Ppcs (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 58,042,297 - 58,046,179 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 23,867,347 - 23,871,223 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 23,867,117 - 23,870,832 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PPCS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 42,456,341 - 42,473,417 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 42,456,117 - 42,473,385 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 42,922,012 - 42,939,088 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 42,694,760 - 42,698,673 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 41,204,112 - 41,208,024 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p34.2 | NCBI | | | | | HuRef | 1 | 41,042,280 - 41,046,192 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 43,039,012 - 43,042,924 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 42,326,703 - 42,343,779 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Ppcs (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 119,275,724 - 119,279,673 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 119,275,727 - 119,279,617 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 119,418,527 - 119,422,440 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 119,418,530 - 119,422,420 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 119,091,138 - 119,095,025 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 118,916,465 - 118,920,352 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 118,149,698 - 118,153,626 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | D2.1 | NCBI | | | | | cM Map | 4 | 55.38 | NCBI | | | | |
|
Ppcs (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 138,308,394 - 138,312,047 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 133,023,077 - 133,026,899 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 133,023,121 - 133,026,933 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 135,751,606 - 135,755,020 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 137,508,062 - 137,511,476 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 137,528,672 - 137,532,086 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 138,466,298 - 138,470,108 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 138,466,293 - 138,470,096 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 142,276,595 - 142,279,846 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 140,008,434 - 140,012,295 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 140,013,626 - 140,017,910 (-) | NCBI | | | | | Celera | 5 | 131,547,070 - 131,550,484 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
|
Ppcs (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955537 | 2,080,865 - 2,085,003 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955537 | 2,080,865 - 2,084,199 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PPCS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 184,338,463 - 184,355,237 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 183,480,108 - 183,497,012 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 41,756,403 - 41,773,430 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 43,136,337 - 43,153,583 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 43,136,720 - 43,140,620 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
PPCS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 15 | 813,435 - 817,732 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 813,870 - 816,825 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 1,068,253 - 1,071,661 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 895,016 - 898,424 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 895,030 - 898,423 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 804,254 - 807,662 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 865,779 - 869,187 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 880,894 - 884,302 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PPCS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 168,870,869 - 168,876,779 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 168,833,945 - 168,876,831 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 156,392,581 - 156,397,630 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PPCS (Chlorocebus sabaeus - green monkey) |
|
Ppcs (Heterocephalus glaber - naked mole-rat) |
|