Lipe (lipase E, hormone sensitive type)

Gene: Lipe (lipase E, hormone sensitive type) Ictidomys tridecemlineatus

Analyze

Symbol:

Lipe

Name:

lipase E, hormone sensitive type

RGD ID:

12481620

Description:

ENCODES a protein that exhibits 1,2-diacylglycerol acylhydrolase activity (ortholog); 1,3-diacylglycerol acylhydrolase activity (ortholog); acylglycerol lipase activity (ortholog); INVOLVED IN cellular response to cold (ortholog); diacylglycerol catabolic process (ortholog); ether lipid metabolic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Carpenter Syndrome 2 (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hormone-sensitive lipase; HSL; lipase E, hormone sensitive type, transcript variant X1; lipase E, hormone sensitive type, transcript variant X2; lipase E, hormone sensitive type, transcript variant X3; lipase E, hormone sensitive type, transcript variant X4; lipase E, hormone sensitive type, transcript variant X5; lipase E, hormone sensitive type, transcript variant X6; monoacylglycerol lipase LIPE; REH; retinyl ester hydrolase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	15,772,658 - 15,792,162 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936706	128,133 - 141,276 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936706	122,939 - 139,506 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

arteriosclerosis (ISO)

Carpenter Syndrome 2 (ISO)

congenital hypoplastic anemia (ISO)

craniosynostosis (ISO)

Diamond-Blackfan anemia (ISO)

familial partial lipodystrophy (ISO)

familial partial lipodystrophy type 6 (ISO)

genetic disease (ISO)

heart disease (ISO)

hypertension (ISO)

Hypertriglyceridemia (ISO)

maple syrup urine disease (ISO)

Metabolic Syndrome (ISO)

obesity (ISO)

schizophrenia (ISO)

type 2 diabetes mellitus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to cold (ISO)

cholesterol metabolic process (IEA)

diacylglycerol catabolic process (ISO,ISS)

ether lipid metabolic process (ISS)

female pregnancy (ISO)

lipid catabolic process (IEA,ISS)

long-chain fatty acid catabolic process (ISO)

response to xenobiotic stimulus (ISO)

retinol metabolic process (IEA)

termination of RNA polymerase I transcription (ISS)

transcription initiation at RNA polymerase I promoter (ISS)

triglyceride catabolic process (IEA,ISO)

Cellular Component

caveola (IEA,ISS)

cytoplasm (IEA,ISS)

cytosol (IEA,ISS)

extracellular space (ISO)

lipid droplet (IEA,ISS)

membrane (ISS)

mitochondrion (ISS)

nucleus (ISS)

plasma membrane (IEA)

Molecular Function

1,2-diacylglycerol acylhydrolase activity (ISS)

1,3-diacylglycerol acylhydrolase activity (ISS)

acylglycerol lipase activity (IEA,ISO,ISS)

all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity (IEA)

hormone-sensitive lipase activity (IEA)

hydrolase activity (IEA)

hydrolase activity, acting on ester bonds (ISO)

lipase activity (IEA)

protein binding (ISO)

protein kinase binding (ISO)

retinyl-palmitate esterase activity (IEA,ISS)

rRNA primary transcript binding (ISS)

serine hydrolase activity (ISO)

sterol esterase activity (IEA,ISS)

triglyceride lipase activity (IEA,ISS)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Lipe
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	15,772,658 - 15,792,162 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936706	128,133 - 141,276 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936706	122,939 - 139,506 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LIPE
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	42,401,514 - 42,427,388 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	42,401,514 - 42,427,388 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	42,905,666 - 42,931,540 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	47,597,506 - 47,623,418 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	47,597,505 - 47,623,418	NCBI
Celera	19	39,706,455 - 39,732,367 (-)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	39,335,797 - 39,361,703 (-)	NCBI		HuRef
CHM1_1	19	42,907,316 - 42,933,231 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	45,220,900 - 45,246,776 (-)	NCBI		T2T-CHM13v2.0

Lipe
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	25,078,952 - 25,097,911 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	25,078,952 - 25,098,135 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	25,379,527 - 25,398,486 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	25,379,527 - 25,398,710 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	26,164,546 - 26,181,006 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	25,088,287 - 25,104,747 (-)	NCBI		MGSCv36	mm8
Celera	7	19,994,853 - 20,011,313 (-)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	13.78	NCBI

Lipe
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	90,093,433 - 90,112,117 (-)	NCBI		GRCr8
mRatBN7.2	1	80,965,612 - 80,984,313 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	80,965,627 - 80,984,310 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	86,357,834 - 86,376,510 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	94,909,045 - 94,927,749 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	88,113,613 - 88,132,294 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	82,248,031 - 82,266,727 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	82,248,046 - 82,266,727 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	83,511,504 - 83,530,200 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	80,663,791 - 80,682,480 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	80,741,901 - 80,760,591 (-)	NCBI
Celera	1	75,407,246 - 75,425,931 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Lipe
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955555	514,410 - 530,759 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955555	511,085 - 531,165 (+)	NCBI	ChiLan1.0	ChiLan1.0

LIPE
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	48,506,457 - 48,534,733 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	50,375,028 - 50,400,941 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	39,289,162 - 39,315,067 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	47,881,292 - 47,907,066 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	47,881,292 - 47,907,066 (-)	Ensembl	panpan1.1		panPan2

LIPE
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	111,987,862 - 112,006,492 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	111,988,029 - 112,006,461 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	111,412,499 - 111,431,532 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	112,598,798 - 112,617,839 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	112,607,340 - 112,617,499 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	112,153,322 - 112,171,913 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	111,788,548 - 111,807,575 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	112,715,381 - 112,734,429 (+)	NCBI		UU_Cfam_GSD_1.0

LIPE
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	49,540,708 - 49,560,125 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	49,543,671 - 49,560,126 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	45,443,742 - 45,454,621 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	6	q12	NCBI

LIPE
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	36,604,822 - 36,630,648 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	36,605,126 - 36,630,376 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	14,849,833 - 14,875,994 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lipe
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624907	363,572 - 379,194 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624907	360,462 - 379,266 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001282250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013364167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040278777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF177401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAESOR010004409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000011578 ⟹ ENSSTOP00000010392

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936706	128,133 - 141,276 (+)	Ensembl

RefSeq Acc Id:

NM_001282250 ⟹ NP_001269179

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,781,235 - 15,792,162 (+)	NCBI
SpeTri2.0	NW_004936706	128,578 - 139,505 (+)	NCBI

Sequence:

show sequence

CTCAGATCCGGGGAGCTCCAGCTCCATTCAGGCCTGGGAGGGCCTCACGGATCCTACAAAGCAT
GGACCTGCGGACGATGACACAGTCGCTGGTGACTCTGGCCGAGGATAACATGGCCTTCTTCTCA
AGCCAAGGCCCCGGGGAGACTGCCCGGCGGCTTTCCAACGTCTTTGCAGGTGTGCGGGAGCAGG
CGCTGGGGCTGGAGCCAGCCCTGGGCAGCCTGCTCAGTGTGGCACACCTCTTTGACCTGGACCC
AGAGACGCCGGCCAATGGGTACCGCAGCCTGGTGCACACGGCCCGCTGCTGCCTAGCACACCTG
CTACACAAGTCCCGCTACGTGGCTTCCAACCGCCGCAGCATCTTCTTCCGCACCAGCCACAACC
TGGCCGAACTGGAGGCCTACCTGGCTGCCCTCACCCAGCTCCGAGCTCTGGCCTACTATGCCCA
GCGTCTACTGGCTACCAACCGGCCAGGGGGACTCTTCTTTGAGGGTGATGAGGGACTCACCGCT
GACTTCTTGCGCGAGTATGTCACACTGCATAAAGGCTGTTTCTATGGCCGCTGCTTGGGCTTCC
AGTTCACACCTTCCATTCGGCCATTCCTGCAGACCATCTCCATTGGGCTGGTGTCCTTCGGGGA
ACACTACAAACGTAATGAGAGTGGTCTCGGTGTGACAGCCAGCTCCCTTTTCACCAGTGGCCGC
TTTGCCATTGACCCAGAGCTGCGTGGGGCCGAGTTTGAGCGGATCACACAGAACCTGGATGTGC
ACTTCTGGAAAGCCTTCTGGAATATCACTGAGATCGAGGTGCTGTCGTCTCTGGCCAACATGGC
ATCAGCCACCGTGAGGGTAAGCCGCCTGATCAGCCTGCCGCCTGAGGCCTTTGAGATGCCACTG
ACCTCTGACCCCAAGCTCACAGTCACCATCTCACCTCCTTTGGCCCACACAGGCCCTGGGCCTG
TCCTCATCAGGCTCATCTCCTATGACCTTCGGGAAGGACAGGACAGTGAGGAGCTCAACAGCAT
GGTGAAGTCTGAGGGCCCTCGGATCCTGGAGCTGCGGCCTCGGCCCCAGCAGACATCGCGCTCA
AGGTCCTTGGTAGTGCANTTCCACGGTGGTGGCTTCGTGGCCCAGACCTCCAAATCGCATGAGC
CCTACCTCAAGAGCTGGGCTCAGGAGCTGGGTGCTCCCATTATCTCCATCGACTACTCCCTGGC
CCCCGAGGCCCCCTTCCCCCGTGCGCTGGAGGAGTGCTTCTTTGCCTACTGCTGGGCTGTCAAG
CACTGTGCCCTCCTCGGCTCTACAGGGGAGCGGATATGCCTTGCAGGAGACAGTGCAGGTGGGA
ATCTCTGCTTTACTGTGGCCCTACGAGCAGCAGCCTATGGAGTACGGGTGCCAGATGGCATCAT
GGCAGCCTACCCAGCCACAATGCTGCAATCCGCTGCCTCTCCCTCCCGCCTTCTGAGCCTCATG
GACCCACTGCTGCCCCTCAGTGTGCTCTCCAAGTGTGTCAGTGCCTATGCAGGTGCAGAGACAG
AGGAACACCCCAACTCAGATGAGAAGGCACTGGGCATGATGGGACTGGTGCGACGGGACACATC
CCTGCTCCTCAGAGACCTCCGCCTGGGCGCCTCCTCATGGCTCAATTCCTTCCTGGAGTTTAGT
GGGCAAAAGTCCCAGAAGACCTCAGCGCCCACAGTAGAGTCAATGCGACGCAGTGTGTCAGAGG
CTGCCCTGGCCCAGCCTGAGGGCCCAGTAGGCACAGACTCCCTCAAGATTCTAACACTGAAGGA
CTTGAACCTGAAGAGCAGCTCTGAGACATCAGAGACCCCCGAGATGTCGCTGTCTGTGGAGACA
CTGGGCCCCTCCACACCCTCTGATGTTAACTTCTTTCTGCGGCCTGAGGATGCCAGAGAAGAGG
CAGAGGCCAAAGAAGGGCTAAGCGCCAAGGACGGTAGCTCCCGGGTGAGCAATGCCTTCCCCGA
GGGTTTCCACCCACGGCGCACAAGCCAGGGTGCCACCCAAATGCCCCTTTACTCATCACCCATT
GTCAAGAACCCCTTCATGTCGCCTCTGCTGGCACCTGACAATATGCTGAAGACCCTGCCACCTG
TGCACATCGTGGCGTGCGCCCTGGACCCCATGCTGGACGACTCGGWCATGTTCGCGAGGCGACT
GCGCGCCCTGGGCCAGCCCGTGACGCTGCGTGTGGTGGAAGACCTGCCGCACGGCTTCCTGAGC
CTGGCTTCGCTGTGCCGCGAGACGCGACAGGCCGCGGAGCTGTGCGTGGAGCGCATCCGCCTCA
TCCTCACTCCACCAGCCGCCGCCGCAGCCGCTGCGCCGCCGCCACTCTGAGCCCGACCAGGCCG
CGCGGGGAGATGGGGCTGCGGGACGACACTAAAGACCTTGTTCCCACCTGCACCGGCCTCCGTG
GTGAATGCGGTGAATGCGCTCAGGGACCAGCCTAGGGGCCCCTTCCAGGGCTCCAGACTCTTCC
GGCCCCAGGCCGGGTGGGCGGGGGTGGGCTGTGCCTTAAGACGGGGGACCACAGGGGCGGGGCA
GGAGCCGGAAGCTGAGACTCGGGCCAGGGGAAGGGCGCACACACACTGGTCACCGAGACAGCTG
GACCTGCACTCCACTACTGCCGTCTGCTGCTGCTGGTCGGTTCTTTTTTTCTAAATAAAAATAT
TTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_013364162 ⟹ XP_013219616

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,775,536 - 15,791,887 (+)	NCBI
SpeTri2.0	NW_004936706	122,939 - 139,506 (+)	NCBI

Sequence:

show sequence

GGCGGGTCCTGGCAGCTAGTATTGGGTCCGGCTTGGGAATCACAGAGAATTGATGGAGTCATCC
GAGGAGACCTCGAAGAATGGCAAAGAGGGGTCGAAGAGCCACAATCGCCGGCGGTGGCGAAAAG
ACAAGGGCAAAGCCTCACGGATCCTACAAAGCATGGACCTGCGGACGATGACACAGTCGCTGGT
GACTCTGGCCGAGGATAACATGGCCTTCTTCTCAAGCCAAGGCCCCGGGGAGACTGCCCGGCGG
CTTTCCAACGTCTTTGCAGGTGTGCGGGAGCAGGCGCTGGGGCTGGAGCCAGCCCTGGGCAGCC
TGCTCAGTGTGGCACACCTCTTTGACCTGGACCCAGAGACGCCAGCCAATGGGTACCGCAGCCT
GGTGCACACGGCCCGCTGCTGCCTAGCACACCTGCTACACAAGTCCCGCTACGTGGCTTCCAAC
CGCCGCAGCATCTTCTTCCGCACCAGCCACAACCTGGCCGAACTGGAGGCCTACCTGGCTGCCC
TCACCCAGCTCCGAGCTCTAGCCTACTATGCCCAGCGTCTACTGGCTACCAACCGGCCAGGGGG
ACTCTTCTTTGAGGGTGATGAGGGACTCACCGCTGACTTCTTGCGCGAGTATGTCACACTGCAT
AAAGGCTGTTTCTATGGCCGCTGCTTGGGCTTCCAGTTCACACCTTCCATTCGGCCATTCCTGC
AGACCATCTCCATTGGGCTGGTGTCCTTCGGGGAACACTACAAACGTAATGAGAGTGGTCTCGG
TGTGACAGCCAGCTCCCTTTTCACCAGTGGCCGCTTTGCCATTGACCCAGAGCTGCGTGGGGCC
GAGTTTGAGCGGATCACACAGAACCTGGATGTGCACTTCTGGAAAGCCTTCTGGAATATCACTG
AGATCGAGGTGCTGTCGTCTCTGGCCAACATGGCATCAGCCACCGTGAGGGTAAGCCGCCTGAT
CAGCCTGCCGCCTGAGGCCTTTGAGATGCCACTGACCTCTGACCCCAAGCTCACAGTCACCATC
TCACCTCCTTTGGCCCACACAGGCCCTGGGCCTGTCCTCATCAGGCTCATCTCCTATGACCTTC
GGGAAGGACAGGACAGTGAGGAGCTCAACAGCATGGTGAAGTCTGAGGGCCCTCGGATCCTGGA
GCTGCGGCCTCGGCCCCAGCAGACATCGCGCTCAAGGTCCTTGGTAGTGCACTTCCACGGTGGT
GGCTTCGTGGCCCAGACCTCCAAATCGCATGAGCCCTACCTCAAGAGCTGGGCTCAGGAGCTGG
GTGCTCCCATTATCTCCATCGACTACTCCCTGGCCCCCGAGGCCCCCTTCCCCCGTGCGCTGGA
GGAGTGCTTCTTTGCCTACTGCTGGGCTGTCAAGCACTGTGCCCTCCTCGGCTCTACAGGGGAG
CGGATATGCCTTGCAGGAGACAGTGCAGGTGGGAATCTCTGCTTTACTGTGGCCCTACGAGCAG
CAGCCTATGGAGTACGGGTGCCAGATGGCATCATGGCAGCCTACCCAGCCACAATGCTGCAATC
CGCTGCCTCTCCCTCCCGCCTTCTGAGCCTCATGGACCCACTGCTGCCCCTCAGTGTGCTCTCC
AAGTGTGTCAGTGCCTATGCAGGTGCAGAGACAGAGGAACACCCCAACTCAGATGAGAAGGCAC
TGGGCATGATGGGACTGGTGCGACGGGACACATCCCTGCTCCTCAGAGACCTCCGCCTGGGCGC
CTCCTCATGGCTCAATTCCTTCCTGGAGTTTAGTGGGCAAAAGTCCCAGAAGACCTCAGCGCCC
ACAGTAGAGGAAGAAAATGAGGCTCCCAGAGAGTCAATGCGACGCAGTGTGTCAGAGGCTGCCC
TGGCCCAGCCTGAGGGCCCAGTAGGCACAGACTCCCTCAAGATTCTAACACTGAAGGACTTGAA
CCTGAAGAGCAGCTCTGAGACATCAGAGACCCCCGAGATGTCGCTGTCTGTGGAGACACTGGGC
CCCTCCACACCCTCTGATGTTAACTTCTTTCTGCGGCCTGAGGATGCCAGAGAAGAGGCAGAGG
CCAAAGAAGGGCTAAGCGCCAACGACGGTAGCTCCCGGGTGAGCAATGCCTTCCCCGAGGGTTT
CCACCCACGGCGCACAAGCCAGGGTGCCACCCAAATGCCCCTTTACTCATCACCCATTGTCAAG
AACCCCTTCATGTCGCCTCTGCTGGCACCTGACAATATGCTGAAGACCCTGCCACCTGTGCACA
TCGTGGCGTGCGCCCTGGACCCCATGCTGGACGACTCGGTCATGTTCGCGAGGCGACTGCGCGC
CCTGGGCCAGCCCGTGACGCTGCGTGTGGTGGAAGACCTGCCGCACGGCTTCCTGAGCCTGGCT
TCACTGTGCCGCGAGACGCGACAGGCCGCGGAGCTGTGCGTGGAGCGCATCCGCCTCATCCTCA
CTCCACCAGCCGCCGCCGCAGCCGCTGCGCCGCCGCCACTCTGAGCCCGACCAGGCTGCGCGGG
GAGATGGGGCTGCGGGACGACACTAAAGACCTTGTTCCCACCTGCACCGGCCTCCGTGGTGAAT
GCGGTGAATGCGCTCAGGGACCAGCCTAGGGGCCCCTTCCAGGGCTCCAGACTCTTCCGGCCCC
AGGCCGGGTGGGCGGGGGTGGGCTGTGCCTTAAGACGGGGGACCACAGGGGCGGGGCAGGAGCC
GGAAGCTGAGACTCGGGCCAGGGGAGGGGCGCACACACACTGGTCACCGAGACAGCTGGACCTG
CACTCCACTACTGCCGTCTGCTGCTGCTGGTCGGTTCTTTTTTTCTAAATAAAAATATTTAATT
AC

hide sequence

RefSeq Acc Id:

XM_013364164 ⟹ XP_013219618

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,781,155 - 15,791,887 (+)	NCBI
SpeTri2.0	NW_004936706	128,471 - 139,506 (+)	NCBI

Sequence:

show sequence

TCCTTTCTGAGTGGGAGGTGGAGTAGATAGCCACTCCCTGGGCAAGTTGGTCCCTCCCCTGGTT
TATCACCCCAGGCTGCTACTGGCACTAGCCACAGATCAGCACCCTCAGATCCGGGGAGCTCCAG
CTCCATTCAGGCCTGGGAGGGCCTCACGGATCCTACAAAGCATGGACCTGCGGACGATGACACA
GTCGCTGGTGACTCTGGCCGAGGATAACATGGCCTTCTTCTCAAGCCAAGGCCCCGGGGAGACT
GCCCGGCGGCTTTCCAACGTCTTTGCAGGTGTGCGGGAGCAGGCGCTGGGGCTGGAGCCAGCCC
TGGGCAGCCTGCTCAGTGTGGCACACCTCTTTGACCTGGACCCAGAGACGCCAGCCAATGGGTA
CCGCAGCCTGGTGCACACGGCCCGCTGCTGCCTAGCACACCTGCTACACAAGTCCCGCTACGTG
GCTTCCAACCGCCGCAGCATCTTCTTCCGCACCAGCCACAACCTGGCCGAACTGGAGGCCTACC
TGGCTGCCCTCACCCAGCTCCGAGCTCTAGCCTACTATGCCCAGCGTCTACTGGCTACCAACCG
GCCAGGGGGACTCTTCTTTGAGGGTGATGAGGGACTCACCGCTGACTTCTTGCGCGAGTATGTC
ACACTGCATAAAGGCTGTTTCTATGGCCGCTGCTTGGGCTTCCAGTTCACACCTTCCATTCGGC
CATTCCTGCAGACCATCTCCATTGGGCTGGTGTCCTTCGGGGAACACTACAAACGTAATGAGAG
TGGTCTCGGTGTGACAGCCAGCTCCCTTTTCACCAGTGGCCGCTTTGCCATTGACCCAGAGCTG
CGTGGGGCCGAGTTTGAGCGGATCACACAGAACCTGGATGTGCACTTCTGGAAAGCCTTCTGGA
ATATCACTGAGATCGAGGTGCTGTCGTCTCTGGCCAACATGGCATCAGCCACCGTGAGGGTAAG
CCGCCTGATCAGCCTGCCGCCTGAGGCCTTTGAGATGCCACTGACCTCTGACCCCAAGCTCACA
GTCACCATCTCACCTCCTTTGGCCCACACAGGCCCTGGGCCTGTCCTCATCAGGCTCATCTCCT
ATGACCTTCGGGAAGGACAGGACAGTGAGGAGCTCAACAGCATGGTGAAGTCTGAGGGCCCTCG
GATCCTGGAGCTGCGGCCTCGGCCCCAGCAGACATCGCGCTCAAGGTCCTTGGTAGTGCACTTC
CACGGTGGTGGCTTCGTGGCCCAGACCTCCAAATCGCATGAGCCCTACCTCAAGAGCTGGGCTC
AGGAGCTGGGTGCTCCCATTATCTCCATCGACTACTCCCTGGCCCCCGAGGCCCCCTTCCCCCG
TGCGCTGGAGGAGTGCTTCTTTGCCTACTGCTGGGCTGTCAAGCACTGTGCCCTCCTCGGCTCT
ACAGGGGAGCGGATATGCCTTGCAGGAGACAGTGCAGGTGGGAATCTCTGCTTTACTGTGGCCC
TACGAGCAGCAGCCTATGGAGTACGGGTGCCAGATGGCATCATGGCAGCCTACCCAGCCACAAT
GCTGCAATCCGCTGCCTCTCCCTCCCGCCTTCTGAGCCTCATGGACCCACTGCTGCCCCTCAGT
GTGCTCTCCAAGTGTGTCAGTGCCTATGCAGGTGCAGAGACAGAGGAACACCCCAACTCAGATG
AGAAGGCACTGGGCATGATGGGACTGGTGCGACGGGACACATCCCTGCTCCTCAGAGACCTCCG
CCTGGGCGCCTCCTCATGGCTCAATTCCTTCCTGGAGTTTAGTGGGCAAAAGTCCCAGAAGACC
TCAGCGCCCACAGTAGAGGAAGAAAATGAGGCTCCCAGAGAGTCAATGCGACGCAGTGTGTCAG
AGGCTGCCCTGGCCCAGCCTGAGGGCCCAGTAGGCACAGACTCCCTCAAGATTCTAACACTGAA
GGACTTGAACCTGAAGAGCAGCTCTGAGACATCAGAGACCCCCGAGATGTCGCTGTCTGTGGAG
ACACTGGGCCCCTCCACACCCTCTGATGTTAACTTCTTTCTGCGGCCTGAGGATGCCAGAGAAG
AGGCAGAGGCCAAAGAAGGGCTAAGCGCCAACGACGGTAGCTCCCGGGTGAGCAATGCCTTCCC
CGAGGGTTTCCACCCACGGCGCACAAGCCAGGGTGCCACCCAAATGCCCCTTTACTCATCACCC
ATTGTCAAGAACCCCTTCATGTCGCCTCTGCTGGCACCTGACAATATGCTGAAGACCCTGCCAC
CTGTGCACATCGTGGCGTGCGCCCTGGACCCCATGCTGGACGACTCGGTCATGTTCGCGAGGCG
ACTGCGCGCCCTGGGCCAGCCCGTGACGCTGCGTGTGGTGGAAGACCTGCCGCACGGCTTCCTG
AGCCTGGCTTCACTGTGCCGCGAGACGCGACAGGCCGCGGAGCTGTGCGTGGAGCGCATCCGCC
TCATCCTCACTCCACCAGCCGCCGCCGCAGCCGCTGCGCCGCCGCCACTCTGAGCCCGACCAGG
CTGCGCGGGGAGATGGGGCTGCGGGACGACACTAAAGACCTTGTTCCCACCTGCACCGGCCTCC
GTGGTGAATGCGGTGAATGCGCTCAGGGACCAGCCTAGGGGCCCCTTCCAGGGCTCCAGACTCT
TCCGGCCCCAGGCCGGGTGGGCGGGGGTGGGCTGTGCCTTAAGACGGGGGACCACAGGGGCGGG
GCAGGAGCCGGAAGCTGAGACTCGGGCCAGGGGAGGGGCGCACACACACTGGTCACCGAGACAG
CTGGACCTGCACTCCACTACTGCCGTCTGCTGCTGCTGGTCGGTTCTTTTTTTCTAAATAAAAA
TATTTAATTAC

hide sequence

RefSeq Acc Id:

XM_013364165 ⟹ XP_013219619

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,781,319 - 15,791,887 (+)	NCBI
SpeTri2.0	NW_004936706	128,606 - 139,506 (+)	NCBI

Sequence:

show sequence

CAGGCCTGGGAGGGGTGAGTGCATGGTCAGTTAAGATACAGGAACGGCTGCTGCCCAATTTCAG
GGCCTAGAAGGGAGAGGAGAGCCTTCCTTTACTGGACCAAGGGACCATAAACCCAGAGCCAGGC
AGGATATGGGCCTTGTCTTCAGGCAGATGGTGGCAGCCCCACCAGTGGGCCTCACGGATCCTAC
AAAGCATGGACCTGCGGACGATGACACAGTCGCTGGTGACTCTGGCCGAGGATAACATGGCCTT
CTTCTCAAGCCAAGGCCCCGGGGAGACTGCCCGGCGGCTTTCCAACGTCTTTGCAGGTGTGCGG
GAGCAGGCGCTGGGGCTGGAGCCAGCCCTGGGCAGCCTGCTCAGTGTGGCACACCTCTTTGACC
TGGACCCAGAGACGCCAGCCAATGGGTACCGCAGCCTGGTGCACACGGCCCGCTGCTGCCTAGC
ACACCTGCTACACAAGTCCCGCTACGTGGCTTCCAACCGCCGCAGCATCTTCTTCCGCACCAGC
CACAACCTGGCCGAACTGGAGGCCTACCTGGCTGCCCTCACCCAGCTCCGAGCTCTAGCCTACT
ATGCCCAGCGTCTACTGGCTACCAACCGGCCAGGGGGACTCTTCTTTGAGGGTGATGAGGGACT
CACCGCTGACTTCTTGCGCGAGTATGTCACACTGCATAAAGGCTGTTTCTATGGCCGCTGCTTG
GGCTTCCAGTTCACACCTTCCATTCGGCCATTCCTGCAGACCATCTCCATTGGGCTGGTGTCCT
TCGGGGAACACTACAAACGTAATGAGAGTGGTCTCGGTGTGACAGCCAGCTCCCTTTTCACCAG
TGGCCGCTTTGCCATTGACCCAGAGCTGCGTGGGGCCGAGTTTGAGCGGATCACACAGAACCTG
GATGTGCACTTCTGGAAAGCCTTCTGGAATATCACTGAGATCGAGGTGCTGTCGTCTCTGGCCA
ACATGGCATCAGCCACCGTGAGGGTAAGCCGCCTGATCAGCCTGCCGCCTGAGGCCTTTGAGAT
GCCACTGACCTCTGACCCCAAGCTCACAGTCACCATCTCACCTCCTTTGGCCCACACAGGCCCT
GGGCCTGTCCTCATCAGGCTCATCTCCTATGACCTTCGGGAAGGACAGGACAGTGAGGAGCTCA
ACAGCATGGTGAAGTCTGAGGGCCCTCGGATCCTGGAGCTGCGGCCTCGGCCCCAGCAGACATC
GCGCTCAAGGTCCTTGGTAGTGCACTTCCACGGTGGTGGCTTCGTGGCCCAGACCTCCAAATCG
CATGAGCCCTACCTCAAGAGCTGGGCTCAGGAGCTGGGTGCTCCCATTATCTCCATCGACTACT
CCCTGGCCCCCGAGGCCCCCTTCCCCCGTGCGCTGGAGGAGTGCTTCTTTGCCTACTGCTGGGC
TGTCAAGCACTGTGCCCTCCTCGGCTCTACAGGGGAGCGGATATGCCTTGCAGGAGACAGTGCA
GGTGGGAATCTCTGCTTTACTGTGGCCCTACGAGCAGCAGCCTATGGAGTACGGGTGCCAGATG
GCATCATGGCAGCCTACCCAGCCACAATGCTGCAATCCGCTGCCTCTCCCTCCCGCCTTCTGAG
CCTCATGGACCCACTGCTGCCCCTCAGTGTGCTCTCCAAGTGTGTCAGTGCCTATGCAGGTGCA
GAGACAGAGGAACACCCCAACTCAGATGAGAAGGCACTGGGCATGATGGGACTGGTGCGACGGG
ACACATCCCTGCTCCTCAGAGACCTCCGCCTGGGCGCCTCCTCATGGCTCAATTCCTTCCTGGA
GTTTAGTGGGCAAAAGTCCCAGAAGACCTCAGCGCCCACAGTAGAGGAAGAAAATGAGGCTCCC
AGAGAGTCAATGCGACGCAGTGTGTCAGAGGCTGCCCTGGCCCAGCCTGAGGGCCCAGTAGGCA
CAGACTCCCTCAAGATTCTAACACTGAAGGACTTGAACCTGAAGAGCAGCTCTGAGACATCAGA
GACCCCCGAGATGTCGCTGTCTGTGGAGACACTGGGCCCCTCCACACCCTCTGATGTTAACTTC
TTTCTGCGGCCTGAGGATGCCAGAGAAGAGGCAGAGGCCAAAGAAGGGCTAAGCGCCAACGACG
GTAGCTCCCGGGTGAGCAATGCCTTCCCCGAGGGTTTCCACCCACGGCGCACAAGCCAGGGTGC
CACCCAAATGCCCCTTTACTCATCACCCATTGTCAAGAACCCCTTCATGTCGCCTCTGCTGGCA
CCTGACAATATGCTGAAGACCCTGCCACCTGTGCACATCGTGGCGTGCGCCCTGGACCCCATGC
TGGACGACTCGGTCATGTTCGCGAGGCGACTGCGCGCCCTGGGCCAGCCCGTGACGCTGCGTGT
GGTGGAAGACCTGCCGCACGGCTTCCTGAGCCTGGCTTCACTGTGCCGCGAGACGCGACAGGCC
GCGGAGCTGTGCGTGGAGCGCATCCGCCTCATCCTCACTCCACCAGCCGCCGCCGCAGCCGCTG
CGCCGCCGCCACTCTGAGCCCGACCAGGCTGCGCGGGGAGATGGGGCTGCGGGACGACACTAAA
GACCTTGTTCCCACCTGCACCGGCCTCCGTGGTGAATGCGGTGAATGCGCTCAGGGACCAGCCT
AGGGGCCCCTTCCAGGGCTCCAGACTCTTCCGGCCCCAGGCCGGGTGGGCGGGGGTGGGCTGTG
CCTTAAGACGGGGGACCACAGGGGCGGGGCAGGAGCCGGAAGCTGAGACTCGGGCCAGGGGAGG
GGCGCACACACACTGGTCACCGAGACAGCTGGACCTGCACTCCACTACTGCCGTCTGCTGCTGC
TGGTCGGTTCTTTTTTTCTAAATAAAAATATTTAATTAC

hide sequence

RefSeq Acc Id:

XM_013364166 ⟹ XP_013219620

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,781,266 - 15,791,887 (+)	NCBI
SpeTri2.0	NW_004936706	128,569 - 139,506 (+)	NCBI

Sequence:

show sequence

ATCAGCACCCTCAGATCCGGGGAGCTCCAGCTCCATTCAGGCCTGGGAGGGGTGAGTGCATGCC
TCACGGATCCTACAAAGCATGGACCTGCGGACGATGACACAGTCGCTGGTGACTCTGGCCGAGG
ATAACATGGCCTTCTTCTCAAGCCAAGGCCCCGGGGAGACTGCCCGGCGGCTTTCCAACGTCTT
TGCAGGTGTGCGGGAGCAGGCGCTGGGGCTGGAGCCAGCCCTGGGCAGCCTGCTCAGTGTGGCA
CACCTCTTTGACCTGGACCCAGAGACGCCAGCCAATGGGTACCGCAGCCTGGTGCACACGGCCC
GCTGCTGCCTAGCACACCTGCTACACAAGTCCCGCTACGTGGCTTCCAACCGCCGCAGCATCTT
CTTCCGCACCAGCCACAACCTGGCCGAACTGGAGGCCTACCTGGCTGCCCTCACCCAGCTCCGA
GCTCTAGCCTACTATGCCCAGCGTCTACTGGCTACCAACCGGCCAGGGGGACTCTTCTTTGAGG
GTGATGAGGGACTCACCGCTGACTTCTTGCGCGAGTATGTCACACTGCATAAAGGCTGTTTCTA
TGGCCGCTGCTTGGGCTTCCAGTTCACACCTTCCATTCGGCCATTCCTGCAGACCATCTCCATT
GGGCTGGTGTCCTTCGGGGAACACTACAAACGTAATGAGAGTGGTCTCGGTGTGACAGCCAGCT
CCCTTTTCACCAGTGGCCGCTTTGCCATTGACCCAGAGCTGCGTGGGGCCGAGTTTGAGCGGAT
CACACAGAACCTGGATGTGCACTTCTGGAAAGCCTTCTGGAATATCACTGAGATCGAGGTGCTG
TCGTCTCTGGCCAACATGGCATCAGCCACCGTGAGGGTAAGCCGCCTGATCAGCCTGCCGCCTG
AGGCCTTTGAGATGCCACTGACCTCTGACCCCAAGCTCACAGTCACCATCTCACCTCCTTTGGC
CCACACAGGCCCTGGGCCTGTCCTCATCAGGCTCATCTCCTATGACCTTCGGGAAGGACAGGAC
AGTGAGGAGCTCAACAGCATGGTGAAGTCTGAGGGCCCTCGGATCCTGGAGCTGCGGCCTCGGC
CCCAGCAGACATCGCGCTCAAGGTCCTTGGTAGTGCACTTCCACGGTGGTGGCTTCGTGGCCCA
GACCTCCAAATCGCATGAGCCCTACCTCAAGAGCTGGGCTCAGGAGCTGGGTGCTCCCATTATC
TCCATCGACTACTCCCTGGCCCCCGAGGCCCCCTTCCCCCGTGCGCTGGAGGAGTGCTTCTTTG
CCTACTGCTGGGCTGTCAAGCACTGTGCCCTCCTCGGCTCTACAGGGGAGCGGATATGCCTTGC
AGGAGACAGTGCAGGTGGGAATCTCTGCTTTACTGTGGCCCTACGAGCAGCAGCCTATGGAGTA
CGGGTGCCAGATGGCATCATGGCAGCCTACCCAGCCACAATGCTGCAATCCGCTGCCTCTCCCT
CCCGCCTTCTGAGCCTCATGGACCCACTGCTGCCCCTCAGTGTGCTCTCCAAGTGTGTCAGTGC
CTATGCAGGTGCAGAGACAGAGGAACACCCCAACTCAGATGAGAAGGCACTGGGCATGATGGGA
CTGGTGCGACGGGACACATCCCTGCTCCTCAGAGACCTCCGCCTGGGCGCCTCCTCATGGCTCA
ATTCCTTCCTGGAGTTTAGTGGGCAAAAGTCCCAGAAGACCTCAGCGCCCACAGTAGAGGAAGA
AAATGAGGCTCCCAGAGAGTCAATGCGACGCAGTGTGTCAGAGGCTGCCCTGGCCCAGCCTGAG
GGCCCAGTAGGCACAGACTCCCTCAAGATTCTAACACTGAAGGACTTGAACCTGAAGAGCAGCT
CTGAGACATCAGAGACCCCCGAGATGTCGCTGTCTGTGGAGACACTGGGCCCCTCCACACCCTC
TGATGTTAACTTCTTTCTGCGGCCTGAGGATGCCAGAGAAGAGGCAGAGGCCAAAGAAGGGCTA
AGCGCCAACGACGGTAGCTCCCGGGTGAGCAATGCCTTCCCCGAGGGTTTCCACCCACGGCGCA
CAAGCCAGGGTGCCACCCAAATGCCCCTTTACTCATCACCCATTGTCAAGAACCCCTTCATGTC
GCCTCTGCTGGCACCTGACAATATGCTGAAGACCCTGCCACCTGTGCACATCGTGGCGTGCGCC
CTGGACCCCATGCTGGACGACTCGGTCATGTTCGCGAGGCGACTGCGCGCCCTGGGCCAGCCCG
TGACGCTGCGTGTGGTGGAAGACCTGCCGCACGGCTTCCTGAGCCTGGCTTCACTGTGCCGCGA
GACGCGACAGGCCGCGGAGCTGTGCGTGGAGCGCATCCGCCTCATCCTCACTCCACCAGCCGCC
GCCGCAGCCGCTGCGCCGCCGCCACTCTGAGCCCGACCAGGCTGCGCGGGGAGATGGGGCTGCG
GGACGACACTAAAGACCTTGTTCCCACCTGCACCGGCCTCCGTGGTGAATGCGGTGAATGCGCT
CAGGGACCAGCCTAGGGGCCCCTTCCAGGGCTCCAGACTCTTCCGGCCCCAGGCCGGGTGGGCG
GGGGTGGGCTGTGCCTTAAGACGGGGGACCACAGGGGCGGGGCAGGAGCCGGAAGCTGAGACTC
GGGCCAGGGGAGGGGCGCACACACACTGGTCACCGAGACAGCTGGACCTGCACTCCACTACTGC
CGTCTGCTGCTGCTGGTCGGTTCTTTTTTTCTAAATAAAAATATTTAATTAC

hide sequence

RefSeq Acc Id:

XM_040278772 ⟹ XP_040134706

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,772,663 - 15,791,887 (+)	NCBI

RefSeq Acc Id:

XM_040278773 ⟹ XP_040134707

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,772,658 - 15,792,146 (+)	NCBI

RefSeq Acc Id:

XM_040278774 ⟹ XP_040134708

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,774,275 - 15,791,887 (+)	NCBI

RefSeq Acc Id:

XM_040278775 ⟹ XP_040134709

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,780,709 - 15,791,887 (+)	NCBI

RefSeq Acc Id:

XM_040278776 ⟹ XP_040134710

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,775,950 - 15,791,887 (+)	NCBI

RefSeq Acc Id:

XM_040278777 ⟹ XP_040134711

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	15,775,790 - 15,791,887 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001269179	(Get FASTA)	NCBI Sequence Viewer
	XP_013219616	(Get FASTA)	NCBI Sequence Viewer
	XP_013219618	(Get FASTA)	NCBI Sequence Viewer
	XP_013219619	(Get FASTA)	NCBI Sequence Viewer
	XP_013219620	(Get FASTA)	NCBI Sequence Viewer
	XP_040134706	(Get FASTA)	NCBI Sequence Viewer
	XP_040134707	(Get FASTA)	NCBI Sequence Viewer
	XP_040134708	(Get FASTA)	NCBI Sequence Viewer
	XP_040134709	(Get FASTA)	NCBI Sequence Viewer
	XP_040134710	(Get FASTA)	NCBI Sequence Viewer
	XP_040134711	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD51122	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000010392.2
GenBank Protein	KAG3256126	(Get FASTA)	NCBI Sequence Viewer
	KAG3256127	(Get FASTA)	NCBI Sequence Viewer
	KAG3256128	(Get FASTA)	NCBI Sequence Viewer
	KAG3256129	(Get FASTA)	NCBI Sequence Viewer
	KAG3256130	(Get FASTA)	NCBI Sequence Viewer
	KAG3256131	(Get FASTA)	NCBI Sequence Viewer
	KAG3256132	(Get FASTA)	NCBI Sequence Viewer
	Q9R101	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013219616 ⟸ XM_013364162
- Peptide Label:	isoform X3
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MESSEETSKNGKEGSKSHNRRRWRKDKGKASRILQSMDLRTMTQSLVTLAEDNMAFFSSQGPGE TARRLSNVFAGVREQALGLEPALGSLLSVAHLFDLDPETPANGYRSLVHTARCCLAHLLHKSRY VASNRRSIFFRTSHNLAELEAYLAALTQLRALAYYAQRLLATNRPGGLFFEGDEGLTADFLREY VTLHKGCFYGRCLGFQFTPSIRPFLQTISIGLVSFGEHYKRNESGLGVTASSLFTSGRFAIDPE LRGAEFERITQNLDVHFWKAFWNITEIEVLSSLANMASATVRVSRLISLPPEAFEMPLTSDPKL TVTISPPLAHTGPGPVLIRLISYDLREGQDSEELNSMVKSEGPRILELRPRPQQTSRSRSLVVH FHGGGFVAQTSKSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAVKHCALLG STGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGIMAAYPATMLQSAASPSRLLSLMDPLLPL SVLSKCVSAYAGAETEEHPNSDEKALGMMGLVRRDTSLLLRDLRLGASSWLNSFLEFSGQKSQK TSAPTVEEENEAPRESMRRSVSEAALAQPEGPVGTDSLKILTLKDLNLKSSSETSETPEMSLSV ETLGPSTPSDVNFFLRPEDAREEAEAKEGLSANDGSSRVSNAFPEGFHPRRTSQGATQMPLYSS PIVKNPFMSPLLAPDNMLKTLPPVHIVACALDPMLDDSVMFARRLRALGQPVTLRVVEDLPHGF LSLASLCRETRQAAELCVERIRLILTPPAAAAAAAPPPL hide sequence

RefSeq Acc Id:	XP_013219618 ⟸ XM_013364164
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLRTMTQSLVTLAEDNMAFFSSQGPGETARRLSNVFAGVREQALGLEPALGSLLSVAHLFDLD PETPANGYRSLVHTARCCLAHLLHKSRYVASNRRSIFFRTSHNLAELEAYLAALTQLRALAYYA QRLLATNRPGGLFFEGDEGLTADFLREYVTLHKGCFYGRCLGFQFTPSIRPFLQTISIGLVSFG EHYKRNESGLGVTASSLFTSGRFAIDPELRGAEFERITQNLDVHFWKAFWNITEIEVLSSLANM ASATVRVSRLISLPPEAFEMPLTSDPKLTVTISPPLAHTGPGPVLIRLISYDLREGQDSEELNS MVKSEGPRILELRPRPQQTSRSRSLVVHFHGGGFVAQTSKSHEPYLKSWAQELGAPIISIDYSL APEAPFPRALEECFFAYCWAVKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGI MAAYPATMLQSAASPSRLLSLMDPLLPLSVLSKCVSAYAGAETEEHPNSDEKALGMMGLVRRDT SLLLRDLRLGASSWLNSFLEFSGQKSQKTSAPTVEEENEAPRESMRRSVSEAALAQPEGPVGTD SLKILTLKDLNLKSSSETSETPEMSLSVETLGPSTPSDVNFFLRPEDAREEAEAKEGLSANDGS SRVSNAFPEGFHPRRTSQGATQMPLYSSPIVKNPFMSPLLAPDNMLKTLPPVHIVACALDPMLD DSVMFARRLRALGQPVTLRVVEDLPHGFLSLASLCRETRQAAELCVERIRLILTPPAAAAAAAP PPL hide sequence

RefSeq Acc Id:	XP_013219620 ⟸ XM_013364166
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLRTMTQSLVTLAEDNMAFFSSQGPGETARRLSNVFAGVREQALGLEPALGSLLSVAHLFDLD PETPANGYRSLVHTARCCLAHLLHKSRYVASNRRSIFFRTSHNLAELEAYLAALTQLRALAYYA QRLLATNRPGGLFFEGDEGLTADFLREYVTLHKGCFYGRCLGFQFTPSIRPFLQTISIGLVSFG EHYKRNESGLGVTASSLFTSGRFAIDPELRGAEFERITQNLDVHFWKAFWNITEIEVLSSLANM ASATVRVSRLISLPPEAFEMPLTSDPKLTVTISPPLAHTGPGPVLIRLISYDLREGQDSEELNS MVKSEGPRILELRPRPQQTSRSRSLVVHFHGGGFVAQTSKSHEPYLKSWAQELGAPIISIDYSL APEAPFPRALEECFFAYCWAVKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGI MAAYPATMLQSAASPSRLLSLMDPLLPLSVLSKCVSAYAGAETEEHPNSDEKALGMMGLVRRDT SLLLRDLRLGASSWLNSFLEFSGQKSQKTSAPTVEEENEAPRESMRRSVSEAALAQPEGPVGTD SLKILTLKDLNLKSSSETSETPEMSLSVETLGPSTPSDVNFFLRPEDAREEAEAKEGLSANDGS SRVSNAFPEGFHPRRTSQGATQMPLYSSPIVKNPFMSPLLAPDNMLKTLPPVHIVACALDPMLD DSVMFARRLRALGQPVTLRVVEDLPHGFLSLASLCRETRQAAELCVERIRLILTPPAAAAAAAP PPL hide sequence

RefSeq Acc Id:

NP_001269179 ⟸ NM_001282250

- UniProtKB:

Q9R101 (UniProtKB/Swiss-Prot), I3MHL5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDLRTMTQSLVTLAEDNMAFFSSQGPGETARRLSNVFAGVREQALGLEPALGSLLSVAHLFDLD
PETPANGYRSLVHTARCCLAHLLHKSRYVASNRRSIFFRTSHNLAELEAYLAALTQLRALAYYA
QRLLATNRPGGLFFEGDEGLTADFLREYVTLHKGCFYGRCLGFQFTPSIRPFLQTISIGLVSFG
EHYKRNESGLGVTASSLFTSGRFAIDPELRGAEFERITQNLDVHFWKAFWNITEIEVLSSLANM
ASATVRVSRLISLPPEAFEMPLTSDPKLTVTISPPLAHTGPGPVLIRLISYDLREGQDSEELNS
MVKSEGPRILELRPRPQQTSRSRSLVVXFHGGGFVAQTSKSHEPYLKSWAQELGAPIISIDYSL
APEAPFPRALEECFFAYCWAVKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGI
MAAYPATMLQSAASPSRLLSLMDPLLPLSVLSKCVSAYAGAETEEHPNSDEKALGMMGLVRRDT
SLLLRDLRLGASSWLNSFLEFSGQKSQKTSAPTVESMRRSVSEAALAQPEGPVGTDSLKILTLK
DLNLKSSSETSETPEMSLSVETLGPSTPSDVNFFLRPEDAREEAEAKEGLSAKDGSSRVSNAFP
EGFHPRRTSQGATQMPLYSSPIVKNPFMSPLLAPDNMLKTLPPVHIVACALDPMLDDSXMFARR
LRALGQPVTLRVVEDLPHGFLSLASLCRETRQAAELCVERIRLILTPPAAAAAAAPPPL

hide sequence

RefSeq Acc Id:	XP_013219619 ⟸ XM_013364165
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLRTMTQSLVTLAEDNMAFFSSQGPGETARRLSNVFAGVREQALGLEPALGSLLSVAHLFDLD PETPANGYRSLVHTARCCLAHLLHKSRYVASNRRSIFFRTSHNLAELEAYLAALTQLRALAYYA QRLLATNRPGGLFFEGDEGLTADFLREYVTLHKGCFYGRCLGFQFTPSIRPFLQTISIGLVSFG EHYKRNESGLGVTASSLFTSGRFAIDPELRGAEFERITQNLDVHFWKAFWNITEIEVLSSLANM ASATVRVSRLISLPPEAFEMPLTSDPKLTVTISPPLAHTGPGPVLIRLISYDLREGQDSEELNS MVKSEGPRILELRPRPQQTSRSRSLVVHFHGGGFVAQTSKSHEPYLKSWAQELGAPIISIDYSL APEAPFPRALEECFFAYCWAVKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGI MAAYPATMLQSAASPSRLLSLMDPLLPLSVLSKCVSAYAGAETEEHPNSDEKALGMMGLVRRDT SLLLRDLRLGASSWLNSFLEFSGQKSQKTSAPTVEEENEAPRESMRRSVSEAALAQPEGPVGTD SLKILTLKDLNLKSSSETSETPEMSLSVETLGPSTPSDVNFFLRPEDAREEAEAKEGLSANDGS SRVSNAFPEGFHPRRTSQGATQMPLYSSPIVKNPFMSPLLAPDNMLKTLPPVHIVACALDPMLD DSVMFARRLRALGQPVTLRVVEDLPHGFLSLASLCRETRQAAELCVERIRLILTPPAAAAAAAP PPL hide sequence

RefSeq Acc Id:	XP_040134707 ⟸ XM_040278773
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040134706 ⟸ XM_040278772
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040134708 ⟸ XM_040278774
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040134711 ⟸ XM_040278777
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040134710 ⟸ XM_040278776
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040134709 ⟸ XM_040278775
- Peptide Label:	isoform X4
- UniProtKB:	I3MHL5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000010392 ⟸ ENSSTOT00000011578

Protein Domains

Alpha/beta hydrolase fold-3 Hormone-sensitive lipase N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000011564	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000011578.3	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	AB_hydrolase_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HSL_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Lipase_GDXG_HIS_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Lipase_GDXG_put_SER_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	Lipe	ENTREZGENE
PANTHER	HORMONE-SENSITIVE LIPASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRIACYLGLYCEROL LIPASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Abhydrolase_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HSL_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	LIPASE_GDXG_HIS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LIPASE_GDXG_SER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF53474	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	I3MHL5	ENTREZGENE, UniProtKB/TrEMBL
	LIPS_ICTTR	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM