Ap3m2 (adaptor related protein complex 3 subunit mu 2)

Gene: Ap3m2 (adaptor related protein complex 3 subunit mu 2) Ictidomys tridecemlineatus

Analyze

Symbol:

Ap3m2

Name:

adaptor related protein complex 3 subunit mu 2

RGD ID:

12464795

Description:

INVOLVED IN synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH IMMUNODEFICIENCY 15 (ortholog); immunodeficiency 15B (ortholog); torsion dystonia 6 (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

adaptor related protein complex 3 mu 2 subunit; adaptor related protein complex 3 mu 2 subunit, transcript variant X1; adaptor related protein complex 3 mu 2 subunit, transcript variant X2; adaptor related protein complex 3 mu 2 subunit, transcript variant X3; adaptor related protein complex 3 mu 2 subunit, transcript variant X4; adaptor related protein complex 3 mu 2 subunit, transcript variant X5; AP-3 complex subunit mu-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	46,547,219 - 46,569,288 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936785	508,848 - 525,391 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936785	503,615 - 525,361 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

IMMUNODEFICIENCY 15 (ISO)

immunodeficiency 15B (ISO)

torsion dystonia 6 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterograde axonal transport (IEA)

anterograde synaptic vesicle transport (IEA)

endocytosis (IEA)

establishment of localization in cell (IEA)

intracellular protein transport (IEA)

protein transport (IEA)

synaptic vesicle endocytosis (ISO)

vesicle-mediated transport (IEA)

Cellular Component

axon cytoplasm (IEA)

clathrin adaptor complex (IEA)

cytoplasmic vesicle (IEA)

cytoplasmic vesicle membrane (IEA)

GABA-ergic synapse (ISO)

glutamatergic synapse (ISO)

Golgi apparatus (IEA)

membrane (IEA)

synaptic vesicle (ISO)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Ap3m2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	46,547,219 - 46,569,288 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936785	508,848 - 525,391 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936785	503,615 - 525,361 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AP3M2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	42,153,063 - 42,171,183 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	42,152,946 - 42,171,673 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	42,010,581 - 42,028,701 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	42,129,761 - 42,147,858 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	42,129,760 - 42,147,858	NCBI
Celera	8	40,959,278 - 40,977,658 (+)	NCBI		Celera
Cytogenetic Map	8	p11.21	NCBI
HuRef	8	40,537,926 - 40,556,180 (+)	NCBI		HuRef
CHM1_1	8	42,058,770 - 42,077,010 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	42,427,379 - 42,445,504 (+)	NCBI		T2T-CHM13v2.0

Ap3m2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	23,277,370 - 23,297,308 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	23,277,370 - 23,295,638 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	22,787,354 - 22,807,292 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	22,787,354 - 22,805,622 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	23,897,826 - 23,916,126 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	24,252,900 - 24,271,176 (-)	NCBI		MGSCv36	mm8
Celera	8	24,277,100 - 24,295,419 (-)	NCBI		Celera
Cytogenetic Map	8	A2	NCBI
cM Map	8	11.42	NCBI

Ap3m2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	75,908,459 - 75,937,915 (+)	NCBI		GRCr8
mRatBN7.2	16	69,217,526 - 69,237,372 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	69,217,633 - 69,235,431 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	74,491,898 - 74,507,281 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	77,924,257 - 77,939,760 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	73,173,400 - 73,188,903 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	74,075,842 - 74,091,230 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	74,076,812 - 74,091,139 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	73,708,174 - 73,723,223 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	73,687,443 - 73,704,278 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	73,688,647 - 73,706,426 (+)	NCBI
Celera	16	67,111,665 - 67,127,395 (+)	NCBI		Celera
Cytogenetic Map	16	q12.5	NCBI

Ap3m2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955536	767,306 - 812,204 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955536	767,470 - 900,268 (-)	NCBI	ChiLan1.0	ChiLan1.0

AP3M2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	60,605,245 - 60,623,563 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	36,322,564 - 36,340,883 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	41,397,123 - 41,415,379 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	38,842,803 - 38,861,030 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	38,842,811 - 38,861,030 (+)	Ensembl	panpan1.1		panPan2

AP3M2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	23,500,988 - 23,518,193 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	23,454,325 - 23,518,193 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	24,005,479 - 24,022,678 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	25,246,167 - 25,266,357 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	25,202,710 - 25,266,368 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	23,620,257 - 23,637,441 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	24,183,842 - 24,201,040 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	24,234,760 - 24,251,957 (-)	NCBI		UU_Cfam_GSD_1.0

AP3M2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	11,167,161 - 11,190,854 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	11,167,118 - 11,190,857 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	13,140,152 - 13,161,984 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AP3M2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	40,142,577 - 40,161,013 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	40,142,666 - 40,161,008 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	1,625,641 - 1,644,086 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ap3m2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624780	1,068,498 - 1,086,551 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624780	1,054,796 - 1,091,688 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005340312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021720196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021720197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021720198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021720199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040268408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040268412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002482831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002482832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005726172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005726175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000009672 ⟹ ENSSTOP00000008677

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936785	509,384 - 525,391 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000037105 ⟹ ENSSTOP00000024944

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936785	508,848 - 525,391 (-)	Ensembl

RefSeq Acc Id:

XM_005340312 ⟹ XP_005340369

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,567,858 (-)	NCBI
SpeTri2.0	NW_004936785	507,169 - 524,201 (-)	NCBI

Sequence:

show sequence

CTTGGCCTCCCAAGCAACTGGGATTACAGGTTTGAAAGTTTGCAGAATCCTGAGACTTTCCCAC
TGAAAAAGACTTTCCTCTTCACTGACAATTTCCCACCATGATTCATAGTCTTTTCTTGATCAAC
TCCTCTGGAGATATTTTCCTGGAGAAACATTGGAAAAGTGTGGTCAGTCGTTCTGTTTGCGATT
ACTTTTTTGAGGCACAGGAAAGAGCAACTGAGGCAGAAAATGTGCCTCCAGTTATCCCTACCCC
TCACCATTATCTCTTAAGTGTTTACCGCCACAAGATCTTTTTTGTGGCCGTGATTCAGACTGAG
GTCCCACCTCTGTTTGTCATTGAGTTCCTTCACCGAGTAGTGGACACATTTCAGGATTATTTTG
GAGTCTGTTCAGAGCCGGTGATCAAAGACAATGTGGTTGTGGTTTATGAGGTTTTAGAAGAGAT
GCTTGATAATGGGTTTCCCTTGGCTACTGAGTCGAACATTCTCAAAGAACTGATAAAGCCTCCC
ACTATCCTTCGGACAGTTGTCAACACCATAACAGGAAGTACCAATGTGGGTGACCAACTTCCAA
CTGGGCAGCTGTCAGTGGTGCCTTGGCGACGGACTGGGGTAAAATATACCAACAATGAAGCCTA
TTTTGATGTGATTGAAGAGATTGATGCCATTATTGACAAATCAGGTTCCACAGTTACTGCTGAG
ATCCAGGGCGTGGTTGATGCCTGTGTAAAACTCACTGGAATGCCAGACCTTACACTTTCCTTTA
TGAACCCCCGGCTGTTGGATGACGTCAGCTTCCATCCTTGTGTTCGTTTCAAGCGCTGGGAGTC
AGAGCGTATTCTATCTTTCATCCCACCTGATGGAAACTTCCGTCTGCTCTCTTATCATGTCAGT
GCACAGAATCTCGTTGCAATTCCAGTGTATGTCAAACATAATATCAGTTTCCGGGACAGTAGTT
CACTTGGACGCTTTGAAATAACAGTGGGACCTAAGCAGACTATGGGGAAGACTATAGAAGGAGT
GATTGTCATCAGTCAGATGCCCAAAGGAGTGCTGAATATGAGCCTCACTCCATCCCAAGGGACA
CACACATTTGACCCAGTGACAAAGATGTTGTCTTGGGATGTAGGAAAAATAAATCCTCAAAAGC
TACCAAGTTTGAAGGGGACCATGAGTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACCCCAC
AATCAACCTGCAGTTTAAAATCCAGCAGCTGGCCATTTCTGGACTCAAAGTGAATCGTCTGGAT
ATGTATGGAGAAAAGTACAAACCCTTTAAAGGCATAAAATACATGACAAAAGCTGGAAAGTTTC
AAGTTCGAACCTGAAGGGAAAGTTTTGTAGCTGGAACACTCATGAACACTTTTTCATTTCTTAC
TTGTCTAAAAGTAAAAAATATCAGCCTGTCTCTTAGGTAAGTCCCTCCAGGACCCATCTGCTCC
CTTTTTCCTTAGCCTTCAGTGCCATGGAACTAATCAAGGGAGAAAAGAGTCACCAGGGAGAACG
GCATGGAACTGAAACACAGTCAGCACCAACTCAGTTCTCAAGAAGAGATGTATAATGGAGGGTA
GCAGTACTTGACATCTTATTTAACTATTCTTAACATGATTACCACAGAAAAAGACCAGCATTTG
TTGCTTGCTTGGCTTTAATTATCTAAAGCCACTGAAAGACTTTATAGATTTTTTTTTTAAAGTA
GAAAGATTAGAAAGAAGGGAAATTATAAGAAAAATGAATCTTAGTTAAAGAAAGCCAGTTATAG
ATCTCCGATCTTGCTTAATGGTGTGCAAGGCCCTGGGTTCAAGCCCCAGCACCACACACAACAT
GAAAAATGATCTGATCTAGGCCTGGGGATGTATCTTAGTGGTAGAATGCTTGCCTAGCATGCAC
GAGGCCCTAGGTTTGATCCCCAACACTGCAAAAATTTTAAACAAAGAAAAAAGGTCTGATCTTT
GAGAAAAAAAGAGGAAATAGTACTAAAGAAGAGTTTTGAGGAGATATATTAAAGTGAAAGATTG
GCAAGGAAAGTGATCAACCTTTACATTAAGGAGGGTTGTAAAGAAAAGAGTTGATTTCTTTCTG
ATCCCTCTGATACATAATATTGTTTATACTTCTAAAAATGAACTGGGAACTTCTTAAATTCAAG
TCCACTATTGACACAGAAAACCCAATAGAATCAGAATTTTCCTTAAAGACCGATGATATTGAGC
TAGCTTTCATATTCTTTTGCTTGCCTTTAGCACTTGGTCTGTGAGAAGGTGACCCACTTTCTTC
CCAAAATAATTCTACTCTTTTACAAAATTCACTGCCTTTCTGGTTACCTGATCCTTCCACAGGA
TTTTCTAAATAGCAGGAGTTTCAGTGCAGCCAGATTTTATGAGTCAGAGTTATTGGAGTAGCAA
TGGCAGCTCATTTCCCATTAAGGTGGATCACAGCTATAACTGAGTGATCCCATGTCTACATTTA
TCTGTGCTAGACTGGTACTAGATCCTGAGCCTTCCTGTATGAAACTTTTCCATAGGTAGAACTT
GGTAAAAATAATGCCTAGCATTGAGGACATGATAGATCCTTGAAGCTGCTTGGTAAAGTTGTCA
TTTCTTCAGTCTTTTGTTGTACTCTATAATATATTTATTAACAATAGATAGGCAAAAATTTCCC
TTAAATCTTTGAATAAAATTAATGTTGTAGGAAGCTGGACCATTTGGTCATATGTAACCAACCC
AGTTTAAGAAACAACTTAAGAAGTACTTAAGGTTTTCCAAGTGGGTAATTTTTGTTCTATTTCA
TGTGTCCATTACTTATTCAAATATCTAAGTAAAAGACAGGTTTTGTTTTTGGTTTTGGTTTTGC
TATCTTCAAAGTATAGAGTAGAGAACAATAGTGTGCTCTGCATTGTGCATGGAGAAAAAGGAAA
CCTTCACTCTCCAACTCTAGTTCTCTAAAATCCTGTTTCCAAATACTTGTGCAACTTGGTTTTT
TTTTTCTTTTTGCTAGTTTTATCTTGCTGCTTCCAGGACTTATTTGTGCTGCAGAGTAATGTTG
CTTTGTGGTTTTTCTCTGGGATAAACTGCTACATACAACCAGATGTGCTTCATACTCCATCACT
CCACACTGCAGCCTGTACACACCCACCATGGTAGAGGAAACTTTTCTGCCTGTGAATCCCAGGA
ATGTTCAGAATCACCTCTTCTGAGGGCTCTGAAAGGTTCCTAAGTCACAGGAATCAACTAATCT
TGGTCCCTGAAGATTTTGCAGCTGTTTTATGTCTTCTAGGGCAGCTTATCTTATTGCAAGGGAC
ATAACTAAGAAGAATTAAAGTCTAGACTATGGGACCTGTGGGCCTAAGCATGTGAAATAACCAT
CACATATGGGTGTAGCAGACCACTGGAGTACAATCAAGCATCACTGCCAGCTTCCCACAATGTG
TCAGGTGGCATGAATAGTTCAGGGTGCCTTAGTTGAGCTGTTCAGTTCTATGTGTGGTTAACAT
GTGCAGACGTAGCTTCTCTGTTTAAATCTTAATAAAGTTGAATTTTACCAGTC

hide sequence

RefSeq Acc Id:

XM_021720196 ⟹ XP_021575871

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,568,972 (-)	NCBI
SpeTri2.0	NW_004936785	507,169 - 525,361 (-)	NCBI

Sequence:

show sequence

CGCGCGTGGGGGTGGAGCTTGTTGGCACAGCCGAGTGGTCGGCGCTGCGAAGAGCGAGGCTGGG
TTTGAAAGTTTGCAGAATCCTGAGACTTTCCCACTGAAAAAGACTTTCCTCTTCACTGACAATT
TCCCACCATGATTCATAGTCTTTTCTTGATCAACTCCTCTGGAGATATTTTCCTGGAGAAACAT
TGGAAAAGTGTGGTCAGTCGTTCTGTTTGCGATTACTTTTTTGAGGCACAGGAAAGAGCAACTG
AGGCAGAAAATGTGCCTCCAGTTATCCCTACCCCTCACCATTATCTCTTAAGTGTTTACCGCCA
CAAGATCTTTTTTGTGGCCGTGATTCAGACTGAGGTCCCACCTCTGTTTGTCATTGAGTTCCTT
CACCGAGTAGTGGACACATTTCAGGATTATTTTGGAGTCTGTTCAGAGCCGGTGATCAAAGACA
ATGTGGTTGTGGTTTATGAGGTTTTAGAAGAGATGCTTGATAATGGGTTTCCCTTGGCTACTGA
GTCGAACATTCTCAAAGAACTGATAAAGCCTCCCACTATCCTTCGGACAGTTGTCAACACCATA
ACAGGAAGTACCAATGTGGGTGACCAACTTCCAACTGGGCAGCTGTCAGTGGTGCCTTGGCGAC
GGACTGGGGTAAAATATACCAACAATGAAGCCTATTTTGATGTGATTGAAGAGATTGATGCCAT
TATTGACAAATCAGGTTCCACAGTTACTGCTGAGATCCAGGGCGTGGTTGATGCCTGTGTAAAA
CTCACTGGAATGCCAGACCTTACACTTTCCTTTATGAACCCCCGGCTGTTGGATGACGTCAGCT
TCCATCCTTGTGTTCGTTTCAAGCGCTGGGAGTCAGAGCGTATTCTATCTTTCATCCCACCTGA
TGGAAACTTCCGTCTGCTCTCTTATCATGTCAGTGCACAGAATCTCGTTGCAATTCCAGTGTAT
GTCAAACATAATATCAGTTTCCGGGACAGTAGTTCACTTGGACGCTTTGAAATAACAGTGGGAC
CTAAGCAGACTATGGGGAAGACTATAGAAGGAGTGATTGTCATCAGTCAGATGCCCAAAGGAGT
GCTGAATATGAGCCTCACTCCATCCCAAGGGACACACACATTTGACCCAGTGACAAAGATGTTG
TCTTGGGATGTAGGAAAAATAAATCCTCAAAAGCTACCAAGTTTGAAGGGGACCATGAGTCTTC
AGGCTGGAGCTTCCAAACCAGATGAAAACCCCACAATCAACCTGCAGTTTAAAATCCAGCAGCT
GGCCATTTCTGGACTCAAAGTGAATCGTCTGGATATGTATGGAGAAAAGTACAAACCCTTTAAA
GGCATAAAATACATGACAAAAGCTGGAAAGTTTCAAGTTCGAACCTGAAGGGAAAGTTTTGTAG
CTGGAACACTCATGAACACTTTTTCATTTCTTACTTGTCTAAAAGTAAAAAATATCAGCCTGTC
TCTTAGGTAAGTCCCTCCAGGACCCATCTGCTCCCTTTTTCCTTAGCCTTCAGTGCCATGGAAC
TAATCAAGGGAGAAAAGAGTCACCAGGGAGAACGGCATGGAACTGAAACACAGTCAGCACCAAC
TCAGTTCTCAAGAAGAGATGTATAATGGAGGGTAGCAGTACTTGACATCTTATTTAACTATTCT
TAACATGATTACCACAGAAAAAGACCAGCATTTGTTGCTTGCTTGGCTTTAATTATCTAAAGCC
ACTGAAAGACTTTATAGATTTTTTTTTTAAAGTAGAAAGATTAGAAAGAAGGGAAATTATAAGA
AAAATGAATCTTAGTTAAAGAAAGCCAGTTATAGATCTCCGATCTTGCTTAATGGTGTGCAAGG
CCCTGGGTTCAAGCCCCAGCACCACACACAACATGAAAAATGATCTGATCTAGGCCTGGGGATG
TATCTTAGTGGTAGAATGCTTGCCTAGCATGCACGAGGCCCTAGGTTTGATCCCCAACACTGCA
AAAATTTTAAACAAAGAAAAAAGGTCTGATCTTTGAGAAAAAAAGAGGAAATAGTACTAAAGAA
GAGTTTTGAGGAGATATATTAAAGTGAAAGATTGGCAAGGAAAGTGATCAACCTTTACATTAAG
GAGGGTTGTAAAGAAAAGAGTTGATTTCTTTCTGATCCCTCTGATACATAATATTGTTTATACT
TCTAAAAATGAACTGGGAACTTCTTAAATTCAAGTCCACTATTGACACAGAAAACCCAATAGAA
TCAGAATTTTCCTTAAAGACCGATGATATTGAGCTAGCTTTCATATTCTTTTGCTTGCCTTTAG
CACTTGGTCTGTGAGAAGGTGACCCACTTTCTTCCCAAAATAATTCTACTCTTTTACAAAATTC
ACTGCCTTTCTGGTTACCTGATCCTTCCACAGGATTTTCTAAATAGCAGGAGTTTCAGTGCAGC
CAGATTTTATGAGTCAGAGTTATTGGAGTAGCAATGGCAGCTCATTTCCCATTAAGGTGGATCA
CAGCTATAACTGAGTGATCCCATGTCTACATTTATCTGTGCTAGACTGGTACTAGATCCTGAGC
CTTCCTGTATGAAACTTTTCCATAGGTAGAACTTGGTAAAAATAATGCCTAGCATTGAGGACAT
GATAGATCCTTGAAGCTGCTTGGTAAAGTTGTCATTTCTTCAGTCTTTTGTTGTACTCTATAAT
ATATTTATTAACAATAGATAGGCAAAAATTTCCCTTAAATCTTTGAATAAAATTAATGTTGTAG
GAAGCTGGACCATTTGGTCATATGTAACCAACCCAGTTTAAGAAACAACTTAAGAAGTACTTAA
GGTTTTCCAAGTGGGTAATTTTTGTTCTATTTCATGTGTCCATTACTTATTCAAATATCTAAGT
AAAAGACAGGTTTTGTTTTTGGTTTTGGTTTTGCTATCTTCAAAGTATAGAGTAGAGAACAATA
GTGTGCTCTGCATTGTGCATGGAGAAAAAGGAAACCTTCACTCTCCAACTCTAGTTCTCTAAAA
TCCTGTTTCCAAATACTTGTGCAACTTGGTTTTTTTTTTCTTTTTGCTAGTTTTATCTTGCTGC
TTCCAGGACTTATTTGTGCTGCAGAGTAATGTTGCTTTGTGGTTTTTCTCTGGGATAAACTGCT
ACATACAACCAGATGTGCTTCATACTCCATCACTCCACACTGCAGCCTGTACACACCCACCATG
GTAGAGGAAACTTTTCTGCCTGTGAATCCCAGGAATGTTCAGAATCACCTCTTCTGAGGGCTCT
GAAAGGTTCCTAAGTCACAGGAATCAACTAATCTTGGTCCCTGAAGATTTTGCAGCTGTTTTAT
GTCTTCTAGGGCAGCTTATCTTATTGCAAGGGACATAACTAAGAAGAATTAAAGTCTAGACTAT
GGGACCTGTGGGCCTAAGCATGTGAAATAACCATCACATATGGGTGTAGCAGACCACTGGAGTA
CAATCAAGCATCACTGCCAGCTTCCCACAATGTGTCAGGTGGCATGAATAGTTCAGGGTGCCTT
AGTTGAGCTGTTCAGTTCTATGTGTGGTTAACATGTGCAGACGTAGCTTCTCTGTTTAAATCTT
AATAAAGTTGAATTTTACCAGTC

hide sequence

RefSeq Acc Id:

XM_021720197 ⟹ XP_021575872

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,568,654 (-)	NCBI
SpeTri2.0	NW_004936785	507,169 - 525,111 (-)	NCBI

Sequence:

show sequence

CCGGATGGTGGAGGGAGGAGGGGACCCTGTTACCATGGCAACACATGGGTGCAAAGTGGAAGGC
CCCGGTTCCTGAACCCTGTTTACCCCCGGAATGTGCGTTTACCTTAAATCTACCCCGTGCCTTC
CTCACCGTGGCTCGCGGGGTCCTAGGCTGGGACCATCGCAGAAATAACCCACTTTGGCCTCCTT
CTCCGCAGCCTCGCCATTCTCCACCCTCCCTCCCTCACTCCCTCCCTCCCTCCTGCAGTCGAGT
CCACCGGCAGAGGGATTAAGCTTGCCCTGGCGTACTCGGTACAGCAGGCCTTTGCGGTGCGATC
ACCTGGGCTAATAGCCACAGTTGGGGTCCCTCGCGGCTGCCTCATTCTGGCGACTGGAGCCGTG
GAGATTCCGCCGTCAGAGGTTTGAAAGTTTGCAGAATCCTGAGACTTTCCCACTGAAAAAGACT
TTCCTCTTCACTGACAATTTCCCACCATGATTCATAGTCTTTTCTTGATCAACTCCTCTGGAGA
TATTTTCCTGGAGAAACATTGGAAAAGTGTGGTCAGTCGTTCTGTTTGCGATTACTTTTTTGAG
GCACAGGAAAGAGCAACTGAGGCAGAAAATGTGCCTCCAGTTATCCCTACCCCTCACCATTATC
TCTTAAGTGTTTACCGCCACAAGATCTTTTTTGTGGCCGTGATTCAGACTGAGGTCCCACCTCT
GTTTGTCATTGAGTTCCTTCACCGAGTAGTGGACACATTTCAGGATTATTTTGGAGTCTGTTCA
GAGCCGGTGATCAAAGACAATGTGGTTGTGGTTTATGAGGTTTTAGAAGAGATGCTTGATAATG
GGTTTCCCTTGGCTACTGAGTCGAACATTCTCAAAGAACTGATAAAGCCTCCCACTATCCTTCG
GACAGTTGTCAACACCATAACAGGAAGTACCAATGTGGGTGACCAACTTCCAACTGGGCAGCTG
TCAGTGGTGCCTTGGCGACGGACTGGGGTAAAATATACCAACAATGAAGCCTATTTTGATGTGA
TTGAAGAGATTGATGCCATTATTGACAAATCAGGTTCCACAGTTACTGCTGAGATCCAGGGCGT
GGTTGATGCCTGTGTAAAACTCACTGGAATGCCAGACCTTACACTTTCCTTTATGAACCCCCGG
CTGTTGGATGACGTCAGCTTCCATCCTTGTGTTCGTTTCAAGCGCTGGGAGTCAGAGCGTATTC
TATCTTTCATCCCACCTGATGGAAACTTCCGTCTGCTCTCTTATCATGTCAGTGCACAGAATCT
CGTTGCAATTCCAGTGTATGTCAAACATAATATCAGTTTCCGGGACAGTAGTTCACTTGGACGC
TTTGAAATAACAGTGGGACCTAAGCAGACTATGGGGAAGACTATAGAAGGAGTGATTGTCATCA
GTCAGATGCCCAAAGGAGTGCTGAATATGAGCCTCACTCCATCCCAAGGGACACACACATTTGA
CCCAGTGACAAAGATGTTGTCTTGGGATGTAGGAAAAATAAATCCTCAAAAGCTACCAAGTTTG
AAGGGGACCATGAGTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACAATCAACCTGC
AGTTTAAAATCCAGCAGCTGGCCATTTCTGGACTCAAAGTGAATCGTCTGGATATGTATGGAGA
AAAGTACAAACCCTTTAAAGGCATAAAATACATGACAAAAGCTGGAAAGTTTCAAGTTCGAACC
TGAAGGGAAAGTTTTGTAGCTGGAACACTCATGAACACTTTTTCATTTCTTACTTGTCTAAAAG
TAAAAAATATCAGCCTGTCTCTTAGGTAAGTCCCTCCAGGACCCATCTGCTCCCTTTTTCCTTA
GCCTTCAGTGCCATGGAACTAATCAAGGGAGAAAAGAGTCACCAGGGAGAACGGCATGGAACTG
AAACACAGTCAGCACCAACTCAGTTCTCAAGAAGAGATGTATAATGGAGGGTAGCAGTACTTGA
CATCTTATTTAACTATTCTTAACATGATTACCACAGAAAAAGACCAGCATTTGTTGCTTGCTTG
GCTTTAATTATCTAAAGCCACTGAAAGACTTTATAGATTTTTTTTTTAAAGTAGAAAGATTAGA
AAGAAGGGAAATTATAAGAAAAATGAATCTTAGTTAAAGAAAGCCAGTTATAGATCTCCGATCT
TGCTTAATGGTGTGCAAGGCCCTGGGTTCAAGCCCCAGCACCACACACAACATGAAAAATGATC
TGATCTAGGCCTGGGGATGTATCTTAGTGGTAGAATGCTTGCCTAGCATGCACGAGGCCCTAGG
TTTGATCCCCAACACTGCAAAAATTTTAAACAAAGAAAAAAGGTCTGATCTTTGAGAAAAAAAG
AGGAAATAGTACTAAAGAAGAGTTTTGAGGAGATATATTAAAGTGAAAGATTGGCAAGGAAAGT
GATCAACCTTTACATTAAGGAGGGTTGTAAAGAAAAGAGTTGATTTCTTTCTGATCCCTCTGAT
ACATAATATTGTTTATACTTCTAAAAATGAACTGGGAACTTCTTAAATTCAAGTCCACTATTGA
CACAGAAAACCCAATAGAATCAGAATTTTCCTTAAAGACCGATGATATTGAGCTAGCTTTCATA
TTCTTTTGCTTGCCTTTAGCACTTGGTCTGTGAGAAGGTGACCCACTTTCTTCCCAAAATAATT
CTACTCTTTTACAAAATTCACTGCCTTTCTGGTTACCTGATCCTTCCACAGGATTTTCTAAATA
GCAGGAGTTTCAGTGCAGCCAGATTTTATGAGTCAGAGTTATTGGAGTAGCAATGGCAGCTCAT
TTCCCATTAAGGTGGATCACAGCTATAACTGAGTGATCCCATGTCTACATTTATCTGTGCTAGA
CTGGTACTAGATCCTGAGCCTTCCTGTATGAAACTTTTCCATAGGTAGAACTTGGTAAAAATAA
TGCCTAGCATTGAGGACATGATAGATCCTTGAAGCTGCTTGGTAAAGTTGTCATTTCTTCAGTC
TTTTGTTGTACTCTATAATATATTTATTAACAATAGATAGGCAAAAATTTCCCTTAAATCTTTG
AATAAAATTAATGTTGTAGGAAGCTGGACCATTTGGTCATATGTAACCAACCCAGTTTAAGAAA
CAACTTAAGAAGTACTTAAGGTTTTCCAAGTGGGTAATTTTTGTTCTATTTCATGTGTCCATTA
CTTATTCAAATATCTAAGTAAAAGACAGGTTTTGTTTTTGGTTTTGGTTTTGCTATCTTCAAAG
TATAGAGTAGAGAACAATAGTGTGCTCTGCATTGTGCATGGAGAAAAAGGAAACCTTCACTCTC
CAACTCTAGTTCTCTAAAATCCTGTTTCCAAATACTTGTGCAACTTGGTTTTTTTTTTCTTTTT
GCTAGTTTTATCTTGCTGCTTCCAGGACTTATTTGTGCTGCAGAGTAATGTTGCTTTGTGGTTT
TTCTCTGGGATAAACTGCTACATACAACCAGATGTGCTTCATACTCCATCACTCCACACTGCAG
CCTGTACACACCCACCATGGTAGAGGAAACTTTTCTGCCTGTGAATCCCAGGAATGTTCAGAAT
CACCTCTTCTGAGGGCTCTGAAAGGTTCCTAAGTCACAGGAATCAACTAATCTTGGTCCCTGAA
GATTTTGCAGCTGTTTTATGTCTTCTAGGGCAGCTTATCTTATTGCAAGGGACATAACTAAGAA
GAATTAAAGTCTAGACTATGGGACCTGTGGGCCTAAGCATGTGAAATAACCATCACATATGGGT
GTAGCAGACCACTGGAGTACAATCAAGCATCACTGCCAGCTTCCCACAATGTGTCAGGTGGCAT
GAATAGTTCAGGGTGCCTTAGTTGAGCTGTTCAGTTCTATGTGTGGTTAACATGTGCAGACGTA
GCTTCTCTGTTTAAATCTTAATAAAGTTGAATTTTACCAGTC

hide sequence

RefSeq Acc Id:

XM_021720198 ⟹ XP_021575873

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,568,883 (-)	NCBI
SpeTri2.0	NW_004936785	507,169 - 525,220 (-)	NCBI

Sequence:

show sequence

CGGGCAGAGGCGCGGGGTGGCGCCGGACGGACTGACCCTTAGAGCTTCGGCCAGCAGTGGGGTG
AGCCTCGCCATTCTCCACCCTCCCTCCCTCACTCCCTCCCTCCCTCCTGCAGTCGAGTCCACCG
GCAGAGGGATTAAGCTTGCCCTGGCGTACTCGGTACAGCAGGCCTTTGCGGTGCGATCACCTGG
GCTAATAGCCACAGTTGGGGTCCCTCGCGGCTGCCTCATTCTGGCGACTGGAGCCGTGGAGATT
CCGCCGTCAGAGGTTTGAAAGTTTGCAGAATCCTGAGACTTTCCCACTGAAAAAGACTTTCCTC
TTCACTGACAATTTCCCACCATGATTCATAGTCTTTTCTTGATCAACTCCTCTGGAGATATTTT
CCTGGAGAAACATTGGAAAAGTGTGGTCAGTCGTTCTGTTTGCGATTACTTTTTTGAGGCACAG
GAAAGAGCAACTGAGGCAGAAAATGTGCCTCCAGTTATCCCTACCCCTCACCATTATCTCTTAA
GTGTTTACCGCCACAAGATCTTTTTTGTGGCCGTGATTCAGACTGAGGTCCCACCTCTGTTTGT
CATTGAGTTCCTTCACCGAGTAGTGGACACATTTCAGGATTATTTTGGAGTCTGTTCAGAGCCG
GTGATCAAAGACAATGTGGTTGTGGTTTATGAGGTTTTAGAAGAGATGCTTGATAATGGGTTTC
CCTTGGCTACTGAGTCGAACATTCTCAAAGAACTGATAAAGCCTCCCACTATCCTTCGGACAGT
TGTCAACACCATAACAGGAAGTACCAATGTGGGTGACCAACTTCCAACTGGGCAGCTGTCAGTG
GTGCCTTGGCGACGGACTGGGGTAAAATATACCAACAATGAAGCCTATTTTGATGTGATTGAAG
AGATTGATGCCATTATTGACAAATCAGGTTCCACAGTTACTGCTGAGATCCAGGGCGTGGTTGA
TGCCTGTGTAAAACTCACTGGAATGCCAGACCTTACACTTTCCTTTATGAACCCCCGGCTGTTG
GATGACGTCAGCTTCCATCCTTGTGTTCGTTTCAAGCGCTGGGAGTCAGAGCGTATTCTATCTT
TCATCCCACCTGATGGAAACTTCCGTCTGCTCTCTTATCATGTCAGTGCACAGAATCTCGTTGC
AATTCCAGTGTATGTCAAACATAATATCAGTTTCCGGGACAGTAGTTCACTTGGACGCTTTGAA
ATAACAGTGGGACCTAAGCAGACTATGGGGAAGACTATAGAAGGAGTGATTGTCATCAGTCAGA
TGCCCAAAGGAGTGCTGAATATGAGCCTCACTCCATCCCAAGGGACACACACATTTGACCCAGT
GACAAAGATGTTGTCTTGGGATGTAGGAAAAATAAATCCTCAAAAGCTACCAAGTTTGAAGGGG
ACCATGAGTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACAATCAACCTGCAGTTTA
AAATCCAGCAGCTGGCCATTTCTGGACTCAAAGTGAATCGTCTGGATATGTATGGAGAAAAGTA
CAAACCCTTTAAAGGCATAAAATACATGACAAAAGCTGGAAAGTTTCAAGTTCGAACCTGAAGG
GAAAGTTTTGTAGCTGGAACACTCATGAACACTTTTTCATTTCTTACTTGTCTAAAAGTAAAAA
ATATCAGCCTGTCTCTTAGGTAAGTCCCTCCAGGACCCATCTGCTCCCTTTTTCCTTAGCCTTC
AGTGCCATGGAACTAATCAAGGGAGAAAAGAGTCACCAGGGAGAACGGCATGGAACTGAAACAC
AGTCAGCACCAACTCAGTTCTCAAGAAGAGATGTATAATGGAGGGTAGCAGTACTTGACATCTT
ATTTAACTATTCTTAACATGATTACCACAGAAAAAGACCAGCATTTGTTGCTTGCTTGGCTTTA
ATTATCTAAAGCCACTGAAAGACTTTATAGATTTTTTTTTTAAAGTAGAAAGATTAGAAAGAAG
GGAAATTATAAGAAAAATGAATCTTAGTTAAAGAAAGCCAGTTATAGATCTCCGATCTTGCTTA
ATGGTGTGCAAGGCCCTGGGTTCAAGCCCCAGCACCACACACAACATGAAAAATGATCTGATCT
AGGCCTGGGGATGTATCTTAGTGGTAGAATGCTTGCCTAGCATGCACGAGGCCCTAGGTTTGAT
CCCCAACACTGCAAAAATTTTAAACAAAGAAAAAAGGTCTGATCTTTGAGAAAAAAAGAGGAAA
TAGTACTAAAGAAGAGTTTTGAGGAGATATATTAAAGTGAAAGATTGGCAAGGAAAGTGATCAA
CCTTTACATTAAGGAGGGTTGTAAAGAAAAGAGTTGATTTCTTTCTGATCCCTCTGATACATAA
TATTGTTTATACTTCTAAAAATGAACTGGGAACTTCTTAAATTCAAGTCCACTATTGACACAGA
AAACCCAATAGAATCAGAATTTTCCTTAAAGACCGATGATATTGAGCTAGCTTTCATATTCTTT
TGCTTGCCTTTAGCACTTGGTCTGTGAGAAGGTGACCCACTTTCTTCCCAAAATAATTCTACTC
TTTTACAAAATTCACTGCCTTTCTGGTTACCTGATCCTTCCACAGGATTTTCTAAATAGCAGGA
GTTTCAGTGCAGCCAGATTTTATGAGTCAGAGTTATTGGAGTAGCAATGGCAGCTCATTTCCCA
TTAAGGTGGATCACAGCTATAACTGAGTGATCCCATGTCTACATTTATCTGTGCTAGACTGGTA
CTAGATCCTGAGCCTTCCTGTATGAAACTTTTCCATAGGTAGAACTTGGTAAAAATAATGCCTA
GCATTGAGGACATGATAGATCCTTGAAGCTGCTTGGTAAAGTTGTCATTTCTTCAGTCTTTTGT
TGTACTCTATAATATATTTATTAACAATAGATAGGCAAAAATTTCCCTTAAATCTTTGAATAAA
ATTAATGTTGTAGGAAGCTGGACCATTTGGTCATATGTAACCAACCCAGTTTAAGAAACAACTT
AAGAAGTACTTAAGGTTTTCCAAGTGGGTAATTTTTGTTCTATTTCATGTGTCCATTACTTATT
CAAATATCTAAGTAAAAGACAGGTTTTGTTTTTGGTTTTGGTTTTGCTATCTTCAAAGTATAGA
GTAGAGAACAATAGTGTGCTCTGCATTGTGCATGGAGAAAAAGGAAACCTTCACTCTCCAACTC
TAGTTCTCTAAAATCCTGTTTCCAAATACTTGTGCAACTTGGTTTTTTTTTTCTTTTTGCTAGT
TTTATCTTGCTGCTTCCAGGACTTATTTGTGCTGCAGAGTAATGTTGCTTTGTGGTTTTTCTCT
GGGATAAACTGCTACATACAACCAGATGTGCTTCATACTCCATCACTCCACACTGCAGCCTGTA
CACACCCACCATGGTAGAGGAAACTTTTCTGCCTGTGAATCCCAGGAATGTTCAGAATCACCTC
TTCTGAGGGCTCTGAAAGGTTCCTAAGTCACAGGAATCAACTAATCTTGGTCCCTGAAGATTTT
GCAGCTGTTTTATGTCTTCTAGGGCAGCTTATCTTATTGCAAGGGACATAACTAAGAAGAATTA
AAGTCTAGACTATGGGACCTGTGGGCCTAAGCATGTGAAATAACCATCACATATGGGTGTAGCA
GACCACTGGAGTACAATCAAGCATCACTGCCAGCTTCCCACAATGTGTCAGGTGGCATGAATAG
TTCAGGGTGCCTTAGTTGAGCTGTTCAGTTCTATGTGTGGTTAACATGTGCAGACGTAGCTTCT
CTGTTTAAATCTTAATAAAGTTGAATTTTACCAGTC

hide sequence

RefSeq Acc Id:

XM_021720199 ⟹ XP_021575874

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,568,782 (-)	NCBI
SpeTri2.0	NW_004936785	507,169 - 525,222 (-)	NCBI

Sequence:

show sequence

GGCGGGCAGAGGCGCGGGGTGGCGCCGGACGGACTGACCCTTAGAGCTTCGGCCAGCAGTGGGG
TGAGGTTTGAAAGTTTGCAGAATCCTGAGACTTTCCCACTGAAAAAGACTTTCCTCTTCACTGA
CAATTTCCCACCATGATTCATAGTCTTTTCTTGATCAACTCCTCTGGAGATATTTTCCTGGAGA
AACATTGGAAAAGTGTGGTCAGTCGTTCTGTTTGCGATTACTTTTTTGAGGCACAGGAAAGAGC
AACTGAGGCAGAAAATGTGCCTCCAGTTATCCCTACCCCTCACCATTATCTCTTAAGTGTTTAC
CGCCACAAGATCTTTTTTGTGGCCGTGATTCAGACTGAGGTCCCACCTCTGTTTGTCATTGAGT
TCCTTCACCGAGTAGTGGACACATTTCAGGATTATTTTGGAGTCTGTTCAGAGCCGGTGATCAA
AGACAATGTGGTTGTGGTTTATGAGGTTTTAGAAGAGATGCTTGATAATGGGTTTCCCTTGGCT
ACTGAGTCGAACATTCTCAAAGAACTGATAAAGCCTCCCACTATCCTTCGGACAGTTGTCAACA
CCATAACAGGAAGTACCAATGTGGGTGACCAACTTCCAACTGGGCAGCTGTCAGTGGTGCCTTG
GCGACGGACTGGGGTAAAATATACCAACAATGAAGCCTATTTTGATGTGATTGAAGAGATTGAT
GCCATTATTGACAAATCAGGTTCCACAGTTACTGCTGAGATCCAGGGCGTGGTTGATGCCTGTG
TAAAACTCACTGGAATGCCAGACCTTACACTTTCCTTTATGAACCCCCGGCTGTTGGATGACGT
CAGCTTCCATCCTTGTGTTCGTTTCAAGCGCTGGGAGTCAGAGCGTATTCTATCTTTCATCCCA
CCTGATGGAAACTTCCGTCTGCTCTCTTATCATGTCAGTGCACAGAATCTCGTTGCAATTCCAG
TGTATGTCAAACATAATATCAGTTTCCGGGACAGTAGTTCACTTGGACGCTTTGAAATAACAGT
GGGACCTAAGCAGACTATGGGGAAGACTATAGAAGGAGTGATTGTCATCAGTCAGATGCCCAAA
GGAGTGCTGAATATGAGCCTCACTCCATCCCAAGGGACACACACATTTGACCCAGTGACAAAGA
TGTTGTCTTGGGATGTAGGAAAAATAAATCCTCAAAAGCTACCAAGTTTGAAGGGGACCATGAG
TCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACAATCAACCTGCAGTTTAAAATCCAG
CAGCTGGCCATTTCTGGACTCAAAGTGAATCGTCTGGATATGTATGGAGAAAAGTACAAACCCT
TTAAAGGCATAAAATACATGACAAAAGCTGGAAAGTTTCAAGTTCGAACCTGAAGGGAAAGTTT
TGTAGCTGGAACACTCATGAACACTTTTTCATTTCTTACTTGTCTAAAAGTAAAAAATATCAGC
CTGTCTCTTAGGTAAGTCCCTCCAGGACCCATCTGCTCCCTTTTTCCTTAGCCTTCAGTGCCAT
GGAACTAATCAAGGGAGAAAAGAGTCACCAGGGAGAACGGCATGGAACTGAAACACAGTCAGCA
CCAACTCAGTTCTCAAGAAGAGATGTATAATGGAGGGTAGCAGTACTTGACATCTTATTTAACT
ATTCTTAACATGATTACCACAGAAAAAGACCAGCATTTGTTGCTTGCTTGGCTTTAATTATCTA
AAGCCACTGAAAGACTTTATAGATTTTTTTTTTAAAGTAGAAAGATTAGAAAGAAGGGAAATTA
TAAGAAAAATGAATCTTAGTTAAAGAAAGCCAGTTATAGATCTCCGATCTTGCTTAATGGTGTG
CAAGGCCCTGGGTTCAAGCCCCAGCACCACACACAACATGAAAAATGATCTGATCTAGGCCTGG
GGATGTATCTTAGTGGTAGAATGCTTGCCTAGCATGCACGAGGCCCTAGGTTTGATCCCCAACA
CTGCAAAAATTTTAAACAAAGAAAAAAGGTCTGATCTTTGAGAAAAAAAGAGGAAATAGTACTA
AAGAAGAGTTTTGAGGAGATATATTAAAGTGAAAGATTGGCAAGGAAAGTGATCAACCTTTACA
TTAAGGAGGGTTGTAAAGAAAAGAGTTGATTTCTTTCTGATCCCTCTGATACATAATATTGTTT
ATACTTCTAAAAATGAACTGGGAACTTCTTAAATTCAAGTCCACTATTGACACAGAAAACCCAA
TAGAATCAGAATTTTCCTTAAAGACCGATGATATTGAGCTAGCTTTCATATTCTTTTGCTTGCC
TTTAGCACTTGGTCTGTGAGAAGGTGACCCACTTTCTTCCCAAAATAATTCTACTCTTTTACAA
AATTCACTGCCTTTCTGGTTACCTGATCCTTCCACAGGATTTTCTAAATAGCAGGAGTTTCAGT
GCAGCCAGATTTTATGAGTCAGAGTTATTGGAGTAGCAATGGCAGCTCATTTCCCATTAAGGTG
GATCACAGCTATAACTGAGTGATCCCATGTCTACATTTATCTGTGCTAGACTGGTACTAGATCC
TGAGCCTTCCTGTATGAAACTTTTCCATAGGTAGAACTTGGTAAAAATAATGCCTAGCATTGAG
GACATGATAGATCCTTGAAGCTGCTTGGTAAAGTTGTCATTTCTTCAGTCTTTTGTTGTACTCT
ATAATATATTTATTAACAATAGATAGGCAAAAATTTCCCTTAAATCTTTGAATAAAATTAATGT
TGTAGGAAGCTGGACCATTTGGTCATATGTAACCAACCCAGTTTAAGAAACAACTTAAGAAGTA
CTTAAGGTTTTCCAAGTGGGTAATTTTTGTTCTATTTCATGTGTCCATTACTTATTCAAATATC
TAAGTAAAAGACAGGTTTTGTTTTTGGTTTTGGTTTTGCTATCTTCAAAGTATAGAGTAGAGAA
CAATAGTGTGCTCTGCATTGTGCATGGAGAAAAAGGAAACCTTCACTCTCCAACTCTAGTTCTC
TAAAATCCTGTTTCCAAATACTTGTGCAACTTGGTTTTTTTTTTCTTTTTGCTAGTTTTATCTT
GCTGCTTCCAGGACTTATTTGTGCTGCAGAGTAATGTTGCTTTGTGGTTTTTCTCTGGGATAAA
CTGCTACATACAACCAGATGTGCTTCATACTCCATCACTCCACACTGCAGCCTGTACACACCCA
CCATGGTAGAGGAAACTTTTCTGCCTGTGAATCCCAGGAATGTTCAGAATCACCTCTTCTGAGG
GCTCTGAAAGGTTCCTAAGTCACAGGAATCAACTAATCTTGGTCCCTGAAGATTTTGCAGCTGT
TTTATGTCTTCTAGGGCAGCTTATCTTATTGCAAGGGACATAACTAAGAAGAATTAAAGTCTAG
ACTATGGGACCTGTGGGCCTAAGCATGTGAAATAACCATCACATATGGGTGTAGCAGACCACTG
GAGTACAATCAAGCATCACTGCCAGCTTCCCACAATGTGTCAGGTGGCATGAATAGTTCAGGGT
GCCTTAGTTGAGCTGTTCAGTTCTATGTGTGGTTAACATGTGCAGACGTAGCTTCTCTGTTTAA
ATCTTAATAAAGTTGAATTTTACCAGTC

hide sequence

RefSeq Acc Id:

XM_040268408 ⟹ XP_040124342

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,569,288 (-)	NCBI

RefSeq Acc Id:

XM_040268412 ⟹ XP_040124346

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,569,288 (-)	NCBI

RefSeq Acc Id:

XR_005726172

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,547,219 - 46,569,288 (-)	NCBI

RefSeq Acc Id:

XR_005726175

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	46,550,773 - 46,569,288 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005340369	(Get FASTA)	NCBI Sequence Viewer
	XP_021575871	(Get FASTA)	NCBI Sequence Viewer
	XP_021575872	(Get FASTA)	NCBI Sequence Viewer
	XP_021575873	(Get FASTA)	NCBI Sequence Viewer
	XP_021575874	(Get FASTA)	NCBI Sequence Viewer
	XP_040124342	(Get FASTA)	NCBI Sequence Viewer
	XP_040124346	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000008677.2
	ENSSTOP00000024944.1
GenBank Protein	KAG3294753	(Get FASTA)	NCBI Sequence Viewer
	KAG3294754	(Get FASTA)	NCBI Sequence Viewer
	KAG3294755	(Get FASTA)	NCBI Sequence Viewer
	KAG3294756	(Get FASTA)	NCBI Sequence Viewer
	KAG3294757	(Get FASTA)	NCBI Sequence Viewer
	KAG3294758	(Get FASTA)	NCBI Sequence Viewer
	KAG3294759	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005340369 ⟸ XM_005340312
- Peptide Label:	isoform X3
- UniProtKB:	I3ME05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKI FFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESN ILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID KSGSTVTAEIQGVVDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGN FRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVIVISQMPKGVLN MSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAI SGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT hide sequence

RefSeq Acc Id:	XP_021575871 ⟸ XM_021720196
- Peptide Label:	isoform X3
- UniProtKB:	I3ME05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKI FFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESN ILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID KSGSTVTAEIQGVVDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGN FRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVIVISQMPKGVLN MSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAI SGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT hide sequence

RefSeq Acc Id:	XP_021575874 ⟸ XM_021720199
- Peptide Label:	isoform X3
- UniProtKB:	I3ME05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKI FFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESN ILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID KSGSTVTAEIQGVVDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGN FRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVIVISQMPKGVLN MSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAI SGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT hide sequence

RefSeq Acc Id:	XP_021575873 ⟸ XM_021720198
- Peptide Label:	isoform X3
- UniProtKB:	I3ME05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKI FFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESN ILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID KSGSTVTAEIQGVVDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGN FRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVIVISQMPKGVLN MSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAI SGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT hide sequence

RefSeq Acc Id:	XP_021575872 ⟸ XM_021720197
- Peptide Label:	isoform X3
- UniProtKB:	I3ME05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKI FFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESN ILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID KSGSTVTAEIQGVVDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGN FRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVIVISQMPKGVLN MSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAI SGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT hide sequence

RefSeq Acc Id:	XP_040124346 ⟸ XM_040268412
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040124342 ⟸ XM_040268408
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSSTOP00000024944 ⟸ ENSSTOT00000037105

RefSeq Acc Id:

ENSSTOP00000008677 ⟸ ENSSTOT00000009672

Protein Domains

MHD

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000009669	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000009672.3	UniProtKB/TrEMBL
	ENSSTOT00000037105.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.450.60	UniProtKB/TrEMBL
	Mu homology domain, subdomain B	UniProtKB/TrEMBL
InterPro	AP2_Mu_C_sf	UniProtKB/TrEMBL
	AP_mu_sigma_su	UniProtKB/TrEMBL
	Clathrin_mu	UniProtKB/TrEMBL
	Clathrin_mu_CS	UniProtKB/TrEMBL
	Longin-like_dom_sf	UniProtKB/TrEMBL
	MHD	UniProtKB/TrEMBL
NCBI Gene	Ap3m2	ENTREZGENE
PANTHER	AP COMPLEX SUBUNIT MU	UniProtKB/TrEMBL
	AP-3 COMPLEX SUBUNIT MU-2	UniProtKB/TrEMBL
Pfam	Adap_comp_sub	UniProtKB/TrEMBL
	Clat_adaptor_s	UniProtKB/TrEMBL
PIRSF	Clathrin_mu	UniProtKB/TrEMBL
PRINTS	CLATHRINADPT	UniProtKB/TrEMBL
PROSITE	CLAT_ADAPTOR_M_1	UniProtKB/TrEMBL
	CLAT_ADAPTOR_M_2	UniProtKB/TrEMBL
	MHD	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49447	UniProtKB/TrEMBL
	SSF64356	UniProtKB/TrEMBL
UniProt	I3ME05	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-05-01	Ap3m2	adaptor related protein complex 3 subunit mu 2		adaptor related protein complex 3 mu 2 subunit	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar