Nlrx1 (NLR family member X1) - Rat Genome Database

Name: Nlrx1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Nlrx1 (NLR family member X1) Ictidomys tridecemlineatus

Analyze

Symbol:

Nlrx1

Name:

NLR family member X1

RGD ID:

12438298

Description:

INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH CD3epsilon deficiency (ortholog); Chromosome 11, Partial Trisomy 11q (ortholog); congenital disorder of glycosylation Ij (ortholog); FOUND IN mitochondrion (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

NLR family member X1, transcript variant X1; NLR family member X1, transcript variant X2; NLR family member X1, transcript variant X3; NLR family member X1, transcript variant X4; NLR family member X1, transcript variant X5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NLRX1 (NLR family member X1)	NCBI	Ortholog
Mus musculus (house mouse):	Nlrx1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nlrx1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nlrx1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NLRX1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NLRX1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NLRX1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NLRX1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nlrx1 (NLR family member X1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,187,565 - 101,199,769 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,109,136 - 4,122,978 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,105,980 - 4,121,176 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

CD3epsilon deficiency (ISO)

Chromosome 11, Partial Trisomy 11q (ISO)

congenital disorder of glycosylation Ij (ISO)

congenital myasthenic syndrome 13 (ISO)

Dwarfism (ISO)

immunodeficiency 17 (ISO)

immunodeficiency 18 (ISO)

immunodeficiency 19 (ISO)

inflammatory bowel disease 28 (ISO)

isolated microphthalmia 5 (ISO)

long QT syndrome (ISO)

long QT syndrome 10 (ISO)

RASopathy (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of canonical NF-kappaB signal transduction (IEA,ISO)

negative regulation of inflammatory response (IEA,ISO)

negative regulation of innate immune response (IEA,ISO)

negative regulation of interferon-beta production (IEA,ISO)

negative regulation of interleukin-6 production (IEA,ISO)

negative regulation of macrophage cytokine production (IEA,ISO)

negative regulation of RIG-I signaling pathway (IEA,ISO)

regulation of innate immune response (IEA)

Cellular Component

mitochondrion (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Nlrx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,187,565 - 101,199,769 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,109,136 - 4,122,978 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,105,980 - 4,121,176 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NLRX1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	119,168,334 - 119,184,016 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	119,166,568 - 119,184,016 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	119,039,043 - 119,054,725 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	118,544,650 - 118,559,935 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	116,199,239 - 116,214,520 (+)	NCBI		Celera
Cytogenetic Map	11	q23.3	NCBI
HuRef	11	114,978,864 - 114,994,189 (+)	NCBI		HuRef
CHM1_1	11	118,925,713 - 118,940,992 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	119,188,702 - 119,204,385 (+)	NCBI		T2T-CHM13v2.0

Nlrx1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	44,164,010 - 44,179,896 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	44,164,014 - 44,179,896 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	44,252,713 - 44,268,599 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	44,252,717 - 44,268,599 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	44,060,796 - 44,076,682 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	44,510,207 - 44,524,609 (-)	NCBI		MGSCv36	mm8
MGSCv36	9	44,003,712 - 44,019,393 (-)	NCBI		MGSCv36	mm8
Celera	9	41,516,710 - 41,519,423 (-)	NCBI		Celera
Cytogenetic Map	9	A5.2	NCBI
cM Map	9	24.84	NCBI

Nlrx1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	53,486,866 - 53,503,498 (-)	NCBI		GRCr8
mRatBN7.2	8	44,588,476 - 44,606,678 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	44,590,048 - 44,606,484 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	50,085,296 - 50,102,169 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	48,364,014 - 48,380,887 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	46,234,836 - 46,251,261 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	48,583,559 - 48,600,203 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	48,584,071 - 48,597,867 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	47,202,115 - 47,218,306 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	47,230,800 - 47,246,976 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	47,239,565 - 47,255,742 (-)	NCBI
Celera	8	44,176,760 - 44,192,570 (-)	NCBI		Celera
Cytogenetic Map	8	q22	NCBI

Nlrx1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	20,275,917 - 20,287,414 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	20,275,767 - 20,287,414 (+)	NCBI	ChiLan1.0	ChiLan1.0

NLRX1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	119,874,015 - 119,889,315 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	120,977,701 - 120,993,007 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	114,007,415 - 114,022,712 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	117,935,341 - 117,950,728 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	117,935,444 - 117,950,728 (+)	Ensembl	panpan1.1		panPan2

NLRX1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	14,692,621 - 14,705,214 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	14,564,935 - 14,705,257 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	14,745,724 - 14,758,327 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	14,635,986 - 14,648,591 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	14,509,217 - 14,648,560 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	14,774,069 - 14,786,677 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	14,678,275 - 14,690,875 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	14,718,488 - 14,731,104 (-)	NCBI		UU_Cfam_GSD_1.0

NLRX1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,384,948 - 46,400,983 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,384,373 - 46,400,752 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,420,072 - 51,435,898 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NLRX1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	110,541,777 - 110,559,846 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	110,545,190 - 110,560,149 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	15,474,057 - 15,492,227 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nlrx1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	14,549,834 - 14,563,398 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	14,549,926 - 14,564,028 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013359977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000014480 ⟹ ENSSTOP00000012972

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936542	4,111,115 - 4,120,616 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000036022 ⟹ ENSSTOP00000030193

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936542	4,109,136 - 4,122,978 (+)	Ensembl

RefSeq Acc Id:

XM_013359977 ⟹ XP_013215431

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,187,565 - 101,199,769 (+)	NCBI
SpeTri2.0	NW_004936542	4,108,977 - 4,121,176 (+)	NCBI

Sequence:

show sequence

GCAGGAGTCTCCGCCCTGCGCGCGGCTCTCAAGGGCCTCCTCGGTCCGGACCCCGCAGCCCTAG
CGCCTCTGCTCGCCTGCTCAGGGGAACTGGAGAGCAGGTGGTAAGTCTCCCAGGCTCTGACCTT
CTCTCCCAGGATGAGGTGGGGCTGCTATTTGCCCAGAGCTTCTTGGTACTCTGGTCTGGGAAGA
ACATCTCAGCCACCAGATGAGTGTCTCCCCTTCCTGACACACTGGAGTTGGCCCCTTAAAGGGG
AGCGTCCCCTTGAACCCCTTAGGGCCTTTATACGCCACCATGGAAGCTCAGCGGACAGTGCTTC
CCCATCAGGAAGACATGGACAGGTGTTCCGGAGCATCTCTGCAGCTGAAGCTATCCAGCGGCAC
CGCAGGAATCTGGCAGAGTGGTTCATCCGGCTGCCCAGGGAGGAACGCCAGTTTGGTCCAACCT
TTGCACTAGACACAGTCCATGTTGACCCTGTGATTCGTGAGAGCACCCCTGATGAGCTGCTTCG
CCCATCTGCAGGGCTGGCCCAGGAGCATCAGCCACCCCCAGCTGGGCTCCCTGCACTGGCCCTG
TCTCAGCTCTTTGACCCGGATGCCTGTGGGCGCAGGGTACAGACAGTAGTGCTTTATGGGACAG
TGGGTACAGGCAAGAGCACATTGGTGCGCAAAATGGTCCTGGACTGGTGTTATGGGCGACTGCC
AGCTTTTGAGCTACTCATCCCCTTCTCCTGTGAAGACCTGTCATCCCTGGGCCCTACCCCCACC
TCTTTGTGCCAACTTGTGGCCCAGCGCTATACTCCCCTGAAGGAGGTTCTGCCCCTGATGACTA
CTGCTGGGTCCCGCCTGCTGTTTGTGCTCCATGGCTTGGAGCGACTCAACCTTGACTTCCGCTT
GGCTGGTACGGGGCTTTGTAGTGATCCTGAGGAACCAGGGGCACCAGCTGCCATCATGGTCAAC
CTGCTGCGCAAATACATGCTGCCTGAGGCCAGCATTCTGGTGACAACCCGTCCCTCTGCCATTG
GCCGCATCCCCAGCAAGTATGTGGGCCGATATGGCGAGATCTGCGGCTTCTCTGATACCAACCT
GCAAAAGCTATATTTCCAGCTCCGTCTCAACCAGCCGGACTGTGGGGATGGCGCTGGGGGTGCG
GGTGTCTCAGCCACACCAGCTCAGCGGGACAACCTGATACAGATGCTCTCCCGAAATCTGGAAG
GGCACCACCAGATTGCCGCTGCCTGTTTCCTGCCCTCCTATTGCTGGCTTGTCTGTGCCACCTT
GCACTTCCTGCATGCCCCCACACCTGCCGGCCAGACCCTCACAAGCATCTATACCAGTTTCCTG
CGCCTCAATTTCAGTGGAGAAACGCTGGAGAGCACTGACCCCTCCAATTTGTCCCTGATGGCCT
ATGCAGCCCGAACCATGGGCAAGTTGGCCTATCAAGGGGTGTCCTCCCGCAAGACCTACTTCTC
TGAAGAGGATGTCCGAGGCTGCCTGGAGGCTGGCATCAAGACGGAGGAGGAGTTTCAGCTGCTG
CACGTCTTCCGTCGGGATGCCCTAAGGTTTTTTCTGGCCCCGTGCGTGGAGCCAGGCCACCTGG
GCACATTTGTGTTCACGGTGCCTGCCATGCAGGAATACCTGGCCGCCCTCTACATTGTGCTGGG
TTTGCATAAGACCACCCTGCAGCGGGTGGGCAAGGAAGTGACTGAGGTCGTGGGCCGTGTGGGA
GAGGACGTCAGCCTGGTACTGGGCATTGTAGCCAAGCTGCTGCCCCTGCGGATTCTGCCTCTGC
TCTTCAACTTGCTCAAGGTGGTTCCACGAGTGTTTGGGCGCATGGTAGATAAAAGCCGGGAGGC
AGTGGCCCAGGCCATGGTGCTGGAGATGTTCCGGGAGGAGGACTACTACAATGATGACGTTCTA
GACCAGATGGGTGCCAGTATCCTGGGTGTGGAGGGCCCCCGGCGCCACCCCGATGAGCCCCCCG
AGGATGAAGTCTTTGAGCTCTTCCCCATATTCATGGGGGGCCTTCTCTCTGCCCACAACCGTGC
TGTGTTGGCTCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCTTGGAAAATGCCCAGGCCATC
AAGAAGAAGCTGGGTAAACTGGGCCGGCAGGTGCTGCCCCCGTCGGAGCTTCTTGACCACCTCT
TCTTCCACTATGAGTTCCAGAACCAGCGCTTCTCTGCTGAAGTGCTCAGCTCCCTGCGCCAGCT
CAACTTGGCAGGTGTACGTATGACACCTCTTAAGTGCACAGTGGTGGCAGCTGTACTGGGCAGT
GGAAAACATGCCCTGGATGAGGTGAATTTAGCTTCCTGCCAGCTGGATCCTGCTGGGCTGCGCA
CTCTCATGCCCGTCTTTCTACGTGCTCGGAAGCTGGGCTTGCAGCTCAACAGCCTGGGCCCCGA
GGCCTGCAGGGACCTCCGAGATCTGCTACTGCATGACCAGTGCCAAATTACCACACTAAGGTTG
TCCAACAACCCACTGACTGCAGCGGGTGTTAGCCTGCTGATGGAGGGCCTAGTAGGAAACACCT
CACTGACACACCTGTCCCTGCTGCACACGGGCCTTGGGGATGAGGGGCTGGAGCTGCTGGCTGC
CCAGCTGGATCGCAATCAGCAGCTGCAGGAGCTGAATGTGGCCTACAATGGTGCTGGTGACACA
GCAGCCCTGGCCCTGGCCAAGGCTGCCTGGGAGCACCCTTCACTGGAGCTACTGCATCTCTACT
TCAATGAACTCAGCTCAGAGGGCCGTCAGATTCTTCGGGACCTGGGAGGCACTGCTGAAGGCAA
AGCCCGGGTTGTGGCATCGCTGACAGAGGGGACAGCAGTGTCGGAGTACTGGTCAGTGATTCTC
AGTGAAGTCCAGCGGAACCTCAACAGCTGGGATCGGGCCCGGGTTCGGCGCCACCTTGAGCTTC
TGCTGCGGGACCTCGAGGACAGCCGAGGCGCCACCCTTAATCCTTGGCGCAAGGCTCAGCTGCT
GCGAGTGGAGGGCGAGTTCAGGGCCCTCCTGGAGCAGCTAGAAGGCCCTGGAAGCTGAGACAGT
GGCAGCTGAGACCCGGCTGTGGGATCACTGGCTCCAAAACCCTTCCTCTGTGACCTCCCGGCTT
GTACTACTCCTTCTAGAATGATCCCTTCAAGGCTGGTGGCAAAGCAATGGTCACAGCTACGTGG
GTTGCCACCCCAGGACATGTCCAACTAAGTCTAGATTTCCAGGGTCAAATACGGTCCATTGATA
CCACGGTCTTAAAAATCGAGTGTGTCTCCTCTCCCTTTGGCCTGAAGAACTGAGGATGTGGCAT
TTGGGTGACTAGATTGCCATGTGGCATCACCACCAATTTTGATTCTCCCTCTGCTCAGAGAGCC
TCTGATGGTACCACCAAAAGGTTCACTTCTGAAACCTGCCCTGCTGGGGGTGTGCCATTCAGGA
GATGTGCTGGAGGGCCTCTCCTCCTGCCTGTGCTTACTGTGACACTGAGGACGCCCTCACGTTG
GTGCTTTCCCTCACACACATGCTCCTGTATCACACTGGTTCCCATGGCTTGGTGGCCCAAGGGC
CAGGTGTACCCAACTTGCTGCTATTAAAAAGCCTCTTCTACC

hide sequence

RefSeq Acc Id:

XM_013359979 ⟹ XP_013215433

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,187,661 - 101,199,769 (+)	NCBI
SpeTri2.0	NW_004936542	4,109,107 - 4,121,176 (+)	NCBI

Sequence:

show sequence

GCGGGCGGAGGCGGGCAGGAAGCGCAGCGTCTCGTCGCATCCAGCGAGCCTGGGACTCTGGGAG
CCAGCTGGAGACGCCGGCGTCCGTCCCGCCGGGCCGCGGTGACCAGGCGCGGGGGAACTGGAGA
GCAGGTGGTAAGTCTCCCAGGCTCTGACCTTCTCTCCCAGGATGAGGTGGGGCTGCTATTTGCC
CAGAGCTTCTTGGTACTCTGGTCTGGGAAGAACATCTCAGCCACCAGATGAGTGTCTCCCCTTC
CTGACACACTGGAGTTGGCCCCTTAAAGGGGAGCGTCCCCTTGAACCCCTTAGGGCCTTTATAC
GCCACCATGGAAGCTCAGCGGACAGTGCTTCCCCATCAGGAAGACATGGACAGGTGTTCCGGAG
CATCTCTGCAGCTGAAGCTATCCAGCGGCACCGCAGGAATCTGGCAGAGTGGTTCATCCGGCTG
CCCAGGGAGGAACGCCAGTTTGGTCCAACCTTTGCACTAGACACAGTCCATGTTGACCCTGTGA
TTCGTGAGAGCACCCCTGATGAGCTGCTTCGCCCATCTGCAGGGCTGGCCCAGGAGCATCAGCC
ACCCCCAGCTGGGCTCCCTGCACTGGCCCTGTCTCAGCTCTTTGACCCGGATGCCTGTGGGCGC
AGGGTACAGACAGTAGTGCTTTATGGGACAGTGGGTACAGGCAAGAGCACATTGGTGCGCAAAA
TGGTCCTGGACTGGTGTTATGGGCGACTGCCAGCTTTTGAGCTACTCATCCCCTTCTCCTGTGA
AGACCTGTCATCCCTGGGCCCTACCCCCACCTCTTTGTGCCAACTTGTGGCCCAGCGCTATACT
CCCCTGAAGGAGGTTCTGCCCCTGATGACTACTGCTGGGTCCCGCCTGCTGTTTGTGCTCCATG
GCTTGGAGCGACTCAACCTTGACTTCCGCTTGGCTGGTACGGGGCTTTGTAGTGATCCTGAGGA
ACCAGGGGCACCAGCTGCCATCATGGTCAACCTGCTGCGCAAATACATGCTGCCTGAGGCCAGC
ATTCTGGTGACAACCCGTCCCTCTGCCATTGGCCGCATCCCCAGCAAGTATGTGGGCCGATATG
GCGAGATCTGCGGCTTCTCTGATACCAACCTGCAAAAGCTATATTTCCAGCTCCGTCTCAACCA
GCCGGACTGTGGGGATGGCGCTGGGGGTGCGGGTGTCTCAGCCACACCAGCTCAGCGGGACAAC
CTGATACAGATGCTCTCCCGAAATCTGGAAGGGCACCACCAGATTGCCGCTGCCTGTTTCCTGC
CCTCCTATTGCTGGCTTGTCTGTGCCACCTTGCACTTCCTGCATGCCCCCACACCTGCCGGCCA
GACCCTCACAAGCATCTATACCAGTTTCCTGCGCCTCAATTTCAGTGGAGAAACGCTGGAGAGC
ACTGACCCCTCCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATC
AAGGGGTGTCCTCCCGCAAGACCTACTTCTCTGAAGAGGATGTCCGAGGCTGCCTGGAGGCTGG
CATCAAGACGGAGGAGGAGTTTCAGCTGCTGCACGTCTTCCGTCGGGATGCCCTAAGGTTTTTT
CTGGCCCCGTGCGTGGAGCCAGGCCACCTGGGCACATTTGTGTTCACGGTGCCTGCCATGCAGG
AATACCTGGCCGCCCTCTACATTGTGCTGGGTTTGCATAAGACCACCCTGCAGCGGGTGGGCAA
GGAAGTGACTGAGGTCGTGGGCCGTGTGGGAGAGGACGTCAGCCTGGTACTGGGCATTGTAGCC
AAGCTGCTGCCCCTGCGGATTCTGCCTCTGCTCTTCAACTTGCTCAAGGTGGTTCCACGAGTGT
TTGGGCGCATGGTAGATAAAAGCCGGGAGGCAGTGGCCCAGGCCATGGTGCTGGAGATGTTCCG
GGAGGAGGACTACTACAATGATGACGTTCTAGACCAGATGGGTGCCAGTATCCTGGGTGTGGAG
GGCCCCCGGCGCCACCCCGATGAGCCCCCCGAGGATGAAGTCTTTGAGCTCTTCCCCATATTCA
TGGGGGGCCTTCTCTCTGCCCACAACCGTGCTGTGTTGGCTCAGCTTGGCTGCCCCATCAAGAA
CCTGGATGCCTTGGAAAATGCCCAGGCCATCAAGAAGAAGCTGGGTAAACTGGGCCGGCAGGTG
CTGCCCCCGTCGGAGCTTCTTGACCACCTCTTCTTCCACTATGAGTTCCAGAACCAGCGCTTCT
CTGCTGAAGTGCTCAGCTCCCTGCGCCAGCTCAACTTGGCAGGTGTACGTATGACACCTCTTAA
GTGCACAGTGGTGGCAGCTGTACTGGGCAGTGGAAAACATGCCCTGGATGAGGTGAATTTAGCT
TCCTGCCAGCTGGATCCTGCTGGGCTGCGCACTCTCATGCCCGTCTTTCTACGTGCTCGGAAGC
TGGGCTTGCAGCTCAACAGCCTGGGCCCCGAGGCCTGCAGGGACCTCCGAGATCTGCTACTGCA
TGACCAGTGCCAAATTACCACACTAAGGTTGTCCAACAACCCACTGACTGCAGCGGGTGTTAGC
CTGCTGATGGAGGGCCTAGTAGGAAACACCTCACTGACACACCTGTCCCTGCTGCACACGGGCC
TTGGGGATGAGGGGCTGGAGCTGCTGGCTGCCCAGCTGGATCGCAATCAGCAGCTGCAGGAGCT
GAATGTGGCCTACAATGGTGCTGGTGACACAGCAGCCCTGGCCCTGGCCAAGGCTGCCTGGGAG
CACCCTTCACTGGAGCTACTGCATCTCTACTTCAATGAACTCAGCTCAGAGGGCCGTCAGATTC
TTCGGGACCTGGGAGGCACTGCTGAAGGCAAAGCCCGGGTTGTGGCATCGCTGACAGAGGGGAC
AGCAGTGTCGGAGTACTGGTCAGTGATTCTCAGTGAAGTCCAGCGGAACCTCAACAGCTGGGAT
CGGGCCCGGGTTCGGCGCCACCTTGAGCTTCTGCTGCGGGACCTCGAGGACAGCCGAGGCGCCA
CCCTTAATCCTTGGCGCAAGGCTCAGCTGCTGCGAGTGGAGGGCGAGTTCAGGGCCCTCCTGGA
GCAGCTAGAAGGCCCTGGAAGCTGAGACAGTGGCAGCTGAGACCCGGCTGTGGGATCACTGGCT
CCAAAACCCTTCCTCTGTGACCTCCCGGCTTGTACTACTCCTTCTAGAATGATCCCTTCAAGGC
TGGTGGCAAAGCAATGGTCACAGCTACGTGGGTTGCCACCCCAGGACATGTCCAACTAAGTCTA
GATTTCCAGGGTCAAATACGGTCCATTGATACCACGGTCTTAAAAATCGAGTGTGTCTCCTCTC
CCTTTGGCCTGAAGAACTGAGGATGTGGCATTTGGGTGACTAGATTGCCATGTGGCATCACCAC
CAATTTTGATTCTCCCTCTGCTCAGAGAGCCTCTGATGGTACCACCAAAAGGTTCACTTCTGAA
ACCTGCCCTGCTGGGGGTGTGCCATTCAGGAGATGTGCTGGAGGGCCTCTCCTCCTGCCTGTGC
TTACTGTGACACTGAGGACGCCCTCACGTTGGTGCTTTCCCTCACACACATGCTCCTGTATCAC
ACTGGTTCCCATGGCTTGGTGGCCCAAGGGCCAGGTGTACCCAACTTGCTGCTATTAAAAAGCC
TCTTCTACC

hide sequence

RefSeq Acc Id:

XM_013359981 ⟹ XP_013215435

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	101,189,653 - 101,199,769 (+)	NCBI
SpeTri2.0	NW_004936542	4,111,115 - 4,121,176 (+)	NCBI

Sequence:

show sequence

ATGAGGTGGGGCTGCTATTTGCCCAGAGCTTCTTGGTACTCTGGTCTGGGAAGAACATCTCAGC
CACCAGGGTCTTGATGGTGTCTCCAAGAGAGCTGGAATCCAGATACCAAGTGATCTAGTTCACT
TGTGGTTCTGGAGCTGTTGACCTTGGGCATGTCACCTCACTTCTCTGAACTTCCTTTTGCCCCA
TCCTAAAATGAGTGTCTCCCCTTCCTGACACACTGGAGTTGGCCCCTTAAAGGGGAGCGTCCCC
TTGAACCCCTTAGGGCCTTTATACGCCACCATGGAAGCTCAGCGGACAGTGCTTCCCCATCAGG
AAGACATGGACAGGTGTTCCGGAGCATCTCTGCAGCTGAAGCTATCCAGCGGCACCGCAGGAAT
CTGGCAGAGTGGTTCATCCGGCTGCCCAGGGAGGAACGCCAGTTTGGTCCAACCTTTGCACTAG
ACACAGTCCATGTTGACCCTGTGATTCGTGAGAGCACCCCTGATGAGCTGCTTCGCCCATCTGC
AGGGCTGGCCCAGGAGCATCAGCCACCCCCAGCTGGGCTCCCTGCACTGGCCCTGTCTCAGCTC
TTTGACCCGGATGCCTGTGGGCGCAGGGTACAGACAGTAGTGCTTTATGGGACAGTGGGTACAG
GCAAGAGCACATTGGTGCGCAAAATGGTCCTGGACTGGTGTTATGGGCGACTGCCAGCTTTTGA
GCTACTCATCCCCTTCTCCTGTGAAGACCTGTCATCCCTGGGCCCTACCCCCACCTCTTTGTGC
CAACTTGTGGCCCAGCGCTATACTCCCCTGAAGGAGGTTCTGCCCCTGATGACTACTGCTGGGT
CCCGCCTGCTGTTTGTGCTCCATGGCTTGGAGCGACTCAACCTTGACTTCCGCTTGGCTGGTAC
GGGGCTTTGTAGTGATCCTGAGGAACCAGGGGCACCAGCTGCCATCATGGTCAACCTGCTGCGC
AAATACATGCTGCCTGAGGCCAGCATTCTGGTGACAACCCGTCCCTCTGCCATTGGCCGCATCC
CCAGCAAGTATGTGGGCCGATATGGCGAGATCTGCGGCTTCTCTGATACCAACCTGCAAAAGCT
ATATTTCCAGCTCCGTCTCAACCAGCCGGACTGTGGGGATGGCGCTGGGGGTGCGGGTGTCTCA
GCCACACCAGCTCAGCGGGACAACCTGATACAGATGCTCTCCCGAAATCTGGAAGGGCACCACC
AGATTGCCGCTGCCTGTTTCCTGCCCTCCTATTGCTGGCTTGTCTGTGCCACCTTGCACTTCCT
GCATGCCCCCACACCTGCCGGCCAGACCCTCACAAGCATCTATACCAGTTTCCTGCGCCTCAAT
TTCAGTGGAGAAACGCTGGAGAGCACTGACCCCTCCAATTTGTCCCTGATGGCCTATGCAGCCC
GAACCATGGGCAAGTTGGCCTATCAAGGGGTGTCCTCCCGCAAGACCTACTTCTCTGAAGAGGA
TGTCCGAGGCTGCCTGGAGGCTGGCATCAAGACGGAGGAGGAGTTTCAGCTGCTGCACGTCTTC
CGTCGGGATGCCCTAAGGTTTTTTCTGGCCCCGTGCGTGGAGCCAGGCCACCTGGGCACATTTG
TGTTCACGGTGCCTGCCATGCAGGAATACCTGGCCGCCCTCTACATTGTGCTGGGTTTGCATAA
GACCACCCTGCAGCGGGTGGGCAAGGAAGTGACTGAGGTCGTGGGCCGTGTGGGAGAGGACGTC
AGCCTGGTACTGGGCATTGTAGCCAAGCTGCTGCCCCTGCGGATTCTGCCTCTGCTCTTCAACT
TGCTCAAGGTGGTTCCACGAGTGTTTGGGCGCATGGTAGATAAAAGCCGGGAGGCAGTGGCCCA
GGCCATGGTGCTGGAGATGTTCCGGGAGGAGGACTACTACAATGATGACGTTCTAGACCAGATG
GGTGCCAGTATCCTGGGTGTGGAGGGCCCCCGGCGCCACCCCGATGAGCCCCCCGAGGATGAAG
TCTTTGAGCTCTTCCCCATATTCATGGGGGGCCTTCTCTCTGCCCACAACCGTGCTGTGTTGGC
TCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCTTGGAAAATGCCCAGGCCATCAAGAAGAAG
CTGGGTAAACTGGGCCGGCAGGTGCTGCCCCCGTCGGAGCTTCTTGACCACCTCTTCTTCCACT
ATGAGTTCCAGAACCAGCGCTTCTCTGCTGAAGTGCTCAGCTCCCTGCGCCAGCTCAACTTGGC
AGGTGTACGTATGACACCTCTTAAGTGCACAGTGGTGGCAGCTGTACTGGGCAGTGGAAAACAT
GCCCTGGATGAGGTGAATTTAGCTTCCTGCCAGCTGGATCCTGCTGGGCTGCGCACTCTCATGC
CCGTCTTTCTACGTGCTCGGAAGCTGGGCTTGCAGCTCAACAGCCTGGGCCCCGAGGCCTGCAG
GGACCTCCGAGATCTGCTACTGCATGACCAGTGCCAAATTACCACACTAAGGTTGTCCAACAAC
CCACTGACTGCAGCGGGTGTTAGCCTGCTGATGGAGGGCCTAGTAGGAAACACCTCACTGACAC
ACCTGTCCCTGCTGCACACGGGCCTTGGGGATGAGGGGCTGGAGCTGCTGGCTGCCCAGCTGGA
TCGCAATCAGCAGCTGCAGGAGCTGAATGTGGCCTACAATGGTGCTGGTGACACAGCAGCCCTG
GCCCTGGCCAAGGCTGCCTGGGAGCACCCTTCACTGGAGCTACTGCATCTCTACTTCAATGAAC
TCAGCTCAGAGGGCCGTCAGATTCTTCGGGACCTGGGAGGCACTGCTGAAGGCAAAGCCCGGGT
TGTGGCATCGCTGACAGAGGGGACAGCAGTGTCGGAGTACTGGTCAGTGATTCTCAGTGAAGTC
CAGCGGAACCTCAACAGCTGGGATCGGGCCCGGGTTCGGCGCCACCTTGAGCTTCTGCTGCGGG
ACCTCGAGGACAGCCGAGGCGCCACCCTTAATCCTTGGCGCAAGGCTCAGCTGCTGCGAGTGGA
GGGCGAGTTCAGGGCCCTCCTGGAGCAGCTAGAAGGCCCTGGAAGCTGAGACAGTGGCAGCTGA
GACCCGGCTGTGGGATCACTGGCTCCAAAACCCTTCCTCTGTGACCTCCCGGCTTGTACTACTC
CTTCTAGAATGATCCCTTCAAGGCTGGTGGCAAAGCAATGGTCACAGCTACGTGGGTTGCCACC
CCAGGACATGTCCAACTAAGTCTAGATTTCCAGGGTCAAATACGGTCCATTGATACCACGGTCT
TAAAAATCGAGTGTGTCTCCTCTCCCTTTGGCCTGAAGAACTGAGGATGTGGCATTTGGGTGAC
TAGATTGCCATGTGGCATCACCACCAATTTTGATTCTCCCTCTGCTCAGAGAGCCTCTGATGGT
ACCACCAAAAGGTTCACTTCTGAAACCTGCCCTGCTGGGGGTGTGCCATTCAGGAGATGTGCTG
GAGGGCCTCTCCTCCTGCCTGTGCTTACTGTGACACTGAGGACGCCCTCACGTTGGTGCTTTCC
CTCACACACATGCTCCTGTATCACACTGGTTCCCATGGCTTGGTGGCCCAAGGGCCAGGTGTAC
CCAACTTGCTGCTATTAAAAAGCCTCTTCTACC

hide sequence

Protein Sequences


Protein RefSeqs	XP_013215431	(Get FASTA)	NCBI Sequence Viewer
	XP_013215433	(Get FASTA)	NCBI Sequence Viewer
	XP_013215435	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000012972.3
	ENSSTOP00000030193.1
GenBank Protein	KAG3286713	(Get FASTA)	NCBI Sequence Viewer
	KAG3286714	(Get FASTA)	NCBI Sequence Viewer
	KAG3286715	(Get FASTA)	NCBI Sequence Viewer
	KAG3286716	(Get FASTA)	NCBI Sequence Viewer
	KAG3286717	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013215431 ⟸ XM_013359977
- Peptide Label:	isoform X1
- UniProtKB:	A0A287D9H1 (UniProtKB/TrEMBL), I3MN04 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRWGCYLPRASWYSGLGRTSQPPDECLPFLTHWSWPLKGERPLEPLRAFIRHHGSSADSASPSG RHGQVFRSISAAEAIQRHRRNLAEWFIRLPREERQFGPTFALDTVHVDPVIRESTPDELLRPSA GLAQEHQPPPAGLPALALSQLFDPDACGRRVQTVVLYGTVGTGKSTLVRKMVLDWCYGRLPAFE LLIPFSCEDLSSLGPTPTSLCQLVAQRYTPLKEVLPLMTTAGSRLLFVLHGLERLNLDFRLAGT GLCSDPEEPGAPAAIMVNLLRKYMLPEASILVTTRPSAIGRIPSKYVGRYGEICGFSDTNLQKL YFQLRLNQPDCGDGAGGAGVSATPAQRDNLIQMLSRNLEGHHQIAAACFLPSYCWLVCATLHFL HAPTPAGQTLTSIYTSFLRLNFSGETLESTDPSNLSLMAYAARTMGKLAYQGVSSRKTYFSEED VRGCLEAGIKTEEEFQLLHVFRRDALRFFLAPCVEPGHLGTFVFTVPAMQEYLAALYIVLGLHK TTLQRVGKEVTEVVGRVGEDVSLVLGIVAKLLPLRILPLLFNLLKVVPRVFGRMVDKSREAVAQ AMVLEMFREEDYYNDDVLDQMGASILGVEGPRRHPDEPPEDEVFELFPIFMGGLLSAHNRAVLA QLGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFFHYEFQNQRFSAEVLSSLRQLNLA GVRMTPLKCTVVAAVLGSGKHALDEVNLASCQLDPAGLRTLMPVFLRARKLGLQLNSLGPEACR DLRDLLLHDQCQITTLRLSNNPLTAAGVSLLMEGLVGNTSLTHLSLLHTGLGDEGLELLAAQLD RNQQLQELNVAYNGAGDTAALALAKAAWEHPSLELLHLYFNELSSEGRQILRDLGGTAEGKARV VASLTEGTAVSEYWSVILSEVQRNLNSWDRARVRRHLELLLRDLEDSRGATLNPWRKAQLLRVE GEFRALLEQLEGPGS hide sequence

RefSeq Acc Id:	XP_013215433 ⟸ XM_013359979
- Peptide Label:	isoform X1
- UniProtKB:	A0A287D9H1 (UniProtKB/TrEMBL), I3MN04 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRWGCYLPRASWYSGLGRTSQPPDECLPFLTHWSWPLKGERPLEPLRAFIRHHGSSADSASPSG RHGQVFRSISAAEAIQRHRRNLAEWFIRLPREERQFGPTFALDTVHVDPVIRESTPDELLRPSA GLAQEHQPPPAGLPALALSQLFDPDACGRRVQTVVLYGTVGTGKSTLVRKMVLDWCYGRLPAFE LLIPFSCEDLSSLGPTPTSLCQLVAQRYTPLKEVLPLMTTAGSRLLFVLHGLERLNLDFRLAGT GLCSDPEEPGAPAAIMVNLLRKYMLPEASILVTTRPSAIGRIPSKYVGRYGEICGFSDTNLQKL YFQLRLNQPDCGDGAGGAGVSATPAQRDNLIQMLSRNLEGHHQIAAACFLPSYCWLVCATLHFL HAPTPAGQTLTSIYTSFLRLNFSGETLESTDPSNLSLMAYAARTMGKLAYQGVSSRKTYFSEED VRGCLEAGIKTEEEFQLLHVFRRDALRFFLAPCVEPGHLGTFVFTVPAMQEYLAALYIVLGLHK TTLQRVGKEVTEVVGRVGEDVSLVLGIVAKLLPLRILPLLFNLLKVVPRVFGRMVDKSREAVAQ AMVLEMFREEDYYNDDVLDQMGASILGVEGPRRHPDEPPEDEVFELFPIFMGGLLSAHNRAVLA QLGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFFHYEFQNQRFSAEVLSSLRQLNLA GVRMTPLKCTVVAAVLGSGKHALDEVNLASCQLDPAGLRTLMPVFLRARKLGLQLNSLGPEACR DLRDLLLHDQCQITTLRLSNNPLTAAGVSLLMEGLVGNTSLTHLSLLHTGLGDEGLELLAAQLD RNQQLQELNVAYNGAGDTAALALAKAAWEHPSLELLHLYFNELSSEGRQILRDLGGTAEGKARV VASLTEGTAVSEYWSVILSEVQRNLNSWDRARVRRHLELLLRDLEDSRGATLNPWRKAQLLRVE GEFRALLEQLEGPGS hide sequence

RefSeq Acc Id:	XP_013215435 ⟸ XM_013359981
- Peptide Label:	isoform X2
- UniProtKB:	I3MN04 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVLDWCYGRLPAFELLIPFSCEDLSSLGPTPTSLCQLVAQRYTPLKEVLPLMTTAGSRLLFVLH GLERLNLDFRLAGTGLCSDPEEPGAPAAIMVNLLRKYMLPEASILVTTRPSAIGRIPSKYVGRY GEICGFSDTNLQKLYFQLRLNQPDCGDGAGGAGVSATPAQRDNLIQMLSRNLEGHHQIAAACFL PSYCWLVCATLHFLHAPTPAGQTLTSIYTSFLRLNFSGETLESTDPSNLSLMAYAARTMGKLAY QGVSSRKTYFSEEDVRGCLEAGIKTEEEFQLLHVFRRDALRFFLAPCVEPGHLGTFVFTVPAMQ EYLAALYIVLGLHKTTLQRVGKEVTEVVGRVGEDVSLVLGIVAKLLPLRILPLLFNLLKVVPRV FGRMVDKSREAVAQAMVLEMFREEDYYNDDVLDQMGASILGVEGPRRHPDEPPEDEVFELFPIF MGGLLSAHNRAVLAQLGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFFHYEFQNQRF SAEVLSSLRQLNLAGVRMTPLKCTVVAAVLGSGKHALDEVNLASCQLDPAGLRTLMPVFLRARK LGLQLNSLGPEACRDLRDLLLHDQCQITTLRLSNNPLTAAGVSLLMEGLVGNTSLTHLSLLHTG LGDEGLELLAAQLDRNQQLQELNVAYNGAGDTAALALAKAAWEHPSLELLHLYFNELSSEGRQI LRDLGGTAEGKARVVASLTEGTAVSEYWSVILSEVQRNLNSWDRARVRRHLELLLRDLEDSRGA TLNPWRKAQLLRVEGEFRALLEQLEGPGS hide sequence

RefSeq Acc Id:

ENSSTOP00000012972 ⟸ ENSSTOT00000014480

RefSeq Acc Id:

ENSSTOP00000030193 ⟸ ENSSTOT00000036022

Protein Domains

NACHT

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000014477	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000014480.3	UniProtKB/TrEMBL
	ENSSTOT00000036022.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	NACHT_NTPase	UniProtKB/TrEMBL
	NLRX1_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
NCBI Gene	Nlrx1	ENTREZGENE
PANTHER	NACHT, LRR AND CARD DOMAINS-CONTAINING	UniProtKB/TrEMBL
	NLR FAMILY MEMBER X1	UniProtKB/TrEMBL
Pfam	LRR_6	UniProtKB/TrEMBL
	NACHT	UniProtKB/TrEMBL
	NLRX1_C	UniProtKB/TrEMBL
PROSITE	NACHT	UniProtKB/TrEMBL
SMART	LRR_RI	UniProtKB/TrEMBL
Superfamily-SCOP	RNI-like	UniProtKB/TrEMBL
UniProt	A0A287D9H1	ENTREZGENE, UniProtKB/TrEMBL
	I3MN04	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar