAGAATTTTGCCACGAATGCATGAGGACATCAATGAAGAATGGATCTCTGATAAAA
CCAGATTTGCCTATGATGGGCTAAAACGTCAAAGACTTATCGAGCCGATGGTCAGAAACGAAAA
GGGACTTTTAAGCTATACTTCCTGGGAAGATGCACTGTCTCGTGTAGCTGGAATGTTGCAGAGT
TTTCAAGGCAAGGATGTGGCAGCAGTTGCAGGTGGCTTGGTAGATGCTGAAGCCCTAGTAGCTC
TGAAAGATTTGCTTAATAGAGTGGACTCTGAAACCTTATGCACTGAAGAGGTCTTCCCCACTGC
AGGAGCTGGCACAGATTTGCGTTCCAATTATCTTCTTAATACTACAATTGCTGGTGTAGAAGAG
GCAGATGTTGTCCTTCTGGTTGGTACAAATCCACGTTTTGAGGCACCACTATTTAATGCTAGAA
TTCGAAAGAGCTGGCTTCATAATGACTTGAAAGTAGCGCTTATAGGTAGTCCAGTGGACCTCAC
TTACCAATATGACCACCTGGGAGACTCCCCTAAAATTCTGCAAGACATTGCTTCCGGTAGCCAT
TCATTCAGCCAGGTCTTAAAGGATGCTAAAAAACCAATGGTGATTTTAGGCAGTTCTGCACTCC
AAAGAAATGATGGGGCAGCAATTCTTGCAGCTGTTTCTAGCATCGCACAAACCATTCGGGTGAC
TGGTGGTGTTGCTGATGATTGGAAAGTTATGAATATTCTTCATAGGGTTGCAAGCCAAGTAGCT
GCTTTGGACCTAGGGTATAAACCTGGGGTAGAAGCAATTCGGAAGAACCCTCCCAAAGTGTTGT
TTCTCCTGGGAGCTGATGGAGGTTGTATCACACGACAGGATTTACCAAAGGATTGTTTCATTGT
ATATCAAGGACATCATGGTGATGTTGGAGCACCCATAGCTGATGTTATTCTCCCAGGAGCTGCT
TACACAGAAAAGTCTGCTACTTATGTAAATACTGAGGGTAGAGCTCAACAAACAAAAGTAGCAG
TGACACCTCCTGGCTTGGCACGAGAGGACTGGAAAATTATCAGAGCCCTTTCTGAGATTGCAGG
CATTACTCTTCCATATGATACTCTGGATCAAGTGAGGAACAGATTGGAAGAAGTCTCTCCTAAT
CTTGTTCGATATGATGATGTGGAAGGAGCTAATTACTTTCAGCAAGCAAATGAGCTCTCCAAGC
TTGTGAACCAGCAGCTTCTTGCTGATCCCCTTGTTCCACCTCAATTAACTATAAAAGACTTCTA
TATGACAGATTCAATTAGCAGAGCCTCACAGACAATGGCTAAATGTGTCAAAGCTGTCACAGAG
GGTGCTCAAGCAGTAGAGGAACCATCCATATGCTGAAATATCTATTACCAACCCAAATTTGCAA
CAAGTAGTGAATGGACAATT

hide sequence

RefSeq Acc Id:

XM_040294786 ⟹ XP_040150720

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,920 (-)	NCBI

RefSeq Acc Id:

XM_040294787 ⟹ XP_040150721

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	162,868,082 - 162,903,922 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005335160	(Get FASTA)	NCBI Sequence Viewer
	XP_013218238	(Get FASTA)	NCBI Sequence Viewer
	XP_040150720	(Get FASTA)	NCBI Sequence Viewer
	XP_040150721	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000009203.2
GenBank Protein	KAG3275066	(Get FASTA)	NCBI Sequence Viewer
	KAG3275067	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005335160 ⟸ XM_005335103
- Peptide Label:	isoform X1
- UniProtKB:	I3MF52 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRIPVRRALVGLSKSPKGYVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFC YHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDC PICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGV DDLGTTGRGNDMQVGTYVEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDA VGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLIEPMVRNEKGLLSYTSWE DALSRVAGMLQSFQGKDVAAVAGGLVDAEALVALKDLLNRVDSETLCTEEVFPTAGAGTDLRSN YLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYQYDHLGDS PKILQDIASGSHSFSQVLKDAKKPMVILGSSALQRNDGAAILAAVSSIAQTIRVTGGVADDWKV MNILHRVASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIVYQGHHGDVG APIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLD QVRNRLEEVSPNLVRYDDVEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRAS QTMAKCVKAVTEGAQAVEEPSIC hide sequence

RefSeq Acc Id:	XP_013218238 ⟸ XM_013362784
- Peptide Label:	isoform X1
- UniProtKB:	I3MF52 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRIPVRRALVGLSKSPKGYVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFC YHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDC PICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGV DDLGTTGRGNDMQVGTYVEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDA VGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLIEPMVRNEKGLLSYTSWE DALSRVAGMLQSFQGKDVAAVAGGLVDAEALVALKDLLNRVDSETLCTEEVFPTAGAGTDLRSN YLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYQYDHLGDS PKILQDIASGSHSFSQVLKDAKKPMVILGSSALQRNDGAAILAAVSSIAQTIRVTGGVADDWKV MNILHRVASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIVYQGHHGDVG APIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLD QVRNRLEEVSPNLVRYDDVEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRAS QTMAKCVKAVTEGAQAVEEPSIC hide sequence

RefSeq Acc Id:	XP_040150721 ⟸ XM_040294787
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040150720 ⟸ XM_040294786
- Peptide Label:	isoform X1
- UniProtKB:	I3MF52 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000009203 ⟸ ENSSTOT00000010256

Protein Domains

2Fe-2S ferredoxin-type 4Fe-4S His(Cys)3-ligated-type 4Fe-4S Mo/W bis-MGD-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000010255	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000010256.3	UniProtKB/TrEMBL
Gene3D-CATH	3.10.20.740	UniProtKB/TrEMBL
	3.30.200.210	UniProtKB/TrEMBL
	3.30.70.20	UniProtKB/TrEMBL
	3.40.50.740	UniProtKB/TrEMBL
InterPro	2Fe-2S_ferredoxin-like_sf	UniProtKB/TrEMBL
	2Fe-2S_ferredoxin-type	UniProtKB/TrEMBL
	Mopterin_OxRdtase	UniProtKB/TrEMBL
	Mopterin_OxRdtase_4Fe-4S_dom	UniProtKB/TrEMBL
	NADH_UbQ_OxRdtase_75kDa_su_CS	UniProtKB/TrEMBL
	NADH_UbQ_OxRdtase_Gsu	UniProtKB/TrEMBL
	NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd	UniProtKB/TrEMBL
	NuoG_C	UniProtKB/TrEMBL
NCBI Gene	Ndufs1	ENTREZGENE
PANTHER	NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL	UniProtKB/TrEMBL
	RESPIRATORY NITRATE REDUCTASE	UniProtKB/TrEMBL
Pfam	Fer2_4	UniProtKB/TrEMBL
	Molybdopterin	UniProtKB/TrEMBL
	NADH-G_4Fe-4S_3	UniProtKB/TrEMBL
	NADH_dhqG_C	UniProtKB/TrEMBL
PROSITE	2FE2S_FER_2	UniProtKB/TrEMBL
	4FE4S_HC3	UniProtKB/TrEMBL
	4FE4S_MOW_BIS_MGD	UniProtKB/TrEMBL
	COMPLEX1_75K_1	UniProtKB/TrEMBL
	COMPLEX1_75K_2	UniProtKB/TrEMBL
	COMPLEX1_75K_3	UniProtKB/TrEMBL
SMART	NADH-G_4Fe-4S_3	UniProtKB/TrEMBL
Superfamily-SCOP	4Fe-4S ferredoxins	UniProtKB/TrEMBL
	Formate dehydrogenase/DMSO reductase, domains 1-3	UniProtKB/TrEMBL
	SSF54292	UniProtKB/TrEMBL
UniProt	I3MF52	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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