LOC100683076 (cytochrome c oxidase subunit 7B, mitochondrial-like) - Rat Genome Database

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Gene: LOC100683076 (cytochrome c oxidase subunit 7B, mitochondrial-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC100683076
Name: cytochrome c oxidase subunit 7B, mitochondrial-like
RGD ID: 12399357
Description: INVOLVED IN mitochondrial electron transport, cytochrome c to oxygen (inferred); oxidative phosphorylation (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial respirasome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cytochrome c oxidase subunit 7B, mitochondrial pseudogene
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11725,587,035 - 25,587,512 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1725,378,974 - 25,379,442 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01726,149,911 - 26,150,384 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11725,449,580 - 25,450,048 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01725,521,521 - 25,521,989 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01725,620,937 - 25,621,409 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC100683076
6 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038453380   ⟹   XP_038309308
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1725,378,974 - 25,379,442 (-)NCBI
RefSeq Acc Id: XM_038498651   ⟹   XP_038354579
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11725,449,580 - 25,450,048 (-)NCBI
RefSeq Acc Id: XM_038561221   ⟹   XP_038417149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01725,620,937 - 25,621,409 (-)NCBI
RefSeq Acc Id: XM_038625270   ⟹   XP_038481198
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01725,521,521 - 25,521,989 (-)NCBI
RefSeq Acc Id: XM_038691197   ⟹   XP_038547125
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01726,149,911 - 26,150,384 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038309308 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354579 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481198 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547125 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00845018582.1
Reference Protein Sequences
RefSeq Acc Id: XP_038354579   ⟸   XM_038498651
RefSeq Acc Id: XP_038481198   ⟸   XM_038625270
RefSeq Acc Id: XP_038547125   ⟸   XM_038691197
RefSeq Acc Id: XP_038309308   ⟸   XM_038453380
RefSeq Acc Id: XP_038417149   ⟸   XM_038561221


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845013291 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845023671.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.51.10 UniProtKB/TrEMBL
InterPro Cyt_c_oxidase_suVIIB UniProtKB/TrEMBL
  Cyt_c_oxidase_suVIIB_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC100683076 ENTREZGENE
PANTHER CYTOCHROME C OXIDASE SUBUNIT 7B, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR16716 UniProtKB/TrEMBL
Pfam COX7B UniProtKB/TrEMBL
Superfamily-SCOP SSF81423 UniProtKB/TrEMBL
UniProt A0A8I3NFG3_CANLF UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC100683076  cytochrome c oxidase subunit 7B, mitochondrial-like  LOC100683076  cytochrome c oxidase subunit 7B, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED