Sts (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404953 | 2,971,765 - 3,048,416 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936644 | 1,325,713 - 1,395,923 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936644 | 1,328,327 - 1,395,856 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
STS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | X | 7,147,290 - 7,354,641 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 7,147,237 - 7,804,358 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 7,065,331 - 7,272,682 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 7,147,472 - 7,282,682 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 6,997,232 - 7,132,416 | NCBI | | | | | Celera | X | 11,363,616 - 11,498,571 (+) | NCBI | | Celera | | | Cytogenetic Map | X | p22.31 | NCBI | | | | | HuRef | X | 4,994,733 - 5,130,162 (+) | NCBI | | HuRef | | | CHM1_1 | X | 7,168,567 - 7,303,666 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 6,701,075 - 6,908,316 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Sts (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | X | 168,856,332 - 169,015,037 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 168,909,030 - 169,014,924 (-) | Ensembl | | GRCm39 Ensembl | | | Cytogenetic Map | X | F5 | NCBI | | | | | cM Map | XY | 75.0 | NCBI | | | | |
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Sts (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 46,102,524 - 46,110,868 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 42,225,131 - 42,233,403 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 42,225,372 - 42,233,402 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 43,541,128 - 43,549,235 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 47,008,476 - 47,016,583 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 44,673,210 - 44,681,317 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 45,420,418 - 45,428,748 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 45,420,596 - 45,428,750 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 45,646,021 - 45,654,127 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 63,915,803 - 63,923,834 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 63,969,271 - 63,977,302 (+) | NCBI | | | | | Celera | X | 42,864,036 - 42,872,067 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
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Sts (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955499 | 5,180,214 - 5,345,221 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955499 | 5,180,451 - 5,347,862 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
STS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | X | 8,680,013 - 8,896,305 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 8,692,276 - 8,899,974 (+) | NCBI | | NHGRI_mPanPan1 | | | PanPan1.1 | X | 7,015,812 - 7,211,919 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 7,047,017 - 7,207,540 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
STS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 4,396,867 - 4,470,093 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 4,325,665 - 4,467,284 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 4,298,275 - 4,448,414 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 4,277,781 - 4,430,757 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 4,263,432 - 4,406,526 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 4,275,666 - 4,403,942 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 4,310,666 - 4,460,990 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 4,306,633 - 4,435,218 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
STS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 | X | 3,926,027 - 4,076,900 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa11.1 | Y | 2,747,102 - 2,828,322 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 4,052,271 - 4,255,004 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
STS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | X | 5,601,746 - 5,813,916 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 5,709,410 - 5,812,224 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666056 | 7,198,855 - 7,399,995 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sts (Heterocephalus glaber - naked mole-rat) |
|