Stac (SH3 and cysteine rich domain)

Gene: Stac (SH3 and cysteine rich domain) Ictidomys tridecemlineatus

Analyze

Symbol:

Stac

Name:

SH3 and cysteine rich domain

RGD ID:

12501354

Description:

ENCODES a protein that exhibits metal ion binding (inferred); transmembrane transporter binding (inferred); INVOLVED IN cellular response to heat (ortholog); muscle contraction (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); FOUND IN cytoplasmic side of plasma membrane (inferred); extrinsic component of cytoplasmic side of plasma membrane (inferred); sarcolemma (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

SH3 and cysteine rich domain, transcript variant X1; SH3 and cysteine rich domain, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	192,917,038 - 193,055,723 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	26,055,124 - 26,195,392 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	26,055,630 - 26,194,296 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

allergic contact dermatitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to heat (IEA,ISO)

muscle contraction (IEA,ISO)

positive regulation of protein localization to plasma membrane (IEA)

skeletal muscle contraction (IEA)

Cellular Component

cytoplasmic side of plasma membrane (IEA)

extrinsic component of cytoplasmic side of plasma membrane (IEA)

sarcolemma (IEA)

T-tubule (IEA)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

transmembrane transporter binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Stac
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	192,917,038 - 193,055,723 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	26,055,124 - 26,195,392 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	26,055,630 - 26,194,296 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STAC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	36,380,504 - 36,548,007 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	36,380,503 - 36,548,007 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	36,421,996 - 36,589,499 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	36,397,101 - 36,564,500 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	36,397,100 - 36,564,500	NCBI
Celera	3	36,365,008 - 36,532,250 (+)	NCBI		Celera
Cytogenetic Map	3	p22.3-p22.2	NCBI
HuRef	3	36,362,945 - 36,530,233 (+)	NCBI		HuRef
CHM1_1	3	36,371,843 - 36,539,723 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	36,381,995 - 36,549,211 (+)	NCBI		T2T-CHM13v2.0

Stac
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	111,386,476 - 111,519,673 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	111,390,505 - 111,519,416 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	111,561,437 - 111,690,588 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	111,561,437 - 111,690,348 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	111,463,938 - 111,592,720 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	111,406,250 - 111,535,105 (-)	NCBI		MGSCv36	mm8
Celera	9	111,283,101 - 111,415,949 (-)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	61.81	NCBI

Stac
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	120,409,165 - 120,531,394 (-)	NCBI		GRCr8
mRatBN7.2	8	111,530,800 - 111,653,228 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	111,530,800 - 111,654,008 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	8	119,820,664 - 119,941,867 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	119,821,901 - 119,889,661 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	119,168,403 - 119,287,773 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	115,961,972 - 116,076,186 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	115,981,426 - 116,112,914 (-)	NCBI
Celera	8	110,812,081 - 110,932,713 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Stac
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	3,325,199 - 3,471,742 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	3,325,199 - 3,471,748 (+)	NCBI	ChiLan1.0	ChiLan1.0

STAC
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	36,342,972 - 36,515,560 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	36,347,739 - 36,520,324 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	36,287,485 - 36,457,151 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	36,578,543 - 36,747,971 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	36,578,543 - 36,747,971 (+)	Ensembl	panpan1.1		panPan2

STAC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	6,372,337 - 6,524,334 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	6,372,257 - 6,519,748 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	6,412,243 - 6,563,487 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	6,656,701 - 6,808,405 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	6,656,464 - 6,808,400 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	6,476,557 - 6,627,887 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	6,619,492 - 6,770,889 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	6,609,913 - 6,761,385 (+)	NCBI		UU_Cfam_GSD_1.0

STAC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	21,429,653 - 21,549,314 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	21,429,570 - 21,548,784 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	23,304,681 - 23,428,311 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STAC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	80,742,955 - 80,906,053 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	80,801,748 - 80,906,044 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	54,220,717 - 54,389,378 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stac
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	14,360,738 - 14,539,934 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624788	14,360,682 - 14,540,035 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005317346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021732056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005735850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000005934 ⟹ ENSSTOP00000005308

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936473	26,055,124 - 26,195,392 (+)	Ensembl

RefSeq Acc Id:

XM_005317346 ⟹ XP_005317403

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	192,917,038 - 193,055,723 (+)	NCBI
SpeTri2.0	NW_004936473	26,055,630 - 26,194,296 (+)	NCBI

Sequence:

show sequence

GGTCGCCAGCGAGGTGGCCGCGGGCGCGGCGGGGCGGGGCTGGGCGCGCTCTCCCCCACGCCCG
CGGAAGTGCTGGGGAGGTGGGCAGGGCCGGGGCAGGGGCGAGGCCGGAGGAGGGCAAGTCGGCG
GCAGGGCGAGGATGGAAGTCCCCGGGACCCGGAGCTGAGCGACGGAGCGCGCGGCGGGCAGGCG
CGCCGGAGGAAGGCGAGCTTCGCTGTTCCTCCGGGAGCCCAACACCGTTCCCGCCCGGCCACGA
TGATCCCTCCAAGCGGCGCCCGCGAGGACGGCGTAGATGGGCTGCCCAAGGAGGCGGCGAGCGC
GGAGCAGCCGCCCTCTCCTGCATCCACCAGCAGCCAGGAATCCAAGCTCCAGAAACTAAAACGA
TCACTTTCTTTCAAGACCAAGAGTTTACGGAGCAAAAGTGCTGACAACTTCTTCCAGCGGACCA
ACAGCGACGCGAAGCTGCAAGCGGACATGCAGGCCGAGGTCAGCCCCAGCTCCAGCCCCTTGCC
TGCTCCGGGAAGCCTGGCGTCCACGCCCACCAGGGCTGGCCTGCACCCAGGCAGCGGCAAGGCT
CATGCCTTTCAGGAACACATTTTCAAGAAGCCCACTTTCTGCGACGTCTGCAACCACATGATAG
TGGGAACAAATGCCAAACACGGACTGCGCTGCAAAGCCTGTAAGATGAGCATCCACCACAGGTG
CACAGACGGCCTAGCACCCCAGCGGTGCATGGGCAAGCTGCCAAAGGGGTTTCGGCGTTACTAC
AGCTCCCCCTTGCTCATCCATGAACAGTTTGGATGCATTAAAGAAGTTATGCCCATTGCCTGTG
GCAATAAGGTGGACCCTGTCTACGAGACCCTTCGCTTTGGCACTTCCCTGGCCCAGAGAACGAA
GAAGGGCAGCTCTGGCAGTGGCTCTGATTCGCCTCACAGGACCTCTACTTCAGACCTTGTGGAG
GTTCCTGAAGAAACCGATGGGCCAGGAGACGGGTATGACCTAAGGAAACGCAGCAACAGTGTGT
TTACGTATCCAGAAAATGGCACTGACGATTTCAAAGACCAAGCAAAGAACATAAACCACCAGGG
ACCTCTTTCCAAAGACCCATTACAGATGAACACCTACGTTGCCTTGTACAAATTTGTACCACAG
GAAAATGAAGACTTGGAAATGAGGCCAGGAGACATAATTACTCTTCTAGAAGATTCCAATGAAG
ACTGGTGGAAAGGGAAAATTCAAGACAGGATCGGCTTCTTTCCAGCCAACTTTGTTCAGAGAGT
ACAACAAAACGAGAAGATTTTTAGATGTGTTAGAACCTTCATTGGGTGTAAGGAGCAGGGGCAG
ATAACACTGAAAGAGAACCAGATCTGTGTGACTTCAGAAGAAGAACAAGACGGCTTTATCAGAG
TGCTCAGTGGAAAGAAGAGAGGCCTTGTCCCCCTCGATGTCCTGGAAAATGTCTGATTGCTGAC
CCCTCCTCCTTGTGCAGCAGGCCAGCTCTGCTGCAGTGCCGTCTGCTCATCTCACTGTGTCCAC
CCAGAGGAGCTGTCGCACTGACCCGGCCCCCCCGGAAACAGGGAGACAAGACTGGAGGATCTGA
GACTGTGGAGCAGCAGCCACGCGGCAGAGGGCCCATCACAAAGCGCATCCTGGCTGCTAGAGGT
GGGGATGAGGCTGAGATTTGGCCAGCATACCTGGGGGGCAGCAGGGCCCTAGGCCACAGCTGCC
CCAGGACTCAGCTCCTTCCCTGCCCGGGTGGTGTAAGTCAACCGGCTGGAGGGTGTTCCAGTCT
ATGGTGTGGCCCCAGCATGAGGTTCAGTTCTGTGTAACCAAGTGTTGTTCTGGTTCCAGACCTT
TGTCCCCAGTACTGCCCAATCAGCATCATCACACTTCAGACTCCAAGCAGTCAGTCTCTCTGCG
GAGACTCCAGCTCCCAGCTGGTTACCAATAGAGGTAACCAGATCTGAGGCACAGATAGAAGCAG
CGAGGAGCATTGGGGATAGGGGGGACACAAATCCCTTATTTATTGAGGATGACACAGTCCTTTC
AGTTATGAAGTCCTTTCCCAAAGGATAGGGAGCTGGGAGAGAGAATGTGGAGAAAAGCATCCAT
TTTCATTTTATAGCCTCTATATTGGGGACAGCATTTTCCCCTTATGCCATCCTGTAGGAATCTA
TTTTGGAGGTGGAGCTCATCTTTCAGGGAACCAGGAACAGGGAGGGGAACCAATAACAGCATAT
TAGAAGAAATCGGAACGCATTTTTTCTTAGGTCAGTATATCATACCCCAGCAGGCATACAATAG
AAAGGAATCCTTAATGCTTCATCCCTCTGAAAGCAGAGGAATTGGGGGCCTATTTAGCATCATC
AAGGGGAGTCCAGAATCTCTATTACTCTGTACTTGTACTAATGTTTACAAGAATACAATATACT
GTGATGCCTTCCTCCTCAAGCCTCCTCCTAGCATTCACACTTGCATCCTAGAAATCATTCACAC
GGTTAAACTTCAATTCACAATGACCTTGGAATCAATGTCAGTTTGGTTTATTTTGTTACAGAGC
AATAAAATCATTAGAATAATTGGTTTTTAAAAGACTTAAGTGGATGCATCCTGTGCATGTAAGC
ATTATTTCTCAAACCAAAGCATCATTAGTCTCCATTTATTTCTTCTGCTACTGCTCAGCATGAA
GTTGGGAGCTGAGATGGGGTGGCTGCTGGTTTCACAGTAGTTTGGATGCCTTACTCTCATTTTA
AAGCCAGCATCCAGAGTTTTCTCCCTTTCTGAAACAACAGGCAAACCCAGGTGGATAGAGTCAA
GATGGATTCTTTGAGAGCCCACGCGGATAACACAACTGCCTTTCTGTAACAGTGAATGCCGAGT
ATCAATGCTCTTTGCCTCTAATCGAATTTTCCATATAATAAAGACAACACAGTGGCTGGAAGGA
GCAAGAAAA

hide sequence

RefSeq Acc Id:

XM_021732056 ⟹ XP_021587731

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	192,917,038 - 193,055,723 (+)	NCBI
SpeTri2.0	NW_004936473	26,055,630 - 26,194,296 (+)	NCBI

Sequence:

show sequence

GGTCGCCAGCGAGGTGGCCGCGGGCGCGGCGGGGCGGGGCTGGGCGCGCTCTCCCCCACGCCCG
CGGAAGTGCTGGGGAGGTGGGCAGGGCCGGGGCAGGGGCGAGGCCGGAGGAGGGCAAGTCGGCG
GCAGGGCGAGGATGGAAGTCCCCGGGACCCGGAGCTGAGCGACGGAGCGCGCGGCGGGCAGGCG
CGCCGGAGGAAGGCGAGCTTCGCTGTTCCTCCGGGAGCCCAACACCGTTCCCGCCCGGCCACGA
TGATCCCTCCAAGCGGCGCCCGCGAGGACGGCGTAGATGGGCTGCCCAAGGAGGCGGCGAGCGC
GGAGCAGCCGCCCTCTCCTGCATCCACCAGCAGCCAGGAATCCAAGACCAAGAGTTTACGGAGC
AAAAGTGCTGACAACTTCTTCCAGCGGACCAACAGCGACGCGAAGCTGCAAGCGGACATGCAGG
CCGAGGTCAGCCCCAGCTCCAGCCCCTTGCCTGCTCCGGGAAGCCTGGCGTCCACGCCCACCAG
GGCTGGCCTGCACCCAGGCAGCGGCAAGGCTCATGCCTTTCAGGAACACATTTTCAAGAAGCCC
ACTTTCTGCGACGTCTGCAACCACATGATAGTGGGAACAAATGCCAAACACGGACTGCGCTGCA
AAGCCTGTAAGATGAGCATCCACCACAGGTGCACAGACGGCCTAGCACCCCAGCGGTGCATGGG
CAAGCTGCCAAAGGGGTTTCGGCGTTACTACAGCTCCCCCTTGCTCATCCATGAACAGTTTGGA
TGCATTAAAGAAGTTATGCCCATTGCCTGTGGCAATAAGGTGGACCCTGTCTACGAGACCCTTC
GCTTTGGCACTTCCCTGGCCCAGAGAACGAAGAAGGGCAGCTCTGGCAGTGGCTCTGATTCGCC
TCACAGGACCTCTACTTCAGACCTTGTGGAGGTTCCTGAAGAAACCGATGGGCCAGGAGACGGG
TATGACCTAAGGAAACGCAGCAACAGTGTGTTTACGTATCCAGAAAATGGCACTGACGATTTCA
AAGACCAAGCAAAGAACATAAACCACCAGGGACCTCTTTCCAAAGACCCATTACAGATGAACAC
CTACGTTGCCTTGTACAAATTTGTACCACAGGAAAATGAAGACTTGGAAATGAGGCCAGGAGAC
ATAATTACTCTTCTAGAAGATTCCAATGAAGACTGGTGGAAAGGGAAAATTCAAGACAGGATCG
GCTTCTTTCCAGCCAACTTTGTTCAGAGAGTACAACAAAACGAGAAGATTTTTAGATGTGTTAG
AACCTTCATTGGGTGTAAGGAGCAGGGGCAGATAACACTGAAAGAGAACCAGATCTGTGTGACT
TCAGAAGAAGAACAAGACGGCTTTATCAGAGTGCTCAGTGGAAAGAAGAGAGGCCTTGTCCCCC
TCGATGTCCTGGAAAATGTCTGATTGCTGACCCCTCCTCCTTGTGCAGCAGGCCAGCTCTGCTG
CAGTGCCGTCTGCTCATCTCACTGTGTCCACCCAGAGGAGCTGTCGCACTGACCCGGCCCCCCC
GGAAACAGGGAGACAAGACTGGAGGATCTGAGACTGTGGAGCAGCAGCCACGCGGCAGAGGGCC
CATCACAAAGCGCATCCTGGCTGCTAGAGGTGGGGATGAGGCTGAGATTTGGCCAGCATACCTG
GGGGGCAGCAGGGCCCTAGGCCACAGCTGCCCCAGGACTCAGCTCCTTCCCTGCCCGGGTGGTG
TAAGTCAACCGGCTGGAGGGTGTTCCAGTCTATGGTGTGGCCCCAGCATGAGGTTCAGTTCTGT
GTAACCAAGTGTTGTTCTGGTTCCAGACCTTTGTCCCCAGTACTGCCCAATCAGCATCATCACA
CTTCAGACTCCAAGCAGTCAGTCTCTCTGCGGAGACTCCAGCTCCCAGCTGGTTACCAATAGAG
GTAACCAGATCTGAGGCACAGATAGAAGCAGCGAGGAGCATTGGGGATAGGGGGGACACAAATC
CCTTATTTATTGAGGATGACACAGTCCTTTCAGTTATGAAGTCCTTTCCCAAAGGATAGGGAGC
TGGGAGAGAGAATGTGGAGAAAAGCATCCATTTTCATTTTATAGCCTCTATATTGGGGACAGCA
TTTTCCCCTTATGCCATCCTGTAGGAATCTATTTTGGAGGTGGAGCTCATCTTTCAGGGAACCA
GGAACAGGGAGGGGAACCAATAACAGCATATTAGAAGAAATCGGAACGCATTTTTTCTTAGGTC
AGTATATCATACCCCAGCAGGCATACAATAGAAAGGAATCCTTAATGCTTCATCCCTCTGAAAG
CAGAGGAATTGGGGGCCTATTTAGCATCATCAAGGGGAGTCCAGAATCTCTATTACTCTGTACT
TGTACTAATGTTTACAAGAATACAATATACTGTGATGCCTTCCTCCTCAAGCCTCCTCCTAGCA
TTCACACTTGCATCCTAGAAATCATTCACACGGTTAAACTTCAATTCACAATGACCTTGGAATC
AATGTCAGTTTGGTTTATTTTGTTACAGAGCAATAAAATCATTAGAATAATTGGTTTTTAAAAG
ACTTAAGTGGATGCATCCTGTGCATGTAAGCATTATTTCTCAAACCAAAGCATCATTAGTCTCC
ATTTATTTCTTCTGCTACTGCTCAGCATGAAGTTGGGAGCTGAGATGGGGTGGCTGCTGGTTTC
ACAGTAGTTTGGATGCCTTACTCTCATTTTAAAGCCAGCATCCAGAGTTTTCTCCCTTTCTGAA
ACAACAGGCAAACCCAGGTGGATAGAGTCAAGATGGATTCTTTGAGAGCCCACGCGGATAACAC
AACTGCCTTTCTGTAACAGTGAATGCCGAGTATCAATGCTCTTTGCCTCTAATCGAATTTTCCA
TATAATAAAGACAACACAGTGGCTGGAAGGAGCAAGAAAA

hide sequence

RefSeq Acc Id:

XR_005735850

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	192,917,038 - 193,055,723 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005317403	(Get FASTA)	NCBI Sequence Viewer
	XP_021587731	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000005308.3
GenBank Protein	KAG3279579	(Get FASTA)	NCBI Sequence Viewer
	KAG3279580	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005317403 ⟸ XM_005317346
- Peptide Label:	isoform X1
- UniProtKB:	I3M6Z2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIPPSGAREDGVDGLPKEAASAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNFFQRT NSDAKLQADMQAEVSPSSSPLPAPGSLASTPTRAGLHPGSGKAHAFQEHIFKKPTFCDVCNHMI VGTNAKHGLRCKACKMSIHHRCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQFGCIKEVMPIAC GNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEETDGPGDGYDLRKRSNSV FTYPENGTDDFKDQAKNINHQGPLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNE DWWKGKIQDRIGFFPANFVQRVQQNEKIFRCVRTFIGCKEQGQITLKENQICVTSEEEQDGFIR VLSGKKRGLVPLDVLENV hide sequence

RefSeq Acc Id:

XP_021587731 ⟸ XM_021732056

- Peptide Label:

isoform X2

- Sequence:

show sequence

MIPPSGAREDGVDGLPKEAASAEQPPSPASTSSQESKTKSLRSKSADNFFQRTNSDAKLQADMQ
AEVSPSSSPLPAPGSLASTPTRAGLHPGSGKAHAFQEHIFKKPTFCDVCNHMIVGTNAKHGLRC
KACKMSIHHRCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQFGCIKEVMPIACGNKVDPVYETL
RFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEETDGPGDGYDLRKRSNSVFTYPENGTDDF
KDQAKNINHQGPLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRI
GFFPANFVQRVQQNEKIFRCVRTFIGCKEQGQITLKENQICVTSEEEQDGFIRVLSGKKRGLVP
LDVLENV

hide sequence

RefSeq Acc Id:

ENSSTOP00000005308 ⟸ ENSSTOT00000005934

Protein Domains

Phorbol-ester/DAG-type SH3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000005934	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000005934.3	UniProtKB/TrEMBL
Gene3D-CATH	3.30.60.20	UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/TrEMBL
InterPro	C1-like_sf	UniProtKB/TrEMBL
	PE/DAG-bd	UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/TrEMBL
	SH3_domain	UniProtKB/TrEMBL
	STAC1/2/3	UniProtKB/TrEMBL
	STAC1_SH3	UniProtKB/TrEMBL
NCBI Gene	Stac	ENTREZGENE
PANTHER	PTHR15135	UniProtKB/TrEMBL
	PTHR15135:SF3	UniProtKB/TrEMBL
Pfam	C1_1	UniProtKB/TrEMBL
	SH3_1	UniProtKB/TrEMBL
	SH3_2	UniProtKB/TrEMBL
	STAC2_u1	UniProtKB/TrEMBL
PRINTS	SH3DOMAIN	UniProtKB/TrEMBL
	SPECTRNALPHA	UniProtKB/TrEMBL
PROSITE	SH3	UniProtKB/TrEMBL
	ZF_DAG_PE_1	UniProtKB/TrEMBL
	ZF_DAG_PE_2	UniProtKB/TrEMBL
SMART	SH3	UniProtKB/TrEMBL
	SM00109	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50044	UniProtKB/TrEMBL
	SSF57889	UniProtKB/TrEMBL
UniProt	I3M6Z2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD