Sts (steroid sulfatase) - Rat Genome Database

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Gene: Sts (steroid sulfatase) Ictidomys tridecemlineatus
Analyze
Symbol: Sts
Name: steroid sulfatase
RGD ID: 12508311
Description: ENCODES a protein that exhibits steryl-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN learning or memory (ortholog); positive regulation of cell population proliferation (ortholog); response to estrogen (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); amenorrhea (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: steroid sulfatase (microsomal), isozyme S; steryl-sulfatase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049532,971,765 - 3,048,416 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366441,325,713 - 1,395,923 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366441,328,327 - 1,395,856 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Sts
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049532,971,765 - 3,048,416 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366441,325,713 - 1,395,923 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366441,328,327 - 1,395,856 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X7,147,290 - 7,354,641 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX7,147,237 - 7,804,358 (+)EnsemblGRCh38hg38GRCh38
GRCh37X7,065,331 - 7,272,682 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X7,147,472 - 7,282,682 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X6,997,232 - 7,132,416NCBI
CeleraX11,363,616 - 11,498,571 (+)NCBICelera
Cytogenetic MapXp22.31NCBI
HuRefX4,994,733 - 5,130,162 (+)NCBIHuRef
CHM1_1X7,168,567 - 7,303,666 (+)NCBICHM1_1
T2T-CHM13v2.0X6,701,075 - 6,908,316 (+)NCBIT2T-CHM13v2.0
Sts
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X168,856,332 - 169,015,037 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX168,909,030 - 169,014,924 (-)EnsemblGRCm39 Ensembl
Cytogenetic MapXF5NCBI
cM MapXY75.0NCBI
Sts
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X46,102,524 - 46,110,868 (+)NCBIGRCr8
mRatBN7.2X42,225,131 - 42,233,403 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX42,225,372 - 42,233,402 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX43,541,128 - 43,549,235 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X47,008,476 - 47,016,583 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X44,673,210 - 44,681,317 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X45,420,418 - 45,428,748 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX45,420,596 - 45,428,750 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X45,646,021 - 45,654,127 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X63,915,803 - 63,923,834 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X63,969,271 - 63,977,302 (+)NCBI
CeleraX42,864,036 - 42,872,067 (+)NCBICelera
Cytogenetic MapXq21NCBI
Sts
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554995,180,214 - 5,345,221 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554995,180,451 - 5,347,862 (+)NCBIChiLan1.0ChiLan1.0
STS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X8,680,013 - 8,896,305 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X8,692,276 - 8,899,974 (+)NCBINHGRI_mPanPan1
PanPan1.1X7,015,812 - 7,211,919 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX7,047,017 - 7,207,540 (+)Ensemblpanpan1.1panPan2
STS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X4,396,867 - 4,470,093 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX4,325,665 - 4,467,284 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX4,298,275 - 4,448,414 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X4,277,781 - 4,430,757 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX4,263,432 - 4,406,526 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X4,275,666 - 4,403,942 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X4,310,666 - 4,460,990 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X4,306,633 - 4,435,218 (+)NCBIUU_Cfam_GSD_1.0
STS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1X3,926,027 - 4,076,900 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1Y2,747,102 - 2,828,322 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X4,052,271 - 4,255,004 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X5,601,746 - 5,813,916 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX5,709,410 - 5,812,224 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660567,198,855 - 7,399,995 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sts
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248344,853,045 - 4,978,111 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248344,805,556 - 4,975,264 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000029798   ⟹   ENSSTOP00000018524
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366441,325,713 - 1,395,923 (-)Ensembl
RefSeq Acc Id: XM_005335528   ⟹   XP_005335585
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049532,980,950 - 3,048,416 (+)NCBI
SpeTri2.0NW_0049366441,328,327 - 1,395,856 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040286894   ⟹   XP_040142828
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049532,971,765 - 3,048,416 (+)NCBI
RefSeq Acc Id: XM_040286895   ⟹   XP_040142829
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049532,979,096 - 3,048,416 (+)NCBI
RefSeq Acc Id: XM_040286896   ⟹   XP_040142830
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049532,972,230 - 3,048,416 (+)NCBI
RefSeq Acc Id: XM_040286897   ⟹   XP_040142831
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049533,016,724 - 3,048,416 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005335585 (Get FASTA)   NCBI Sequence Viewer  
  XP_040142828 (Get FASTA)   NCBI Sequence Viewer  
  XP_040142829 (Get FASTA)   NCBI Sequence Viewer  
  XP_040142830 (Get FASTA)   NCBI Sequence Viewer  
  XP_040142831 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000018524.1
RefSeq Acc Id: XP_005335585   ⟸   XM_005335528
- Peptide Label: isoform X3
- UniProtKB: I3N2C8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040142828   ⟸   XM_040286894
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040142830   ⟸   XM_040286896
- Peptide Label: isoform X4
RefSeq Acc Id: XP_040142829   ⟸   XM_040286895
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040142831   ⟸   XM_040286897
- Peptide Label: isoform X5
RefSeq Acc Id: ENSSTOP00000018524   ⟸   ENSSTOT00000029798
Protein Domains
Sulfatase N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000020247 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000029798.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1120.10 UniProtKB/TrEMBL
  3.40.720.10 UniProtKB/TrEMBL
  Helix hairpin bin UniProtKB/TrEMBL
InterPro Alkaline_phosphatase_core_sf UniProtKB/TrEMBL
  Sulfatase_CS UniProtKB/TrEMBL
  Sulfatase_N UniProtKB/TrEMBL
NCBI Gene Sts ENTREZGENE
PANTHER ARYLSULFATASE FAMILY MEMBER UniProtKB/TrEMBL
  STERYL-SULFATASE UniProtKB/TrEMBL
Pfam Sulfatase UniProtKB/TrEMBL
  Sulfatase_C UniProtKB/TrEMBL
PROSITE SULFATASE_1 UniProtKB/TrEMBL
  SULFATASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53649 UniProtKB/TrEMBL
UniProt I3N2C8 ENTREZGENE, UniProtKB/TrEMBL