Ccdc24 (coiled-coil domain containing 24)

Gene: Ccdc24 (coiled-coil domain containing 24) Ictidomys tridecemlineatus

Analyze

Symbol:

Ccdc24

Name:

coiled-coil domain containing 24

RGD ID:

12483372

Description:

INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coiled-coil domain containing 24, transcript variant X1; coiled-coil domain containing 24, transcript variant X2; coiled-coil domain containing 24, transcript variant X3; coiled-coil domain containing 24, transcript variant X4; coiled-coil domain containing 24, transcript variant X5; coiled-coil domain containing 24, transcript variant X6; coiled-coil domain containing 24, transcript variant X7; coiled-coil domain containing 24, transcript variant X8; coiled-coil domain-containing protein 24

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	25,309,054 - 25,312,215 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	25,308,459 - 25,313,073 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

blastocyst hatching (IEA,ISO)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

Ccdc24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	25,309,054 - 25,312,215 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	25,308,459 - 25,313,073 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC24
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	43,991,599 - 43,996,528 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	43,991,359 - 43,996,528 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	44,457,271 - 44,462,200 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	44,229,867 - 44,234,787 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	42,740,817 - 42,745,738 (+)	NCBI		Celera
Cytogenetic Map	1	p34.1	NCBI
HuRef	1	42,572,785 - 42,577,710 (+)	NCBI		HuRef
CHM1_1	1	44,573,446 - 44,578,367 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	43,862,686 - 43,867,620 (+)	NCBI		T2T-CHM13v2.0

Ccdc24
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	117,725,946 - 117,729,808 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	117,723,721 - 117,729,754 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	117,869,255 - 117,872,661 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	117,866,524 - 117,872,557 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	117,541,865 - 117,545,075 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	4	116,584,369 - 116,587,576 (-)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	53.69	NCBI

Ccdc24
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	136,684,206 - 136,697,855 (-)	NCBI		GRCr8
mRatBN7.2	5	131,398,766 - 131,412,395 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	131,408,143 - 131,412,029 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	134,113,739 - 134,117,063 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	135,868,356 - 135,871,680 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	135,890,782 - 135,894,106 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	136,691,655 - 136,707,197 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	136,703,674 - 136,706,998 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	140,482,792 - 140,496,241 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	138,334,870 - 138,338,194 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	129,957,083 - 129,960,407 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Ccdc24
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955537	3,517,132 - 3,520,219 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955537	3,516,502 - 3,520,559 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC24
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	182,813,106 - 182,818,339 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	181,954,438 - 181,959,671 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	43,293,426 - 43,298,371 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	44,664,832 - 44,669,409 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	44,664,832 - 44,669,409 (+)	Ensembl	panpan1.1		panPan2

CCDC24
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	16,267,994 - 16,269,499 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	16,389,000 - 16,392,358 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	16,422,564 - 16,425,975 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	16,422,955 - 16,425,929 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	16,221,496 - 16,224,852 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	16,290,499 - 16,293,840 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	16,363,229 - 16,366,586 (-)	NCBI		UU_Cfam_GSD_1.0

CCDC24
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	167,301,565 - 167,305,255 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	167,301,560 - 167,305,471 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CCDC24
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	88,809,684 - 88,814,417 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	88,806,991 - 88,814,225 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	28,113,284 - 28,117,954 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc24
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624892	3,271,149 - 3,274,730 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624892	3,270,816 - 3,275,074 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021719867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000004435 ⟹ ENSSTOP00000003978

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936474	25,309,054 - 25,312,215 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000034757 ⟹ ENSSTOP00000028358

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936474	25,309,384 - 25,312,215 (+)	Ensembl

RefSeq Acc Id:

XM_021719870 ⟹ XP_021575545

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI
SpeTri2.0	NW_004936474	25,308,459 - 25,313,073 (+)	NCBI

Sequence:

show sequence

GGTTTCTTCAAACGCAGGGACTAATAACCACACTGCCCTAGACAGAAAAAAGTTTACCTTGTCT
CTGCCCCACTGCCCCTGAGTAACATACTCAGTGGGACCAGATTTCCCAGTTGTTCAACTGCCTA
GAGGCGGGGAGGTGCTGGACGAGCCCCTAGAACTTGGGGGCGGGTTCTGGGGAGCTTTCTCCCC
CAAGCGCCACGCCCCCTATCTCTCGGGGACCAACAGCTCGCGGGTGCGGGAAGCGGGAGGGCAG
GAGCTGGGCGGGGCCTCTGGGGCCTGGGTTTGCGCGCGGTTTCCCGGGTGACTGCTGTGCGGAA
GAGGCGGGGCTGCCGGGGCCCCCCCCCTTCCCCGCTGCCTGGCTCCCCCAGGCGGTGGCCCCAG
AGGGTCTGCCAGAAGCGCGGCTTAAGAAACGGCGCCAGAGACCGGTGTGGCGGACTGGGCCCGA
GCTGGGGACGGCGGCGCGGGCGCCATGCCCCGGGGTTCCCTGTCGCTGTGGGAGCTGGTGGAGG
AGCATGTTCCACTCCCGGAGCAGCCTGAAGTGAAGAGGATTCTGGGGGAGGCGGTGGTAGATCT
GAGCCTGGAGCTACGAGCGGAGGTGGGGAGTGGGAAGGTGGCGATGCTAGAGGTACTGCTGCAA
GAGGCTCGATCTTCCCAAGCCTCAGGCTGTCACCCCATCTCTGACCCTTGCTCCCTTCTGGCAC
CTCCGCCACTCCTGAGGGACCTCATGCGCCAGGAACTCCAGCAGCTTCTCCAAAGGCTCCGAGA
CAAGGCCATCTGCGAGGGCAGGGACCCGGCCCAGGCTTGGGCTGCATATAGCCCCAAGGTTATT
CGCTTTGCCTTGGAGGAGCCCAGGTGTGACTTGCCAGAACAGGAGATATCCCAGATGAGAGCTG
GTGAACACAGCAGCAGTCACAGGGACCTCAGTTTCATCAAGGATCAGCTGAATATGTCCAACAT
TGACCAAGTTGCTGGATACCTGAGAGGCCTCCTGGAGGAGGAGTGTCGCACCTTGGAGAGGGAG
ATTTCCACCTTGCAGTGCTGCCTGGAAGCAGAGCATACGCAGGCTCACCAGCCCTCTGAAGCAA
CCCTGGAGCCCACCCTGGCAGAGCTAAAGGAGCAGAAAAAGGCCATGGAAAAGGAGCTTCAGGC
CTCTTTGGGAACTTCCTGCATCTTTGCCAAATACAGCAGCCATTGGAGTCATCCATTCAGGACC
TTAGATCCTTTCCTCCCCTCCATGGAGCTGATGGAGTTTGGACTGGGCCTCTTCAAGGCCACCT
ACCTGTACCTCCTTTGGAGCGCTGCCCCCAGTCTCAAGGCTGGGCCTCCAGCTGCCGCTGGGGA
CGGCAGCTTCGGTGCGGCCCCAGGGAAAGACCAGCTTCCACACCAATGTCCACTGCAGCACCCC
AGGCCCCAAGCTGAAGGGCCAACCACAAAGCAGACTTCTGCTTCTGTCAGAACTTGCCCCTTCT
ACAATGCCACCTTAGTTGCCATGGCCCTGCCAGCTTCAGGTCTCATCTTGGATGAGTTCTTGCC
AAGACCCTAAGGCTGTTTGTCTGTCTAGCCCTTTTCCCACTCCCTTGCCAGGTCCCTGGTATTC
ACGGTAAGTTGCCAGACATCTATCCTAGCTGTCAAATCCTTTGGCCTTTCTCCTCCCAGGCCTC
CACAAAGGCTTGGCCAACAGAGGTCCCATCCCAGTTCTGACTCTTGTCCCCCAGGGGACCCAGA
CAAAGCACAGCAGCAGTTCAGAGACAGGAATAGAAATTTCATTAAAATCTATGGACTTTAAAAT
CCTAGTGGTGCACGATGGGCAGGGGCAGGCAGTGCACCATTATTGCTACAAAGGATTAGACACG
GCTTGACTGGGGCTGTCACTGCACAGAGGGCACGGAGGACGGACAAATGGACACTGCAGGCCTT
GAGAGGAGCTTTGGCTCCAGAGGAGGATGGAACATGTGGGCTGGGGCCATTTGGCACATGAATG
AGGGCAACACGTCTGGGAAGACTGGGCTTTTAGCCTGGTGGAGGGAGGGCAAAGGGCTGTCGTG
CAGGGTCTCCTTCCCAAGGGCTCTGAGCTCACACCTCCTGCTGAGCAGCCTCCACCCCTGCCCT
CCTGAAACAAGTGCTTTGGGCAGGCTGCTGGGTCACAGCCTCTGCTGGGTGGGCCCCATATCCA
GGGCTGGAATGAGGGACACAGACCCTGGAGCAGCTGAGTGAGGTGCAAGCAGGCCTGGAAGACA
GATTGGACCCAAGGCTGGGGGCAGGGGTAGCAACCACAGA

hide sequence

RefSeq Acc Id:

XM_021719880 ⟹ XP_021575555

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI
SpeTri2.0	NW_004936474	25,308,459 - 25,313,073 (+)	NCBI

Sequence:

show sequence

GGTTTCTTCAAACGCAGGGACTAATAACCACACTGCCCTAGACAGAAAAAAGTTTACCTTGTCT
CTGCCCCACTGCCCCTGAGTAACATACTCAGTGGGACCAGATTTCCCAGTTGTTCAACTGCCTA
GAGGCGGGGAGGTGCTGGACGAGCCCCTAGAACTTGGGGGCGGGTTCTGGGGAGCTTTCTCCCC
CAAGCGCCACGCCCCCTATCTCTCGGGGACCAACAGCTCGCGGGTGCGGGAAGCGGGAGGGCAG
GAGCTGGGCGGGGCCTCTGGGGCCTGGGTTTGCGCGCGGTTTCCCGGGTGACTGCTGTGCGGAA
GAGGCGGGGCTGCCGGGGCCCCCCCCCTTCCCCGCTGCCTGGCTCCCCCAGGCGGTGGCCCCAG
AGGGTCTGCCAGAAGCGCGGCTTAAGAAACGGCGCCAGAGACCGGTGTGGCGGACTGGGCCCGA
GCTGGGGACGGCGGCGCGGGCGCCATGCCCCGGGGTTCCCTGTCGCTGTGGGAGCTGGTGGAGG
AGCATGTTCCACTCCCGGAGCAGCCTGAAGTGAAGAGGATTCTGGGGGAGGCGGTGGTAGATCT
GAGCCTGGAGCTACGAGCGGAGGTGGCGATGCTAGAGGTACTGCTGCAAGAGGCTCGATCTTCC
CAAGCCTCAGGCTGTCACCCCATCTCTGACCCTTGCTCCCTTCTGGCACCTCCGCCACTCCTGA
GGGACCTCATGCGCCAGGAACTCCAGCAGCTTCTCCAAAGGCTCCGAGACAAGGCCATCTGCGA
GGGCAGGGACCCGGCCCAGGCTTGGGCTGCATATAGCCCCAAGGTTATTCGCTTTGCCTTGGAG
GAGCCCAGGTGTGACTTGCCAGAACAGGAGATATCCCAGATGAGAGCTGGTGAACACAGCAGCA
GTCACAGGGACCTCAGTTTCATCAAGGATCAGCTGAATATGTCCAACATTGACCAAGTTGCTGG
ATACCTGAGAGGCCTCCTGGAGGAGGAGTGTCGCACCTTGGAGAGGGAGATTTCCACCTTGCAG
TGCTGCCTGGAAGCAGAGCATACGCAGGCTCACCAGCCCTCTGAAGCAACCCTGGAGCCCACCC
TGGCAGAGCTAAAGGAGCAGAAAAAGGCCATGGAAAAGGAGCTTCAGGCCTCTTTGGGAACTTC
CTGCATCTTTGCCAAATACAGCAGCCATTGGAGTCATCCATTCAGGACCTTAGATCCTTTCCTC
CCCTCCATGGAGCTGATGGAGTTTGGACTGGGCCTCTTCAAGGCCACCTACCTGTACCTCCTTT
GGAGCGCTGCCCCCAGTCTCAAGGCTGGGCCTCCAGCTGCCGCTGGGGACGGCAGCTTCGGTGC
GGCCCCAGGGAAAGACCAGCTTCCACACCAATGTCCACTGCAGCACCCCAGGCCCCAAGCTGAA
GGGCCAACCACAAAGCAGACTTCTGCTTCTGTCAGAACTTGCCCCTTCTACAATGCCACCTTAG
TTGCCATGGCCCTGCCAGCTTCAGGTCTCATCTTGGATGAGTTCTTGCCAAGACCCTAAGGCTG
TTTGTCTGTCTAGCCCTTTTCCCACTCCCTTGCCAGGTCCCTGGTATTCACGGTAAGTTGCCAG
ACATCTATCCTAGCTGTCAAATCCTTTGGCCTTTCTCCTCCCAGGCCTCCACAAAGGCTTGGCC
AACAGAGGTCCCATCCCAGTTCTGACTCTTGTCCCCCAGGGGACCCAGACAAAGCACAGCAGCA
GTTCAGAGACAGGAATAGAAATTTCATTAAAATCTATGGACTTTAAAATCCTAGTGGTGCACGA
TGGGCAGGGGCAGGCAGTGCACCATTATTGCTACAAAGGATTAGACACGGCTTGACTGGGGCTG
TCACTGCACAGAGGGCACGGAGGACGGACAAATGGACACTGCAGGCCTTGAGAGGAGCTTTGGC
TCCAGAGGAGGATGGAACATGTGGGCTGGGGCCATTTGGCACATGAATGAGGGCAACACGTCTG
GGAAGACTGGGCTTTTAGCCTGGTGGAGGGAGGGCAAAGGGCTGTCGTGCAGGGTCTCCTTCCC
AAGGGCTCTGAGCTCACACCTCCTGCTGAGCAGCCTCCACCCCTGCCCTCCTGAAACAAGTGCT
TTGGGCAGGCTGCTGGGTCACAGCCTCTGCTGGGTGGGCCCCATATCCAGGGCTGGAATGAGGG
ACACAGACCCTGGAGCAGCTGAGTGAGGTGCAAGCAGGCCTGGAAGACAGATTGGACCCAAGGC
TGGGGGCAGGGGTAGCAACCACAGA

hide sequence

RefSeq Acc Id:

XM_040288525 ⟹ XP_040144459

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI

RefSeq Acc Id:

XM_040288526 ⟹ XP_040144460

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI

RefSeq Acc Id:

XM_040288527 ⟹ XP_040144461

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	59,483,733 - 59,488,291 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_021575545	(Get FASTA)	NCBI Sequence Viewer
	XP_021575555	(Get FASTA)	NCBI Sequence Viewer
	XP_040144459	(Get FASTA)	NCBI Sequence Viewer
	XP_040144460	(Get FASTA)	NCBI Sequence Viewer
	XP_040144461	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000003978.3
	ENSSTOP00000028358.1
GenBank Protein	KAG3282985	(Get FASTA)	NCBI Sequence Viewer
	KAG3282986	(Get FASTA)	NCBI Sequence Viewer
	KAG3282987	(Get FASTA)	NCBI Sequence Viewer
	KAG3282988	(Get FASTA)	NCBI Sequence Viewer
	KAG3282989	(Get FASTA)	NCBI Sequence Viewer
	KAG3282990	(Get FASTA)	NCBI Sequence Viewer
	KAG3282991	(Get FASTA)	NCBI Sequence Viewer
	KAG3282992	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_021575545 ⟸ XM_021719870

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPRGSLSLWELVEEHVPLPEQPEVKRILGEAVVDLSLELRAEVGSGKVAMLEVLLQEARSSQAS
GCHPISDPCSLLAPPPLLRDLMRQELQQLLQRLRDKAICEGRDPAQAWAAYSPKVIRFALEEPR
CDLPEQEISQMRAGEHSSSHRDLSFIKDQLNMSNIDQVAGYLRGLLEEECRTLEREISTLQCCL
EAEHTQAHQPSEATLEPTLAELKEQKKAMEKELQASLGTSCIFAKYSSHWSHPFRTLDPFLPSM
ELMEFGLGLFKATYLYLLWSAAPSLKAGPPAAAGDGSFGAAPGKDQLPHQCPLQHPRPQAEGPT
TKQTSASVRTCPFYNATLVAMALPASGLILDEFLPRP

hide sequence

RefSeq Acc Id:

XP_021575555 ⟸ XM_021719880

- Peptide Label:

isoform X5

- Sequence:

show sequence

MPRGSLSLWELVEEHVPLPEQPEVKRILGEAVVDLSLELRAEVAMLEVLLQEARSSQASGCHPI
SDPCSLLAPPPLLRDLMRQELQQLLQRLRDKAICEGRDPAQAWAAYSPKVIRFALEEPRCDLPE
QEISQMRAGEHSSSHRDLSFIKDQLNMSNIDQVAGYLRGLLEEECRTLEREISTLQCCLEAEHT
QAHQPSEATLEPTLAELKEQKKAMEKELQASLGTSCIFAKYSSHWSHPFRTLDPFLPSMELMEF
GLGLFKATYLYLLWSAAPSLKAGPPAAAGDGSFGAAPGKDQLPHQCPLQHPRPQAEGPTTKQTS
ASVRTCPFYNATLVAMALPASGLILDEFLPRP

hide sequence

RefSeq Acc Id:	XP_040144459 ⟸ XM_040288525
- Peptide Label:	isoform X2
- UniProtKB:	I3M485 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040144460 ⟸ XM_040288526
- Peptide Label:	isoform X3
- UniProtKB:	I3M485 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040144461 ⟸ XM_040288527
- Peptide Label:	isoform X4
- UniProtKB:	I3M485 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000028358 ⟸ ENSSTOT00000034757

RefSeq Acc Id:

ENSSTOP00000003978 ⟸ ENSSTOT00000004435

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000004439	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000004435.3	UniProtKB/TrEMBL
	ENSSTOT00000034757.1	UniProtKB/TrEMBL
InterPro	CCDC24	UniProtKB/TrEMBL
NCBI Gene	Ccdc24	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 24	UniProtKB/TrEMBL
	PTHR28601	UniProtKB/TrEMBL
Pfam	CCDC24	UniProtKB/TrEMBL
UniProt	A0A287D477_ICTTR	UniProtKB/TrEMBL
	I3M485	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar