RIT2 (Ras like without CAAX 2) - Rat Genome Database

Name: RIT2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: RIT2 (Ras like without CAAX 2) Canis lupus familiaris

Analyze

Symbol:

RIT2

Name:

Ras like without CAAX 2

RGD ID:

12307784

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); MAPK cascade (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); intellectual disability (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendritic tree (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

GTP-binding protein Rit2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RIT2 (Ras like without CAAX 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Rit2 (Ras-like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rit2 (Ras-like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rit2 (Ras like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RIT2 (Ras like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rit2 (Ras like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RIT2 (Ras like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rit2 (Ras like without CAAX 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	47,597,746 - 48,064,202 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	47,597,731 - 48,081,048 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	47,014,511 - 47,480,592 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	47,553,975 - 48,020,921 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	47,553,798 - 48,020,921 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	47,256,327 - 47,722,627 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	47,292,605 - 47,760,797 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	47,581,850 - 48,049,236 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myocardial infarction (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenylate cyclase-activating G protein-coupled receptor signaling pathway (ISO)

intracellular signal transduction (IEA)

maintenance of protein location in cell (IEA)

MAPK cascade (ISO)

negative regulation of neuron projection development (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of neuron projection development (IEA)

positive regulation of transcription by RNA polymerase II (ISO)

Ras protein signal transduction (IEA)

regulation of calcium-mediated signaling (ISO)

regulation of Cdc42 protein signal transduction (ISO)

regulation of endocytosis (IEA)

regulation of ERK1 and ERK2 cascade (ISO)

regulation of protein phosphorylation (ISO)

signal transduction (IEA)

Cellular Component

cell body (ISO)

cytoplasm (ISO)

cytosol (IEA)

dendritic tree (ISO)

Golgi apparatus (IEA)

membrane (IEA)

membrane raft (IEA)

neuron projection (IEA)

nucleoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

Molecular Function

calmodulin binding (IEA)

chromatin binding (ISO)

GDP binding (IEA)

GTP binding (IEA)

GTPase activity (IEA)

identical protein binding (ISO)

nucleotide binding (IEA)

protein binding (ISO)

semaphorin receptor binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RIT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	47,597,746 - 48,064,202 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	47,597,731 - 48,081,048 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	47,014,511 - 47,480,592 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	47,553,975 - 48,020,921 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	47,553,798 - 48,020,921 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	47,256,327 - 47,722,627 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	47,292,605 - 47,760,797 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	47,581,850 - 48,049,236 (+)	NCBI		UU_Cfam_GSD_1.0

RIT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	42,743,227 - 43,115,685 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	42,743,227 - 43,115,691 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	40,323,192 - 40,695,650 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	38,577,190 - 38,949,655 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	38,577,190 - 38,949,655	NCBI
Celera	18	37,131,398 - 37,503,903 (-)	NCBI		Celera
Cytogenetic Map	18	q12.3	NCBI
HuRef	18	37,181,822 - 37,554,154 (-)	NCBI		HuRef
CHM1_1	18	40,246,782 - 40,622,669 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	42,935,007 - 43,307,454 (-)	NCBI		T2T-CHM13v2.0

Rit2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	31,107,367 - 31,450,181 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	31,106,542 - 31,450,343 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	30,974,314 - 31,317,128 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	30,973,489 - 31,317,290 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	31,133,968 - 31,476,782 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	31,117,324 - 31,460,138 (-)	NCBI		MGSCv36	mm8
Celera	18	31,458,250 - 31,802,813 (-)	NCBI		Celera
Cytogenetic Map	18	B1	NCBI
cM Map	18	17.69	NCBI

Rit2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	22,839,914 - 23,196,137 (-)	NCBI		GRCr8
mRatBN7.2	18	22,565,403 - 22,921,648 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	22,565,404 - 22,921,648 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	22,693,784 - 23,050,032 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	23,464,935 - 23,811,932 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	22,788,747 - 23,144,988 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	23,700,012 - 24,057,917 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	23,700,013 - 24,057,917 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	23,424,106 - 23,780,916 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	23,316,074 - 23,682,927 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	23,342,720 - 23,709,573 (-)	NCBI
Celera	18	22,336,942 - 22,688,745 (-)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

Rit2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	28,737,575 - 29,078,777 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	28,737,882 - 29,137,006 (-)	NCBI	ChiLan1.0	ChiLan1.0

RIT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	60,151,407 - 60,524,443 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	45,843,999 - 46,217,037 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	36,008,302 - 36,381,259 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	39,558,082 - 39,930,386 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	39,557,814 - 39,930,393 (-)	Ensembl	panpan1.1		panPan2

Rit2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	43,818,361 - 44,207,613 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936517	3,145,598 - 3,480,781 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936517	3,145,761 - 3,535,014 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RIT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	37,751,946 - 38,132,453 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666050	12,181,664 - 12,576,855 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rit2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	17,128,075 - 17,467,817 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624779	17,128,640 - 17,467,505 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RIT2
6999 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium								8
Low	3	3	7		6		10		4	1
Below cutoff	2	2	8	3		1	2		5	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005622856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014115446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022421434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_547597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005328603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005362443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005378481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005396947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005430152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000028057 ⟹ ENSCAFP00000026099

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	47,597,731 - 48,063,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000044906 ⟹ ENSCAFP00000036759

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	47,673,895 - 48,063,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000067356 ⟹ ENSCAFP00000046023

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	47,673,895 - 48,081,048 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000086999 ⟹ ENSCAFP00000049757

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	47,673,895 - 48,081,048 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006752 ⟹ ENSCAFP00845005368

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	47,553,798 - 48,020,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006775 ⟹ ENSCAFP00845005388

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	47,629,801 - 48,020,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006791 ⟹ ENSCAFP00845005403

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	47,629,801 - 48,020,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006800 ⟹ ENSCAFP00845005411

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	47,629,801 - 48,020,921 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006809 ⟹ ENSCAFP00845005420

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	47,629,801 - 47,920,054 (+)	Ensembl

RefSeq Acc Id:

XM_005622856 ⟹ XP_005622913

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	47,597,746 - 48,064,202 (+)	NCBI
Dog10K_Boxer_Tasha	7	47,014,528 - 47,480,592 (+)	NCBI

Sequence:

show sequence

TGGAGTGGAAACTTCTCTGCAATTTTTAGTACAGCTGCAGGTCTGGGTGATTCTAAACCAATCC
TCAAAAATGAAAGCGTCCTCTCCTGTGTCGGCACTCTGCTCGGGGAAGGTGTAGTGGGAGAAAG
TTCAGAGGCAGAGCAGCATGTGTCCTCAGGTAAAGAGATACTGGAATGAAGGAAATGAGACTTT
GGGAGGACTGAACAAAAACCACCAAACAATTTTAGAGCAATGACAATGCAGTTTATTAGCCATC
AGTTTCCTGATTATCACGACCCCACTATTGAAGATGCTTATAAGACCCAGGTTAGGATTGACAA
TGAGCCAGCTTACTTGGACATTTTGGACACTGCTGGTCAGGCAGAGTTCACAGCCATGCGGGAG
CAGTACATGCGAGGTGGGGAGGGATTCATCATCTGCTACTCTGTCACTGACCGCCAATCATTCC
AGGAAGCTGCCAAGTTTAAAGAGCTCATTTTTCAAGTCCGCCACACCTACGAAATTCCCCTGGT
GCTGGTGGGTAACAAAATCGACCTAGAACAATTCCGCCAGGTCTCTACAGAAGAAGGCTTGAGT
CTGGCCCGGGAATATAACTGTGCTTTTTTTGAGACCTCTGCGGCCCTCAGATTCTGCATTGATG
ATGCCTTTCATGGTCTCGTGAGAGAAATCCGCAAGAAGGAGTCCATGCCATCCTTGATGGAAAA
GAAACTGAAGAGAAAAGACAGCCTGTGGAAAAAGTTAAAAGGCTCATTGAAGAAGAAGAAAGAA
AACATGACATGATATCCTTGCTTCTAACTCCCTTATTCTTTCTCTGAATTTTATCAGTTGGACA
ATTCCAGATGTTGCATTCTGCTTCAATATTTTCTGTCTCTCTCTCTCTTTCTCTTTAAATATCT
GCCTATAGGTAAAAGCAAGATCTGCATAACTGTACCTCTTGAGATAGTTTTGTTTTGCCCTTAA
CAGTTGGATGGATTTTGTCAATCAGCCGGATATGCTGTTTAAGTTTTTACAATATATTACTAAA
TAAAATTGACATTCCAATTGCCTCATTTCCCTTTAAA

hide sequence

RefSeq Acc Id:

XM_014115446 ⟹ XP_013970921

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	47,597,746 - 48,064,202 (+)	NCBI
Dog10K_Boxer_Tasha	7	47,014,528 - 47,480,592 (+)	NCBI

Sequence:

show sequence

TGGAGTGGAAACTTCTCTGCAATTTTTAGTACAGCTGCAGGTCTGGGTGATTCTAAACCAATCC
TCAAAAATGAAAGCGTCCTCTCCTGTGTCGGCACTCTGCTCGGGGAAGGTGTAGTGGGAGAAAG
TTCAGAGGCAGAGCAGCATGTGTCCTCAGGTAAAGAGATACTGGAATGAAGGAAATGAGACTTT
GGGAGGACTGAACAAAAACCACCAAACAATTTTAGAGGACTGGACTCTGCCTCTGCATGAACAT
ACACCAAGGAAGCCAATACTATTCAGAGAACAGCTGAGAGCTAACAATGACAATGCAGTTTATT
AGCCATCAGTTTCCTGATTATCACGACCCCACTATTGAAGATGCTTATAAGACCCAGGTTAGGA
TTGACAATGAGCCAGCTTACTTGGACATTTTGGACACTGCTGGTCAGGCAGAGTTCACAGCCAT
GCGGGAGCAGTACATGCGAGGTGGGGAGGGATTCATCATCTGCTACTCTGTCACTGACCGCCAA
TCATTCCAGGAAGCTGCCAAGTTTAAAGAGCTCATTTTTCAAGTCCGCCACACCTACGAAATTC
CCCTGGTGCTGGTGGGTAACAAAATCGACCTAGAACAATTCCGCCAGGTCTCTACAGAAGAAGG
CTTGAGTCTGGCCCGGGAATATAACTGTGCTTTTTTTGAGACCTCTGCGGCCCTCAGATTCTGC
ATTGATGATGCCTTTCATGGTCTCGTGAGAGAAATCCGCAAGAAGGAGTCCATGCCATCCTTGA
TGGAAAAGAAACTGAAGAGAAAAGACAGCCTGTGGAAAAAGTTAAAAGGCTCATTGAAGAAGAA
GAAAGAAAACATGACATGATATCCTTGCTTCTAACTCCCTTATTCTTTCTCTGAATTTTATCAG
TTGGACAATTCCAGATGTTGCATTCTGCTTCAATATTTTCTGTCTCTCTCTCTCTTTCTCTTTA
AATATCTGCCTATAGGTAAAAGCAAGATCTGCATAACTGTACCTCTTGAGATAGTTTTGTTTTG
CCCTTAACAGTTGGATGGATTTTGTCAATCAGCCGGATATGCTGTTTAAGTTTTTACAATATAT
TACTAAATAAAATTGACATTCCAATTGCCTCATTTCCCTTTAAA

hide sequence

RefSeq Acc Id:

XM_038482015 ⟹ XP_038337943

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	47,331,823 - 47,722,627 (+)	NCBI

RefSeq Acc Id:

XM_038482016 ⟹ XP_038337944

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	47,256,327 - 47,722,627 (+)	NCBI

RefSeq Acc Id:

XM_038482017 ⟹ XP_038337945

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	47,256,344 - 47,722,627 (+)	NCBI

RefSeq Acc Id:

XM_038482018 ⟹ XP_038337946

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	47,256,344 - 47,722,627 (+)	NCBI

RefSeq Acc Id:

XM_038543396 ⟹ XP_038399324

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	47,657,822 - 48,049,236 (+)	NCBI

RefSeq Acc Id:

XM_038543397 ⟹ XP_038399325

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	47,581,850 - 48,049,236 (+)	NCBI

RefSeq Acc Id:

XM_038543398 ⟹ XP_038399326

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	47,581,867 - 48,049,236 (+)	NCBI

RefSeq Acc Id:

XM_038543399 ⟹ XP_038399327

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	47,581,867 - 48,049,236 (+)	NCBI

RefSeq Acc Id:

XM_038573478 ⟹ XP_038429406

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	7	47,014,511 - 47,480,592 (+)	NCBI

RefSeq Acc Id:

XM_038607504 ⟹ XP_038463432

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,369,716 - 47,760,797 (+)	NCBI

RefSeq Acc Id:

XM_038607505 ⟹ XP_038463433

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,292,605 - 47,760,797 (+)	NCBI

RefSeq Acc Id:

XM_038607506 ⟹ XP_038463434

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,292,622 - 47,760,797 (+)	NCBI

RefSeq Acc Id:

XM_038607507 ⟹ XP_038463435

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,292,622 - 47,760,797 (+)	NCBI

RefSeq Acc Id:

XM_038607508 ⟹ XP_038463436

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,329,262 - 47,760,797 (+)	NCBI

RefSeq Acc Id:

XM_038672193 ⟹ XP_038528121

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	47,629,592 - 48,020,921 (+)	NCBI

RefSeq Acc Id:

XM_038672194 ⟹ XP_038528122

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	47,553,975 - 48,020,921 (+)	NCBI

RefSeq Acc Id:

XM_038672195 ⟹ XP_038528123

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	47,553,992 - 48,020,921 (+)	NCBI

RefSeq Acc Id:

XM_038672196 ⟹ XP_038528124

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	47,553,992 - 48,020,921 (+)	NCBI

RefSeq Acc Id:

XM_547597 ⟹ XP_547597

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	47,673,678 - 48,064,202 (+)	NCBI
Dog10K_Boxer_Tasha	7	47,090,442 - 47,480,592 (+)	NCBI

Sequence:

show sequence

GGGGTGTAAAAGCCAGATTGTTATTGGAAGCAGTTGAAGTGGTTGCTATGAGACTCGCTGGAGC
AGAGGACCAGCCGCCAGCCCCACGCTGATGGTTCTTACCTCGTCCTAGACCTTTCTTTTGACAC
AGTTTCAGAGTTGCTCACTCTCTGAGCGAGCACCTGACGCGGGCGACTTTTTCCTTCCTGCGTT
TTCCTCCTCCCGTCTCTCGGGTAAGATGGATCTGGAAAACGAAGCGAGCTGCTCCCCCAGCCGC
GCAGCAGGCGGGTCCCGAGAGTACAAGGTGGTGATGCTGGGAGCTGGGGGAGTTGGGAAGAGCG
CAATGACAATGCAGTTTATTAGCCATCAGTTTCCTGATTATCACGACCCCACTATTGAAGATGC
TTATAAGACCCAGGTTAGGATTGACAATGAGCCAGCTTACTTGGACATTTTGGACACTGCTGGT
CAGGCAGAGTTCACAGCCATGCGGGAGCAGTACATGCGAGGTGGGGAGGGATTCATCATCTGCT
ACTCTGTCACTGACCGCCAATCATTCCAGGAAGCTGCCAAGTTTAAAGAGCTCATTTTTCAAGT
CCGCCACACCTACGAAATTCCCCTGGTGCTGGTGGGTAACAAAATCGACCTAGAACAATTCCGC
CAGGTCTCTACAGAAGAAGGCTTGAGTCTGGCCCGGGAATATAACTGTGCTTTTTTTGAGACCT
CTGCGGCCCTCAGATTCTGCATTGATGATGCCTTTCATGGTCTCGTGAGAGAAATCCGCAAGAA
GGAGTCCATGCCATCCTTGATGGAAAAGAAACTGAAGAGAAAAGACAGCCTGTGGAAAAAGTTA
AAAGGCTCATTGAAGAAGAAGAAAGAAAACATGACATGATATCCTTGCTTCTAACTCCCTTATT
CTTTCTCTGAATTTTATCAGTTGGACAATTCCAGATGTTGCATTCTGCTTCAATATTTTCTGTC
TCTCTCTCTCTTTCTCTTTAAATATCTGCCTATAGGTAAAAGCAAGATCTGCATAACTGTACCT
CTTGAGATAGTTTTGTTTTGCCCTTAACAGTTGGATGGATTTTGTCAATCAGCCGGATATGCTG
TTTAAGTTTTTACAATATATTACTAAATAAAATTGACATTCCAATTGCCTCATTTCCCTTTAAA

hide sequence

RefSeq Acc Id:

XR_005328603

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	47,652,602 - 47,722,262 (+)	NCBI

RefSeq Acc Id:

XR_005362443

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	47,979,272 - 48,048,871 (+)	NCBI

RefSeq Acc Id:

XR_005378481

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	7	47,410,673 - 47,480,227 (+)	NCBI

RefSeq Acc Id:

XR_005396947

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	47,690,770 - 47,760,432 (+)	NCBI

RefSeq Acc Id:

XR_005430152

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	47,950,888 - 48,020,556 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005622913	(Get FASTA)	NCBI Sequence Viewer
	XP_013970921	(Get FASTA)	NCBI Sequence Viewer
	XP_038337943	(Get FASTA)	NCBI Sequence Viewer
	XP_038337944	(Get FASTA)	NCBI Sequence Viewer
	XP_038337945	(Get FASTA)	NCBI Sequence Viewer
	XP_038337946	(Get FASTA)	NCBI Sequence Viewer
	XP_038399324	(Get FASTA)	NCBI Sequence Viewer
	XP_038399325	(Get FASTA)	NCBI Sequence Viewer
	XP_038399326	(Get FASTA)	NCBI Sequence Viewer
	XP_038399327	(Get FASTA)	NCBI Sequence Viewer
	XP_038429406	(Get FASTA)	NCBI Sequence Viewer
	XP_038463432	(Get FASTA)	NCBI Sequence Viewer
	XP_038463433	(Get FASTA)	NCBI Sequence Viewer
	XP_038463434	(Get FASTA)	NCBI Sequence Viewer
	XP_038463435	(Get FASTA)	NCBI Sequence Viewer
	XP_038463436	(Get FASTA)	NCBI Sequence Viewer
	XP_038528121	(Get FASTA)	NCBI Sequence Viewer
	XP_038528122	(Get FASTA)	NCBI Sequence Viewer
	XP_038528123	(Get FASTA)	NCBI Sequence Viewer
	XP_038528124	(Get FASTA)	NCBI Sequence Viewer
	XP_547597	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000026099.4
	ENSCAFP00000036759.2
	ENSCAFP00000046023.2
	ENSCAFP00000049757.1
	ENSCAFP00000069626.1
	ENSCAFP00030006143.1
	ENSCAFP00040009911.1
	ENSCAFP00040009931.1
	ENSCAFP00040009953.1
	ENSCAFP00845005368.1
	ENSCAFP00845005388.1
	ENSCAFP00845005403
	ENSCAFP00845005403.1
	ENSCAFP00845005411.1
	ENSCAFP00845005420.1

RefSeq Acc Id:	XP_013970921 ⟸ XM_014115446
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICY SVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAREYNCAFFETS AALRFCIDDAFHGLVREIRKKESMPSLMEKKLKRKDSLWKKLKGSLKKKKENMT hide sequence

RefSeq Acc Id:	XP_005622913 ⟸ XM_005622856
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICY SVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAREYNCAFFETS AALRFCIDDAFHGLVREIRKKESMPSLMEKKLKRKDSLWKKLKGSLKKKKENMT hide sequence

RefSeq Acc Id:	XP_547597 ⟸ XM_547597
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0QDI3 (UniProtKB/TrEMBL), A0A8C0QYV5 (UniProtKB/TrEMBL), A0A8I3MQY9 (UniProtKB/TrEMBL), A0A8C0RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLENEASCSPSRAAGGSREYKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQVRID NEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPL VLVGNKIDLEQFRQVSTEEGLSLAREYNCAFFETSAALRFCIDDAFHGLVREIRKKESMPSLME KKLKRKDSLWKKLKGSLKKKKENMT hide sequence

RefSeq Acc Id:

ENSCAFP00000036759 ⟸ ENSCAFT00000044906

RefSeq Acc Id:

ENSCAFP00000026099 ⟸ ENSCAFT00000028057

RefSeq Acc Id:

ENSCAFP00000049757 ⟸ ENSCAFT00000086999

RefSeq Acc Id:

ENSCAFP00000046023 ⟸ ENSCAFT00000067356

RefSeq Acc Id:	XP_038337944 ⟸ XM_038482016
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038337946 ⟸ XM_038482018
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038337945 ⟸ XM_038482017
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038337943 ⟸ XM_038482015
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038463433 ⟸ XM_038607505
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038463435 ⟸ XM_038607507
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038463434 ⟸ XM_038607506
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038463436 ⟸ XM_038607508
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038463432 ⟸ XM_038607504
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038528122 ⟸ XM_038672194
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528124 ⟸ XM_038672196
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528123 ⟸ XM_038672195
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528121 ⟸ XM_038672193
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0QDI3 (UniProtKB/TrEMBL), A0A8C0QYV5 (UniProtKB/TrEMBL), A0A8I3MQY9 (UniProtKB/TrEMBL), A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038429406 ⟸ XM_038573478
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399325 ⟸ XM_038543397
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399327 ⟸ XM_038543399
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399326 ⟸ XM_038543398
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399324 ⟸ XM_038543396
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0QDI3 (UniProtKB/TrEMBL), A0A8C0QYV5 (UniProtKB/TrEMBL), A0A8C0RC24 (UniProtKB/TrEMBL), A0A8I3MQY9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845005411 ⟸ ENSCAFT00845006800

RefSeq Acc Id:

ENSCAFP00845005368 ⟸ ENSCAFT00845006752

RefSeq Acc Id:

ENSCAFP00845005403 ⟸ ENSCAFT00845006791

RefSeq Acc Id:

ENSCAFP00845005388 ⟸ ENSCAFT00845006775

RefSeq Acc Id:

ENSCAFP00845005420 ⟸ ENSCAFT00845006809

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000017685	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030003712	UniProtKB/TrEMBL
	ENSCAFG00040006126	UniProtKB/TrEMBL
	ENSCAFG00845003778	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000028057.5	UniProtKB/TrEMBL
	ENSCAFT00000044906.4	UniProtKB/TrEMBL
	ENSCAFT00000067356.2	UniProtKB/TrEMBL
	ENSCAFT00000086999.2	UniProtKB/TrEMBL
	ENSCAFT00000108946.1	UniProtKB/TrEMBL
	ENSCAFT00030006985.1	UniProtKB/TrEMBL
	ENSCAFT00040011433.1	UniProtKB/TrEMBL
	ENSCAFT00040011454.1	UniProtKB/TrEMBL
	ENSCAFT00040011478.1	UniProtKB/TrEMBL
	ENSCAFT00845006752.1	UniProtKB/TrEMBL
	ENSCAFT00845006775.1	UniProtKB/TrEMBL
	ENSCAFT00845006791	ENTREZGENE
	ENSCAFT00845006791.1	UniProtKB/TrEMBL
	ENSCAFT00845006800.1	UniProtKB/TrEMBL
	ENSCAFT00845006809.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
	Small_GTPase_Ras-type	UniProtKB/TrEMBL
NCBI Gene	RIT2	ENTREZGENE
PANTHER	GTP-BINDING PROTEIN RIT2	UniProtKB/TrEMBL
	PTHR24070	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C0Q8W3_CANLF	UniProtKB/TrEMBL
	A0A8C0QDI3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QMP6_CANLF	UniProtKB/TrEMBL
	A0A8C0QYV5	ENTREZGENE
	A0A8C0RC24	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MN30_CANLF	UniProtKB/TrEMBL
	A0A8I3MQ86_CANLF	UniProtKB/TrEMBL
	A0A8I3MQY9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MW07_CANLF	UniProtKB/TrEMBL
	A0A8I3N6N3_CANLF	UniProtKB/TrEMBL
	A0A8P0SLS5_CANLF	UniProtKB/TrEMBL
	A0A8P0SRM9_CANLF	UniProtKB/TrEMBL
	A0A8P0TM96_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45601	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar